Proteínas da fração de membranas do fungo patogênico Paracoccidioides sp.

Detalhes bibliográficos
Autor(a) principal: Curcio, Juliana Santana de
Data de Publicação: 2014
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Repositório Institucional da UFG
dARK ID: ark:/38995/0013000005r2x
Texto Completo: http://repositorio.bc.ufg.br/tede/handle/tede/7655
Resumo: Paracoccidioides spp. represents thermodimorphic fungi that cause paracoccidioidomycosis, the most widespread systemic mycosis in Latin America. During the establishment of the infection, proteins located in cell membranes are responsible for many essential processes for pathogen survival as transport of nutrients, accession, signaling and energy production. Cell membranes are basically composed of a lipid bilayer with proteins associated. The proteins can be associated with the membrane through transmembrane domains, posttranslational added modifications or through electrostatic interactions. Therefore the knowledge of the constitution of the proteins of membranes is important to understand some processes developed by Paracoccidioides sp. for its growth and survival within the host. To this end, two techniques of separation and identification of proteins were employed. The first methodology used two-dimensional electrophoresis and mass spectrometry, where the extract of membranes proteins was obtained after steps of ultracentrifugation and the second methodology used liquid chromatography coupled with mass spectrometry, to this methodology three protocols were employed to obtain the extract of membranes proteins. The first methodology employed ultracentrifugation, and the second e third methodology used ultracentrifugation/sonication and ultracentrifugation with elevation of pH respectively. After these steps, the extract of membranes proteins was obtained through of ultracentrifugation and elevation of pH with sodium carbonate. Transmission Electron Microscopy (TEM) was performed to confirm the quality of the sample, a fraction enriched in cell membranes of Paracoccidioides sp.. Posteriorly the proteins obtained by standard methodology were subjected to tryptic digestion and analyzed by NanoUPLC-MSE.. In silico analyzes of the identified proteins were performed to determine the location and possible association of the proteins with the cell membranes. From total of proteins identified, one hundred thirty -three proteins were identified as belonging the cell membranes of Paracoccidioides sp.. Eighty-eight proteins showed at least one transmembrane domain and thirteen identified proteins showed a signal peptide at the N-terminus, beyond the transmembrane domain. Different forms of association of the proteins with membranes of Paracoccidioides sp. were detected, including domain transmembrane, GPI anchor, prenylation, myristoylation, palmitoylation. The most of the of integral membrane proteins identified in proteome were annotated in the genome of Paracoccidioides sp. Together these results show the establishment of an experimental protocol for the extraction of membranes proteins of Paracoccidioides spp., as well identify proteins from membrane fractions this fungus.
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spelling Soares, Célia Maria de Almeidahttp://lattes.cnpq.br/8539946335852637Soares, Célia Maria de AlmeidaBailão, Alexandre MeloBaeza, Lilian Cristianehttp://lattes.cnpq.br/9577753232871923Curcio, Juliana Santana de2017-08-07T15:54:46Z2014-02-21CURCIO, Juliana Santana de. Proteínas da fração de membranas do fungo patogênico Paracoccidioides sp. 2014. 117 f. Dissertação (Mestrado em Medicina Tropical e Saúde Publica) - Universidade Federal de Goiás, Goiânia, 2014.http://repositorio.bc.ufg.br/tede/handle/tede/7655ark:/38995/0013000005r2xParacoccidioides spp. represents thermodimorphic fungi that cause paracoccidioidomycosis, the most widespread systemic mycosis in Latin America. During the establishment of the infection, proteins located in cell membranes are responsible for many essential processes for pathogen survival as transport of nutrients, accession, signaling and energy production. Cell membranes are basically composed of a lipid bilayer with proteins associated. The proteins can be associated with the membrane through transmembrane domains, posttranslational added modifications or through electrostatic interactions. Therefore the knowledge of the constitution of the proteins of membranes is important to understand some processes developed by Paracoccidioides sp. for its growth and survival within the host. To this end, two techniques of separation and identification of proteins were employed. The first methodology used two-dimensional electrophoresis and mass spectrometry, where the extract of membranes proteins was obtained after steps of ultracentrifugation and the second methodology used liquid chromatography coupled with mass spectrometry, to this methodology three protocols were employed to obtain the extract of membranes proteins. The first methodology employed ultracentrifugation, and the second e third methodology used ultracentrifugation/sonication and ultracentrifugation with elevation of pH respectively. After these steps, the extract of membranes proteins was obtained through of ultracentrifugation and elevation of pH with sodium carbonate. Transmission Electron Microscopy (TEM) was performed to confirm the quality of the sample, a fraction enriched in cell membranes of Paracoccidioides sp.. Posteriorly the proteins obtained by standard methodology were subjected to tryptic digestion and analyzed by NanoUPLC-MSE.. In silico analyzes of the identified proteins were performed to determine the location and possible association of the proteins with the cell membranes. From total of proteins identified, one hundred thirty -three proteins were identified as belonging the cell membranes of Paracoccidioides sp.. Eighty-eight proteins showed at least one transmembrane domain and thirteen identified proteins showed a signal peptide at the N-terminus, beyond the transmembrane domain. Different forms of association of the proteins with membranes of Paracoccidioides sp. were detected, including domain transmembrane, GPI anchor, prenylation, myristoylation, palmitoylation. The most of the of integral membrane proteins identified in proteome were annotated in the genome of Paracoccidioides sp. Together these results show the establishment of an experimental protocol for the extraction of membranes proteins of Paracoccidioides spp., as well identify proteins from membrane fractions this fungus.Paracoccidioides spp. representa um gênero de fungos termodimórficos, agentes etiológicos da paracoccidioidomicose, a micose sistêmica mais comum na América Latina. Durante o processo infeccioso proteínas localizadas em membranas celulares são responsáveis por muitos processos essenciais para a sobrevivência do patógeno, como transporte de nutrientes, adesão, sinalização e produção de energia. Basicamente membranas celulares são constituídas de uma bicamada lipídica com proteínas associadas. As proteínas de membranas associam-se a bicamada lipídica através de domínios transmembrana, por adição de uma modificação pós traducional e por meio de interações eletrostáticas. Portanto, o conhecimento da constituição proteica das membranas de Paracoccidioides sp. permite entender alguns dos processos desenvolvidos pelo fungo para sobrevivência dentro do hospedeiro. Desta forma o presente trabalho teve como objetivo à determinação da metodologia para obtenção de proteínas de membranas e a consequente descrição dessas proteínas. Para este fim, duas técnicas de separação e identificação de proteínas foram empregadas. A primeira metodologia baseava-se em eletroforese bidimensional e espectrometria de massas onde o extrato proteico de membranas foi obtido após duas etapas de ultracentrifugação e a segunda metodologia utilizava cromatografia líquida acoplada à espectrometria de massas, para esta metodologia três protocolos foram empregados no intuito de obter extratos proteicos de membranas. O primeiro protocolo emprega ultracentrifugação e o segundo e terceiro protocolo empregava ultracentrifugação/sonicação e ultracentrifugação combinado com elevação do pH respectivamente. Após as etapas de padronização do protocolo, o extrato proteico de membranas foi obtido através de ultracentrifugação e solubilização com carbonato de sódio em pH elevado. A microscopia eletrônica de transmissão (MET) foi realizada para confirmar a qualidade da amostra enriquecida com a fração de membranas de Paracoccidioides sp.. Posteriormente o extrato proteico de membranas proveniente da metodologia padronizada foi submetido à digestão tríptica e analisado por NanoUPLC-MSE. Análises in silico das proteínas identificadas foram realizadas a fim de se determinar a localização destas proteínas e possíveis associações com as membranas. Do total de proteínas identificadas cento e trinta e três proteínas foram classificadas como pertencentes a membranas celulares de Paracoccidioides sp., oitenta e oito proteínas apresentaram ao menos um domínio transmembrana e treze proteínas, além de domínio transmembrana apresentaram um peptídeo sinal na porção N-terminal da proteína. Diferentes formas de associação com as membranas de Paracoccidioides sp. foram identificadas neste trabalho, incluindo domínio transmembrana, âncora de GPI, prenilação, palmitoilação e miristoilação. A maioria das proteínas integrais de membrana identificadas no proteoma já foram anotadas no genoma deste fungo. Juntos estes resultados demonstram o estabelecimento de um protocolo experimental para a extração de proteínas de membranas de Paracoccidioides spp., bem como identificam as proteínas de frações de membranas do fungo.Submitted by Franciele Moreira (francielemoreyra@gmail.com) on 2017-08-04T16:47:05Z No. of bitstreams: 2 Dissertação - Juliana Santana de Curcio - 2014.pdf: 2001377 bytes, checksum: 2f9ef22cd0a300cc93ee483fab0fb9c1 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5)Approved for entry into archive by Luciana Ferreira (lucgeral@gmail.com) on 2017-08-07T15:54:46Z (GMT) No. of bitstreams: 2 Dissertação - Juliana Santana de Curcio - 2014.pdf: 2001377 bytes, checksum: 2f9ef22cd0a300cc93ee483fab0fb9c1 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5)Made available in DSpace on 2017-08-07T15:54:46Z (GMT). No. of bitstreams: 2 Dissertação - Juliana Santana de Curcio - 2014.pdf: 2001377 bytes, checksum: 2f9ef22cd0a300cc93ee483fab0fb9c1 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5) Previous issue date: 2014-02-21Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPESapplication/pdfporUniversidade Federal de GoiásPrograma de Pós-graduação em Medicina Tropical e Saúde Publica (IPTSP)UFGBrasilInstituto de Patologia Tropical e Saúde Pública - IPTSP (RG)http://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessParacoccidioides sp.Proteínas de membranaMetodologiaMembrane proteinsMethodologyMICROBIOLOGIA::BIOLOGIA E FISIOLOGIA DOS MICROORGANISMOSProteínas da fração de membranas do fungo patogênico Paracoccidioides sp.Fraction proteins of membranes of the pathogenic fungus Paracoccidioides sp.info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesis6085308344741430434600600600600-7769011444564556288-54927947650793105412075167498588264571reponame:Repositório Institucional da UFGinstname:Universidade Federal de Goiás (UFG)instacron:UFGLICENSElicense.txtlicense.txttext/plain; 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dc.title.eng.fl_str_mv Proteínas da fração de membranas do fungo patogênico Paracoccidioides sp.
dc.title.alternative.eng.fl_str_mv Fraction proteins of membranes of the pathogenic fungus Paracoccidioides sp.
title Proteínas da fração de membranas do fungo patogênico Paracoccidioides sp.
spellingShingle Proteínas da fração de membranas do fungo patogênico Paracoccidioides sp.
Curcio, Juliana Santana de
Paracoccidioides sp.
Proteínas de membrana
Metodologia
Membrane proteins
Methodology
MICROBIOLOGIA::BIOLOGIA E FISIOLOGIA DOS MICROORGANISMOS
title_short Proteínas da fração de membranas do fungo patogênico Paracoccidioides sp.
title_full Proteínas da fração de membranas do fungo patogênico Paracoccidioides sp.
title_fullStr Proteínas da fração de membranas do fungo patogênico Paracoccidioides sp.
title_full_unstemmed Proteínas da fração de membranas do fungo patogênico Paracoccidioides sp.
title_sort Proteínas da fração de membranas do fungo patogênico Paracoccidioides sp.
author Curcio, Juliana Santana de
author_facet Curcio, Juliana Santana de
author_role author
dc.contributor.advisor1.fl_str_mv Soares, Célia Maria de Almeida
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/8539946335852637
dc.contributor.referee1.fl_str_mv Soares, Célia Maria de Almeida
dc.contributor.referee2.fl_str_mv Bailão, Alexandre Melo
dc.contributor.referee3.fl_str_mv Baeza, Lilian Cristiane
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/9577753232871923
dc.contributor.author.fl_str_mv Curcio, Juliana Santana de
contributor_str_mv Soares, Célia Maria de Almeida
Soares, Célia Maria de Almeida
Bailão, Alexandre Melo
Baeza, Lilian Cristiane
dc.subject.por.fl_str_mv Paracoccidioides sp.
Proteínas de membrana
Metodologia
topic Paracoccidioides sp.
Proteínas de membrana
Metodologia
Membrane proteins
Methodology
MICROBIOLOGIA::BIOLOGIA E FISIOLOGIA DOS MICROORGANISMOS
dc.subject.eng.fl_str_mv Membrane proteins
Methodology
dc.subject.cnpq.fl_str_mv MICROBIOLOGIA::BIOLOGIA E FISIOLOGIA DOS MICROORGANISMOS
description Paracoccidioides spp. represents thermodimorphic fungi that cause paracoccidioidomycosis, the most widespread systemic mycosis in Latin America. During the establishment of the infection, proteins located in cell membranes are responsible for many essential processes for pathogen survival as transport of nutrients, accession, signaling and energy production. Cell membranes are basically composed of a lipid bilayer with proteins associated. The proteins can be associated with the membrane through transmembrane domains, posttranslational added modifications or through electrostatic interactions. Therefore the knowledge of the constitution of the proteins of membranes is important to understand some processes developed by Paracoccidioides sp. for its growth and survival within the host. To this end, two techniques of separation and identification of proteins were employed. The first methodology used two-dimensional electrophoresis and mass spectrometry, where the extract of membranes proteins was obtained after steps of ultracentrifugation and the second methodology used liquid chromatography coupled with mass spectrometry, to this methodology three protocols were employed to obtain the extract of membranes proteins. The first methodology employed ultracentrifugation, and the second e third methodology used ultracentrifugation/sonication and ultracentrifugation with elevation of pH respectively. After these steps, the extract of membranes proteins was obtained through of ultracentrifugation and elevation of pH with sodium carbonate. Transmission Electron Microscopy (TEM) was performed to confirm the quality of the sample, a fraction enriched in cell membranes of Paracoccidioides sp.. Posteriorly the proteins obtained by standard methodology were subjected to tryptic digestion and analyzed by NanoUPLC-MSE.. In silico analyzes of the identified proteins were performed to determine the location and possible association of the proteins with the cell membranes. From total of proteins identified, one hundred thirty -three proteins were identified as belonging the cell membranes of Paracoccidioides sp.. Eighty-eight proteins showed at least one transmembrane domain and thirteen identified proteins showed a signal peptide at the N-terminus, beyond the transmembrane domain. Different forms of association of the proteins with membranes of Paracoccidioides sp. were detected, including domain transmembrane, GPI anchor, prenylation, myristoylation, palmitoylation. The most of the of integral membrane proteins identified in proteome were annotated in the genome of Paracoccidioides sp. Together these results show the establishment of an experimental protocol for the extraction of membranes proteins of Paracoccidioides spp., as well identify proteins from membrane fractions this fungus.
publishDate 2014
dc.date.issued.fl_str_mv 2014-02-21
dc.date.accessioned.fl_str_mv 2017-08-07T15:54:46Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.citation.fl_str_mv CURCIO, Juliana Santana de. Proteínas da fração de membranas do fungo patogênico Paracoccidioides sp. 2014. 117 f. Dissertação (Mestrado em Medicina Tropical e Saúde Publica) - Universidade Federal de Goiás, Goiânia, 2014.
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dc.identifier.dark.fl_str_mv ark:/38995/0013000005r2x
identifier_str_mv CURCIO, Juliana Santana de. Proteínas da fração de membranas do fungo patogênico Paracoccidioides sp. 2014. 117 f. Dissertação (Mestrado em Medicina Tropical e Saúde Publica) - Universidade Federal de Goiás, Goiânia, 2014.
ark:/38995/0013000005r2x
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dc.publisher.country.fl_str_mv Brasil
dc.publisher.department.fl_str_mv Instituto de Patologia Tropical e Saúde Pública - IPTSP (RG)
publisher.none.fl_str_mv Universidade Federal de Goiás
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http://repositorio.bc.ufg.br/tede/bitstreams/be98506c-fa57-4099-bf95-a76cf2a31cea/download
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repository.name.fl_str_mv Repositório Institucional da UFG - Universidade Federal de Goiás (UFG)
repository.mail.fl_str_mv tasesdissertacoes.bc@ufg.br
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