Variabilidade e estrutura genética espacial em Glossophaga soricina com ocorrência no cerrado

Detalhes bibliográficos
Autor(a) principal: Oprea, Monik
Data de Publicação: 2013
Tipo de documento: Tese
Idioma: por
Título da fonte: Repositório Institucional da UFG
Texto Completo: http://repositorio.bc.ufg.br/tede/handle/tede/3891
Resumo: Microsatellite markers are important tools for molecular ecology studies, particularly for bats, whose information is difficult to obtain through direct observations. In the first chapter, we conducted searches for scientific articles about the use of microsatellite markers in bats in order to evaluate the current knowledge about the genetic patterns and also to unravel sociological aspects of this knowledge. We found that the use of microsatellite markers to study bats is quite new and little spread. Many questions in molecular ecology can be addressed with a limited number of polymorphic markers, such as microsatellites. This will not only contribute to the knowledge of the species biology, but also to design effective strategies for conservation of bat species. In the second chapter, we report the development and characterization of ten microsatellite loci for the bat Glossophaga soricina isolated from a shotgun genomic library. Among 67 individuals, the number of alleles per locus ranged from 2 to 20, and the observed and expected heterozygosity ranged from 0.015 to 0.606 and from 0.016 to 0.915, respectively. The high combined probability of genetic identity (4.369x10-8) and probability of paternity exclusion (0.996) showed that the microsatellite loci are useful for population genetic structure and detailed parentage studies in natural populations of G. soricina. In the third chapter, we used the nine developed microsatellite loci and spatially explicit analysis to unravel population genetic structure and how landscape features affected genetic diversity of G. soricina at 17 localities in the Brazilian Cerrado. Our results showed that G. soricina populations already have higher inbreeding in fragmented landscapes in small geographic scales. Also, some pairs of populations showed genetic discontinuity as the outcome of landscape modification.
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spelling Telles, Mariana Pires de Camposhttp://lattes.cnpq.br/4648436798023532Collevatti, Rosane GarciaTelles, Mariana Pires de CamposDitchfield, Albert DavidNabout, João CarlosAguiar, Ludmilla Moura de SouzaMaciel, Natan Medeiroshttp://lattes.cnpq.br/5268174215557547Oprea, Monik2015-01-16T17:32:35Z2013-06-19OPREA, Monik. Variabilidade e estrutura genética espacial em Glossophaga soricina com ocorrência no cerrado. 2013. 114 f. Tese (Doutorado em Ecologia e Evolução) - Universidade Federal de Goiás, Goiânia, 2013.http://repositorio.bc.ufg.br/tede/handle/tede/3891Microsatellite markers are important tools for molecular ecology studies, particularly for bats, whose information is difficult to obtain through direct observations. In the first chapter, we conducted searches for scientific articles about the use of microsatellite markers in bats in order to evaluate the current knowledge about the genetic patterns and also to unravel sociological aspects of this knowledge. We found that the use of microsatellite markers to study bats is quite new and little spread. Many questions in molecular ecology can be addressed with a limited number of polymorphic markers, such as microsatellites. This will not only contribute to the knowledge of the species biology, but also to design effective strategies for conservation of bat species. In the second chapter, we report the development and characterization of ten microsatellite loci for the bat Glossophaga soricina isolated from a shotgun genomic library. Among 67 individuals, the number of alleles per locus ranged from 2 to 20, and the observed and expected heterozygosity ranged from 0.015 to 0.606 and from 0.016 to 0.915, respectively. The high combined probability of genetic identity (4.369x10-8) and probability of paternity exclusion (0.996) showed that the microsatellite loci are useful for population genetic structure and detailed parentage studies in natural populations of G. soricina. In the third chapter, we used the nine developed microsatellite loci and spatially explicit analysis to unravel population genetic structure and how landscape features affected genetic diversity of G. soricina at 17 localities in the Brazilian Cerrado. Our results showed that G. soricina populations already have higher inbreeding in fragmented landscapes in small geographic scales. Also, some pairs of populations showed genetic discontinuity as the outcome of landscape modification.Marcadores microssatélites são ferramentas importantes para estudos de ecologia molecular, principalmente para estudos sobre morcegos, cujas informações são difíceis de acessar através de observações diretas. No primeiro capítulo, buscamos artigos científicos sobre o uso de microssatélites em morcegos para avaliar o conhecimento atual dos padrões genéticos e revelar os aspectos sociológicos desse conhecimento. Nós observamos que o uso de marcadores microssatélites é relativamente recente e ainda pouco difundido. Muitas questões em ecologia molecular poderiam ser respondidas com um número limitado de marcadores moleculares, como os microssatélites. Isso não só contribuiria para o conhecimento da biologia, mas também para desenhar estratégias efetivas para conservação das espécies de morcegos. No segundo capítulo, apresentamos o desenvolvimento e caracterização de dez locos de microssatélites para o morcego Glossophaga soricina, isolados a partir de uma biblioteca shotgun. Foram analisados os genótipos de 67 indivíduos, sendo que o número de alelos por locos variou de 2 a 20, e a heterozigozidade observada e esperada variaram entre 0.015 a 0.606 e entre 0.016 a 0.915, respectivamente. A alta probabilidade de identidade genética (4.369x10-8) e a probabilidade de exclusão de paternidade (0.996) mostraram que os locos de microssatélites desenvolvidos são úteis para estudos de estrutura genética e paternidade em populações naturais de G. soricina. No terceiro capítulo, foram usados nove locos de microssatélites desenvolvidos, juntamente com análises espacialmente explícitas para acessar a estrutura genética, e verificar como as características da paisagem afetam a diversidade genética de G. soricina em 17 localidades do Cerrado brasileiro. Nossos resultados mostraram que populações de G. soricina já apresentam altos índices de endogamia em paisagens fragmentadas em pequenas escalas geográficas. Além disso, alguns pares de populações apresentaram descontinuidade genética como resultado da modificação da paisagem.Submitted by Erika Demachki (erikademachki@gmail.com) on 2015-01-16T17:09:06Z No. of bitstreams: 2 license_rdf: 23148 bytes, checksum: 9da0b6dfac957114c6a7714714b86306 (MD5) Tese - Monik Oprea - 2013.pdf: 1967380 bytes, checksum: 406bdd6925672cd697798a30f89bc4d5 (MD5)Approved for entry into archive by Erika Demachki (erikademachki@gmail.com) on 2015-01-16T17:32:35Z (GMT) No. of bitstreams: 2 license_rdf: 23148 bytes, checksum: 9da0b6dfac957114c6a7714714b86306 (MD5) Tese - Monik Oprea - 2013.pdf: 1967380 bytes, checksum: 406bdd6925672cd697798a30f89bc4d5 (MD5)Made available in DSpace on 2015-01-16T17:32:35Z (GMT). No. of bitstreams: 2 license_rdf: 23148 bytes, checksum: 9da0b6dfac957114c6a7714714b86306 (MD5) Tese - Monik Oprea - 2013.pdf: 1967380 bytes, checksum: 406bdd6925672cd697798a30f89bc4d5 (MD5) Previous issue date: 2013-06-19Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPESapplication/pdfhttp://repositorio.bc.ufg.br/tede/retrieve/14708/Tese%20-%20Monik%20Oprea%20-%202013.pdf.jpgporUniversidade Federal de GoiásPrograma de Pós-graduação em Ecologia e Evolução (ICB)UFGBrasilInstituto de Ciências Biológicas - ICB (RG)http://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessEcologia molecularGenética de populaçõesMorcegosBatsMolecular ecologyPopulation geneticsCIENCIAS BIOLOGICAS::ECOLOGIAVariabilidade e estrutura genética espacial em Glossophaga soricina com ocorrência no cerradoVariability and genetic structure in Glossophaga soricina from brazilian cerradoinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesis-5361682850774351271600600600600-387277211782737340432634996052953650022075167498588264571reponame:Repositório Institucional da UFGinstname:Universidade Federal de Goiás (UFG)instacron:UFGORIGINALTese - Monik Oprea - 2013.pdfTese - Monik Oprea - 2013.pdfapplication/pdf1967380http://repositorio.bc.ufg.br/tede/bitstreams/e53ecd4b-2201-4cf1-bc23-97a367ecc2a2/download406bdd6925672cd697798a30f89bc4d5MD52CC-LICENSElicense_urllicense_urltext/plain; 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dc.title.por.fl_str_mv Variabilidade e estrutura genética espacial em Glossophaga soricina com ocorrência no cerrado
dc.title.alternative.eng.fl_str_mv Variability and genetic structure in Glossophaga soricina from brazilian cerrado
title Variabilidade e estrutura genética espacial em Glossophaga soricina com ocorrência no cerrado
spellingShingle Variabilidade e estrutura genética espacial em Glossophaga soricina com ocorrência no cerrado
Oprea, Monik
Ecologia molecular
Genética de populações
Morcegos
Bats
Molecular ecology
Population genetics
CIENCIAS BIOLOGICAS::ECOLOGIA
title_short Variabilidade e estrutura genética espacial em Glossophaga soricina com ocorrência no cerrado
title_full Variabilidade e estrutura genética espacial em Glossophaga soricina com ocorrência no cerrado
title_fullStr Variabilidade e estrutura genética espacial em Glossophaga soricina com ocorrência no cerrado
title_full_unstemmed Variabilidade e estrutura genética espacial em Glossophaga soricina com ocorrência no cerrado
title_sort Variabilidade e estrutura genética espacial em Glossophaga soricina com ocorrência no cerrado
author Oprea, Monik
author_facet Oprea, Monik
author_role author
dc.contributor.advisor1.fl_str_mv Telles, Mariana Pires de Campos
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/4648436798023532
dc.contributor.advisor-co1.fl_str_mv Collevatti, Rosane Garcia
dc.contributor.referee1.fl_str_mv Telles, Mariana Pires de Campos
dc.contributor.referee2.fl_str_mv Ditchfield, Albert David
dc.contributor.referee3.fl_str_mv Nabout, João Carlos
dc.contributor.referee4.fl_str_mv Aguiar, Ludmilla Moura de Souza
dc.contributor.referee5.fl_str_mv Maciel, Natan Medeiros
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/5268174215557547
dc.contributor.author.fl_str_mv Oprea, Monik
contributor_str_mv Telles, Mariana Pires de Campos
Collevatti, Rosane Garcia
Telles, Mariana Pires de Campos
Ditchfield, Albert David
Nabout, João Carlos
Aguiar, Ludmilla Moura de Souza
Maciel, Natan Medeiros
dc.subject.por.fl_str_mv Ecologia molecular
Genética de populações
Morcegos
topic Ecologia molecular
Genética de populações
Morcegos
Bats
Molecular ecology
Population genetics
CIENCIAS BIOLOGICAS::ECOLOGIA
dc.subject.eng.fl_str_mv Bats
Molecular ecology
Population genetics
dc.subject.cnpq.fl_str_mv CIENCIAS BIOLOGICAS::ECOLOGIA
description Microsatellite markers are important tools for molecular ecology studies, particularly for bats, whose information is difficult to obtain through direct observations. In the first chapter, we conducted searches for scientific articles about the use of microsatellite markers in bats in order to evaluate the current knowledge about the genetic patterns and also to unravel sociological aspects of this knowledge. We found that the use of microsatellite markers to study bats is quite new and little spread. Many questions in molecular ecology can be addressed with a limited number of polymorphic markers, such as microsatellites. This will not only contribute to the knowledge of the species biology, but also to design effective strategies for conservation of bat species. In the second chapter, we report the development and characterization of ten microsatellite loci for the bat Glossophaga soricina isolated from a shotgun genomic library. Among 67 individuals, the number of alleles per locus ranged from 2 to 20, and the observed and expected heterozygosity ranged from 0.015 to 0.606 and from 0.016 to 0.915, respectively. The high combined probability of genetic identity (4.369x10-8) and probability of paternity exclusion (0.996) showed that the microsatellite loci are useful for population genetic structure and detailed parentage studies in natural populations of G. soricina. In the third chapter, we used the nine developed microsatellite loci and spatially explicit analysis to unravel population genetic structure and how landscape features affected genetic diversity of G. soricina at 17 localities in the Brazilian Cerrado. Our results showed that G. soricina populations already have higher inbreeding in fragmented landscapes in small geographic scales. Also, some pairs of populations showed genetic discontinuity as the outcome of landscape modification.
publishDate 2013
dc.date.issued.fl_str_mv 2013-06-19
dc.date.accessioned.fl_str_mv 2015-01-16T17:32:35Z
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dc.identifier.citation.fl_str_mv OPREA, Monik. Variabilidade e estrutura genética espacial em Glossophaga soricina com ocorrência no cerrado. 2013. 114 f. Tese (Doutorado em Ecologia e Evolução) - Universidade Federal de Goiás, Goiânia, 2013.
dc.identifier.uri.fl_str_mv http://repositorio.bc.ufg.br/tede/handle/tede/3891
identifier_str_mv OPREA, Monik. Variabilidade e estrutura genética espacial em Glossophaga soricina com ocorrência no cerrado. 2013. 114 f. Tese (Doutorado em Ecologia e Evolução) - Universidade Federal de Goiás, Goiânia, 2013.
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