Estrutura genética e sistema de cruzamento em Eugenia dysenterica DC. (Mvrtaceae)
Autor(a) principal: | |
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Data de Publicação: | 2014 |
Tipo de documento: | Tese |
Idioma: | por |
Título da fonte: | Repositório Institucional da UFG |
Texto Completo: | http://repositorio.bc.ufg.br/tede/handle/tede/3881 |
Resumo: | The genetic structure of a species corresponds to the amount of genetic variability and its distribution within and among local populations and individuals. The patterns of variability among individuals in a local population are highly dependent of mating system. The goal of this study was to evaluate the mating system, the diversity and genetic structure in populations of E. dysenterica in local and regional scale. The assessment of the mating system and the analysis of genetic structure at the local scale were performed in a population of Mimoso – GO and for the analysis of genetic structure at the regional scale were analyzed 23 natural populations of E. dysenterica derived from six Brazilian states (Goiás, Minas Gerais, Bahia, Mato Grosso, Tocantins and Piauí). For all studies seven polymorphic microsatellite loci were used. Considering the 20 families analyzed, the multilocus outcrossing rates (tm = 0.918) and single locus (ts = 0.797) were high and significant. From a total of 399 seeds evaluated, it was possible to determine the pollen donor to 218 seeds (55%) with confidence level of 90%, 174 seeds (44%) with confidence level of 95% and 65 seeds (16%) with confidence level of 99%. In 15 families evaluated were possible to verify the occurrence of multiple paternity, with the number of pollen donor per fruit ranged from one to three. The results presented show that the species E. dysenterica presents mixed mating system and that there is multiple paternity in this species. The intrapopulational spatial genetic structure was positive (R2 = 0.01646, p < 0.001), which was expected since species generally have spatial restriction to disperse. The spatial genetic structure was significant (Sp = 0.0143) and genetic neighborhood (Nb) was equal to 69.93 km. On average, about 30 individuals were analyzed by subpopulation for all loci. The average number of alleles per locus was equal to 9, the genetic diversity was high (0.725) and the observed frequency of heterozygotes (Ho) was 0.610. Were found 18 private alleles in 10 subpopulations. The results for the fixation index ((f) in the subpopulations ranged between -0.058 and 0.338, with an overall value of 0.162, indicating excess of homozygotes in relation to the expected under HWE. The genetic differentiation between subpopulations can be considered relatively high (FST = 0.161). The Mantel test indicates that the genetic divergence of 24 subpopulations evaluated is structured in geographic space (r = 0.427, p < 0.001), suggesting that the model of isolation by distance or stepping-stone are adequate to explain the spatial pattern of genetic divergence among subpopulations of E. dysenterica evaluated. |
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Telles, Mariana Pires de Camposhttp://lattes.cnpq.br/4648436798023532Collevatti, Rosane GarciaTelles, Mariana Pires de CamposMartins, KarinaFigueiredo, Lúcio Flávio de AlencarChaves, Lázaro JoséCoelho, Alexandre Siqueira Guedeshttp://lattes.cnpq.br/7632220212904480Barbosa, Ana Clara de Oliveira Ferraz2015-01-16T13:37:29Z2014-03-28BARBOSA, Ana Clara de Oliveira Ferraz. Estrutura genética e sistema de cruzamento em Eugenia dysenterica DC. (Mvrtaceae). 2014. 126 f. Tese (Doutorado em Genética e Melhoramento de Plantas) - Universidade Federal de Goiás, Goiânia, 2014.http://repositorio.bc.ufg.br/tede/handle/tede/3881The genetic structure of a species corresponds to the amount of genetic variability and its distribution within and among local populations and individuals. The patterns of variability among individuals in a local population are highly dependent of mating system. The goal of this study was to evaluate the mating system, the diversity and genetic structure in populations of E. dysenterica in local and regional scale. The assessment of the mating system and the analysis of genetic structure at the local scale were performed in a population of Mimoso – GO and for the analysis of genetic structure at the regional scale were analyzed 23 natural populations of E. dysenterica derived from six Brazilian states (Goiás, Minas Gerais, Bahia, Mato Grosso, Tocantins and Piauí). For all studies seven polymorphic microsatellite loci were used. Considering the 20 families analyzed, the multilocus outcrossing rates (tm = 0.918) and single locus (ts = 0.797) were high and significant. From a total of 399 seeds evaluated, it was possible to determine the pollen donor to 218 seeds (55%) with confidence level of 90%, 174 seeds (44%) with confidence level of 95% and 65 seeds (16%) with confidence level of 99%. In 15 families evaluated were possible to verify the occurrence of multiple paternity, with the number of pollen donor per fruit ranged from one to three. The results presented show that the species E. dysenterica presents mixed mating system and that there is multiple paternity in this species. The intrapopulational spatial genetic structure was positive (R2 = 0.01646, p < 0.001), which was expected since species generally have spatial restriction to disperse. The spatial genetic structure was significant (Sp = 0.0143) and genetic neighborhood (Nb) was equal to 69.93 km. On average, about 30 individuals were analyzed by subpopulation for all loci. The average number of alleles per locus was equal to 9, the genetic diversity was high (0.725) and the observed frequency of heterozygotes (Ho) was 0.610. Were found 18 private alleles in 10 subpopulations. The results for the fixation index ((f) in the subpopulations ranged between -0.058 and 0.338, with an overall value of 0.162, indicating excess of homozygotes in relation to the expected under HWE. The genetic differentiation between subpopulations can be considered relatively high (FST = 0.161). The Mantel test indicates that the genetic divergence of 24 subpopulations evaluated is structured in geographic space (r = 0.427, p < 0.001), suggesting that the model of isolation by distance or stepping-stone are adequate to explain the spatial pattern of genetic divergence among subpopulations of E. dysenterica evaluated.A estrutura genética de uma espécie corresponde à quantidade da variabilidade genética e sua distribuição dentro e entre populações locais e indivíduos. Os padrões de variabilidade entre indivíduos em uma população local são altamente dependentes do sistema de cruzamento. O objetivo geral do trabalho foi avaliar o sistema de cruzamento, a diversidade e a estrutura genética em populações de E. dysenterica, em escala local e regional. A avaliação do sistema de cruzamento e a análise da estrutura genética intrapopulacional foram realizadas em uma população do município de Mimoso – GO e para a estrutura genética interpopulacional foram analisadas 23 subpopulações naturais de E. dysenterica oriundas de seis estados brasileiros. Para todos os estudos foram utilizados sete locos microssatélites polimórficos. Considerando as 20 famílias analisadas, as taxas de fecundação cruzada multiloco (tm = 0,918) e uniloco (ts = 0,797) foram altas. De um total de 399 sementes avaliadas, foi possível determinar o doador de pólen para 218 sementes (55%) com confiança de 90%, 174 sementes (44%) com confiança de 95% e 65 sementes (16%) com confiança de 99%. Em 15 famílias avaliadas foi possível verificar a ocorrência de paternidade múltipla, sendo que o número de doador de pólen por fruto variou de um a três. Os resultados apresentados revelam que a espécie E. dysenterica apresenta sistema de cruzamento misto e que existe paternidade múltipla nessa espécie. A estrutura genética espacial intrapopulacional foi positiva (R2 = 0,01646, p < 0,001), o que era esperado, uma vez que espécies vegetais geralmente possuem restrição espacial para se dispersarem. A estrutura genética espacial foi significativa (Sp = 0,0143) e a vizinhança genética (Nb) foi igual a 69,93 km. Em média, foram analisados aproximadamente 30 indivíduos por subpopulação para todos os locos. O número médio de alelos por loco foi igual a 9, a diversidade genética foi alta (0,725) e a frequência observada de heterozigotos (Ho) foi 0,610. Foram encontrados 18 alelos privados em 10 subpopulações. Os resultados obtidos para o índice de fixação (f) variaram nas subpopulações entre -0,058 e 0,338, com valor global igual a 0,162, indicando excesso de homozigotos em relação às frequências esperadas sob EHW. A diferenciação genética entre as subpopulações pode ser considerada relativamente alta ( P = 0,161). O teste de Mantel indica que a divergência genética das 23 subpopulações avaliadas está estruturada no espaço geográfico (r = 0,427; p < 0,001), sugerindo que o modelo de isolamento-por-distância ou stepping-stone são adequados para explicar o padrão espacial de divergência genética entre as subpopulações de E. dysenterica avaliadas.Submitted by Luciana Ferreira (lucgeral@gmail.com) on 2015-01-16T13:27:44Z No. of bitstreams: 2 license_rdf: 23148 bytes, checksum: 9da0b6dfac957114c6a7714714b86306 (MD5) Tese - Ana Clara de Oliveira Ferraz Barbosa - 2014.pdf: 7503883 bytes, checksum: 4ba2274e8cf2c886f8484854e4224c41 (MD5)Approved for entry into archive by Luciana Ferreira (lucgeral@gmail.com) on 2015-01-16T13:37:29Z (GMT) No. of bitstreams: 2 license_rdf: 23148 bytes, checksum: 9da0b6dfac957114c6a7714714b86306 (MD5) Tese - Ana Clara de Oliveira Ferraz Barbosa - 2014.pdf: 7503883 bytes, checksum: 4ba2274e8cf2c886f8484854e4224c41 (MD5)Made available in DSpace on 2015-01-16T13:37:29Z (GMT). No. of bitstreams: 2 license_rdf: 23148 bytes, checksum: 9da0b6dfac957114c6a7714714b86306 (MD5) Tese - Ana Clara de Oliveira Ferraz Barbosa - 2014.pdf: 7503883 bytes, checksum: 4ba2274e8cf2c886f8484854e4224c41 (MD5) Previous issue date: 2014-03-28Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPESFundação de Amparo à Pesquisa do Estado de Goiás - FAPEGapplication/pdfhttp://repositorio.bc.ufg.br/tede/retrieve/14694/Tese%20-%20Ana%20Clara%20de%20Oliveira%20Ferraz%20Barbosa%20-%202014.pdf.jpgporUniversidade Federal de GoiásPrograma de Pós-graduação em Genetica e Melhoramentode PlantasUFGBrasilEscola de Agronomia e Engenharia de Alimentos - EAEA (RG)http://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessCagaiteiraDiversidadeEstrutura genéticaMicrossatélitesSistema mistoCagaiteiraDiversityGenetic structureMicrosatellitesMixed systemGENETICA::GENETICA VEGETALEstrutura genética e sistema de cruzamento em Eugenia dysenterica DC. (Mvrtaceae)Genetic structure and mating system in Eugenia dysenterica DC. 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dc.title.por.fl_str_mv |
Estrutura genética e sistema de cruzamento em Eugenia dysenterica DC. (Mvrtaceae) |
dc.title.alternative.eng.fl_str_mv |
Genetic structure and mating system in Eugenia dysenterica DC. (Myrtaceae) |
title |
Estrutura genética e sistema de cruzamento em Eugenia dysenterica DC. (Mvrtaceae) |
spellingShingle |
Estrutura genética e sistema de cruzamento em Eugenia dysenterica DC. (Mvrtaceae) Barbosa, Ana Clara de Oliveira Ferraz Cagaiteira Diversidade Estrutura genética Microssatélites Sistema misto Cagaiteira Diversity Genetic structure Microsatellites Mixed system GENETICA::GENETICA VEGETAL |
title_short |
Estrutura genética e sistema de cruzamento em Eugenia dysenterica DC. (Mvrtaceae) |
title_full |
Estrutura genética e sistema de cruzamento em Eugenia dysenterica DC. (Mvrtaceae) |
title_fullStr |
Estrutura genética e sistema de cruzamento em Eugenia dysenterica DC. (Mvrtaceae) |
title_full_unstemmed |
Estrutura genética e sistema de cruzamento em Eugenia dysenterica DC. (Mvrtaceae) |
title_sort |
Estrutura genética e sistema de cruzamento em Eugenia dysenterica DC. (Mvrtaceae) |
author |
Barbosa, Ana Clara de Oliveira Ferraz |
author_facet |
Barbosa, Ana Clara de Oliveira Ferraz |
author_role |
author |
dc.contributor.advisor1.fl_str_mv |
Telles, Mariana Pires de Campos |
dc.contributor.advisor1Lattes.fl_str_mv |
http://lattes.cnpq.br/4648436798023532 |
dc.contributor.advisor-co1.fl_str_mv |
Collevatti, Rosane Garcia |
dc.contributor.referee1.fl_str_mv |
Telles, Mariana Pires de Campos |
dc.contributor.referee2.fl_str_mv |
Martins, Karina |
dc.contributor.referee3.fl_str_mv |
Figueiredo, Lúcio Flávio de Alencar |
dc.contributor.referee4.fl_str_mv |
Chaves, Lázaro José |
dc.contributor.referee5.fl_str_mv |
Coelho, Alexandre Siqueira Guedes |
dc.contributor.authorLattes.fl_str_mv |
http://lattes.cnpq.br/7632220212904480 |
dc.contributor.author.fl_str_mv |
Barbosa, Ana Clara de Oliveira Ferraz |
contributor_str_mv |
Telles, Mariana Pires de Campos Collevatti, Rosane Garcia Telles, Mariana Pires de Campos Martins, Karina Figueiredo, Lúcio Flávio de Alencar Chaves, Lázaro José Coelho, Alexandre Siqueira Guedes |
dc.subject.por.fl_str_mv |
Cagaiteira Diversidade Estrutura genética Microssatélites Sistema misto |
topic |
Cagaiteira Diversidade Estrutura genética Microssatélites Sistema misto Cagaiteira Diversity Genetic structure Microsatellites Mixed system GENETICA::GENETICA VEGETAL |
dc.subject.eng.fl_str_mv |
Cagaiteira Diversity Genetic structure Microsatellites Mixed system |
dc.subject.cnpq.fl_str_mv |
GENETICA::GENETICA VEGETAL |
description |
The genetic structure of a species corresponds to the amount of genetic variability and its distribution within and among local populations and individuals. The patterns of variability among individuals in a local population are highly dependent of mating system. The goal of this study was to evaluate the mating system, the diversity and genetic structure in populations of E. dysenterica in local and regional scale. The assessment of the mating system and the analysis of genetic structure at the local scale were performed in a population of Mimoso – GO and for the analysis of genetic structure at the regional scale were analyzed 23 natural populations of E. dysenterica derived from six Brazilian states (Goiás, Minas Gerais, Bahia, Mato Grosso, Tocantins and Piauí). For all studies seven polymorphic microsatellite loci were used. Considering the 20 families analyzed, the multilocus outcrossing rates (tm = 0.918) and single locus (ts = 0.797) were high and significant. From a total of 399 seeds evaluated, it was possible to determine the pollen donor to 218 seeds (55%) with confidence level of 90%, 174 seeds (44%) with confidence level of 95% and 65 seeds (16%) with confidence level of 99%. In 15 families evaluated were possible to verify the occurrence of multiple paternity, with the number of pollen donor per fruit ranged from one to three. The results presented show that the species E. dysenterica presents mixed mating system and that there is multiple paternity in this species. The intrapopulational spatial genetic structure was positive (R2 = 0.01646, p < 0.001), which was expected since species generally have spatial restriction to disperse. The spatial genetic structure was significant (Sp = 0.0143) and genetic neighborhood (Nb) was equal to 69.93 km. On average, about 30 individuals were analyzed by subpopulation for all loci. The average number of alleles per locus was equal to 9, the genetic diversity was high (0.725) and the observed frequency of heterozygotes (Ho) was 0.610. Were found 18 private alleles in 10 subpopulations. The results for the fixation index ((f) in the subpopulations ranged between -0.058 and 0.338, with an overall value of 0.162, indicating excess of homozygotes in relation to the expected under HWE. The genetic differentiation between subpopulations can be considered relatively high (FST = 0.161). The Mantel test indicates that the genetic divergence of 24 subpopulations evaluated is structured in geographic space (r = 0.427, p < 0.001), suggesting that the model of isolation by distance or stepping-stone are adequate to explain the spatial pattern of genetic divergence among subpopulations of E. dysenterica evaluated. |
publishDate |
2014 |
dc.date.issued.fl_str_mv |
2014-03-28 |
dc.date.accessioned.fl_str_mv |
2015-01-16T13:37:29Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/doctoralThesis |
format |
doctoralThesis |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
BARBOSA, Ana Clara de Oliveira Ferraz. Estrutura genética e sistema de cruzamento em Eugenia dysenterica DC. (Mvrtaceae). 2014. 126 f. Tese (Doutorado em Genética e Melhoramento de Plantas) - Universidade Federal de Goiás, Goiânia, 2014. |
dc.identifier.uri.fl_str_mv |
http://repositorio.bc.ufg.br/tede/handle/tede/3881 |
identifier_str_mv |
BARBOSA, Ana Clara de Oliveira Ferraz. Estrutura genética e sistema de cruzamento em Eugenia dysenterica DC. (Mvrtaceae). 2014. 126 f. Tese (Doutorado em Genética e Melhoramento de Plantas) - Universidade Federal de Goiás, Goiânia, 2014. |
url |
http://repositorio.bc.ufg.br/tede/handle/tede/3881 |
dc.language.iso.fl_str_mv |
por |
language |
por |
dc.relation.program.fl_str_mv |
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