Filogeografia em áreas abertas da América do Sul: origem e diversificação de linhagens de Scinax squalirostris (Anura, Hylidae)
Autor(a) principal: | |
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Data de Publicação: | 2012 |
Tipo de documento: | Dissertação |
Idioma: | por |
Título da fonte: | Repositório Institucional da UFG |
dARK ID: | ark:/38995/0013000008q1c |
Texto Completo: | http://repositorio.bc.ufg.br/tede/handle/tede/6085 |
Resumo: | (Phylogeography of Scinax squalirostris). In this work we used 175 individuals of Scinax squalirostris from 26 localities in the Brazilian states of Minas Gerais, São Paulo, Goiás, Mato Grosso do Sul, Santa Catarina, Rio Grande do Sul, Parana, and Distrito Federal, as well as individuals from Paraguay, Uruguay and Argentina. Three mitochondrial (cytb, 12S and CO1) and one nuclear (RAG-1) gene fragments were sequenced. The determination of the phylogenetic structured populations and the relationships among them were made under phylogenetic analyses based on Bayesian statistical methods. The most parsimonious relationship among haplotypes was made under the method of median-joining network. The delineation of the hypothetical operational taxonomic units was made under DNA mini-barcoding procedures, combined with genetic and phylogenetic evidence. In addition, we performed population structure tests of, gene flow and changes in population sizes. Finally, times of divergence among genealogical lineages were estimated by relaxed molecular clock procedures. Considering the phylogenetic species concept, there are two possible scenarios for the taxonomic lineages of the cryptic complex named Scinax squalirostris. In the first scenario, there are two possible species: one with tropical and other with subtropical/temperate distributions, respectively. The second scenario points to the existence of at least nine species: one in the Pampas, one in the Chaco and the remaining seven isolated in 'sky-islands' from the Cerrado and Atlantic Forest domains. The first cladogenetic event of the lineages dates from the Upper Miocene, approximately 7.5 million years ago. This may have occurred by the last contraction of Paranaense Sea. During this period, new suitable areas for S. squalirostris emerged, leading to the clades belonging to tropical and subtropical/temperate zones diversification, and it would be consistent with the first taxonomic scenario. The XI diversification within these two major clades occurred in the transition between the late Tertiary and early Quaternary. The current distribution of S. squalirostris in the tropical zone probably should be linked to climatic and geological changes that occurred in the transition between the Pliocene and Pleistocene. During the Quaternary glaciations, the grasslands have undergone expansion (periods during glaciations) and retraction (during interglacials). When the temperature and moisture increased in the Late Holocene, occurred retraction of the grasslands in favor to the expansion of forests and tree/shrub savannas. Thus, the suitable habitats to S. squalirostris were restricted to the grasslands at altitudes greater than 800m in the tropics. The cycles of grasslands isolation on islands must have influenced the recent diversification of the local clades of S. squalirostris. |
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Maciel, Natan Medeiroshttp://lattes.cnpq.br/2116561844584292Collevatti, Rosane Garciahttp://lattes.cnpq.br/9979596352166630Maciel, Natan MedeirosDiniz Filho, José Alexandre FelizolaGiugliano, Lilian Gimeneshttp://lattes.cnpq.br/9143426558460108Magalhães, Rafael Félix de2016-09-01T15:17:59Z2012-04-27MAGALHÃES, R. F. Filogeografia em áreas abertas da América do Sul: origem e diversificação de linhagens de Scinax squalirostris (Anura, Hylidae). 2012. 98 f. Dissertação (Mestrado em Ecologia e Evolução) - Universidade Federal de Goiás, Goiânia, 2012.http://repositorio.bc.ufg.br/tede/handle/tede/6085ark:/38995/0013000008q1c(Phylogeography of Scinax squalirostris). In this work we used 175 individuals of Scinax squalirostris from 26 localities in the Brazilian states of Minas Gerais, São Paulo, Goiás, Mato Grosso do Sul, Santa Catarina, Rio Grande do Sul, Parana, and Distrito Federal, as well as individuals from Paraguay, Uruguay and Argentina. Three mitochondrial (cytb, 12S and CO1) and one nuclear (RAG-1) gene fragments were sequenced. The determination of the phylogenetic structured populations and the relationships among them were made under phylogenetic analyses based on Bayesian statistical methods. The most parsimonious relationship among haplotypes was made under the method of median-joining network. The delineation of the hypothetical operational taxonomic units was made under DNA mini-barcoding procedures, combined with genetic and phylogenetic evidence. In addition, we performed population structure tests of, gene flow and changes in population sizes. Finally, times of divergence among genealogical lineages were estimated by relaxed molecular clock procedures. Considering the phylogenetic species concept, there are two possible scenarios for the taxonomic lineages of the cryptic complex named Scinax squalirostris. In the first scenario, there are two possible species: one with tropical and other with subtropical/temperate distributions, respectively. The second scenario points to the existence of at least nine species: one in the Pampas, one in the Chaco and the remaining seven isolated in 'sky-islands' from the Cerrado and Atlantic Forest domains. The first cladogenetic event of the lineages dates from the Upper Miocene, approximately 7.5 million years ago. This may have occurred by the last contraction of Paranaense Sea. During this period, new suitable areas for S. squalirostris emerged, leading to the clades belonging to tropical and subtropical/temperate zones diversification, and it would be consistent with the first taxonomic scenario. The XI diversification within these two major clades occurred in the transition between the late Tertiary and early Quaternary. The current distribution of S. squalirostris in the tropical zone probably should be linked to climatic and geological changes that occurred in the transition between the Pliocene and Pleistocene. During the Quaternary glaciations, the grasslands have undergone expansion (periods during glaciations) and retraction (during interglacials). When the temperature and moisture increased in the Late Holocene, occurred retraction of the grasslands in favor to the expansion of forests and tree/shrub savannas. Thus, the suitable habitats to S. squalirostris were restricted to the grasslands at altitudes greater than 800m in the tropics. The cycles of grasslands isolation on islands must have influenced the recent diversification of the local clades of S. squalirostris.(Filogeografia de Scinax squalirostris). No presente trabalho, foram utilizados 175 indivíduos de Scinax squalirostris provenientes de 26 localidades dos estados de Minas Gerais, São Paulo, Goiás, Mato Grosso do Sul, Santa Catarina, Rio Grande do Sul, Paraná e do Distrito Federal no Brasil, além de indivíduos do Paraguai, Uruguai e Argentina. Foram sequenciados três fragmentos gênicos mitocondriais (cytb, 12S e CO1) e um fragmento nuclear (RAG-1). A determinação de populações filogeneticamente estruturadas e as hipóteses de parentesco entre elas foram conduzidas com análises filogenéticas baseadas no método de estatística bayesiana. A relação mais parcimoniosa entre os haplótipos foi obtida com o método de „median-joining network‟. A delimitação de prováveis unidades taxonômicas operacionais foi feita a partir do „DNA mini-barcoding‟, aliado às evidências genéticas e filogenéticas. Além disso, foram realizados testes de estruturação populacional, fluxo gênico e flutuação dos tamanhos populacionais. Por fim, os tempos de divergência entre as linhagens foram estimados a partir do método do relógio molecular relaxado. Considerando-se o conceito filogenético de espécie, existem dois possíveis cenários taxonômicos para as linhagens crípticas de Scinax squalirostris. No primeiro, existem duas possíveis espécies: uma de distribuição tropical e outra de distribuição subtropical/temperada. O segundo cenário aponta para a existência de ao menos nove espécies: uma nos Pampas, outra no Chaco e as demais isoladas em „sky-islands‟ no Cerrado e na Mata Atlântica. O primeiro evento cladogenético das linhagens data do Mioceno Superior, há aproximadamente 7.5 milhões de anos, possivelmente em detrimento da última retração do Mar Paranaense. Neste período, surgiram novas áreas adequadas à S. squalirostris, originando o clado tropical e o subtropical/temperado, compatíveis com o primeiro cenário taxonômico. A diversificação dentro destes dois grandes clados provavelmente IX ocorreu no final do Terciário e no início do Quaternário. A atual distribuição de S. squalirostris na zona tropical deve estar ligada às mudanças climáticas e geológicas ocorridas a partir da transição entre o Plioceno e o Pleistoceno. Durante as glaciações do Quaternário, os campos sofreram expansão (durante os períodos glaciais) e retração (durante os interglaciais). Com o aumento da temperatura e da umidade no Holoceno Tardio, houve retração dos campos em favor da expansão das florestas e savanas arbóreas/arbustivas. Com isso, os hábitats ideais à S. squalirostris ficaram restritos aos campos em altitudes maiores do que 800m nas regiões tropicais. Os ciclos de isolamento dos campos em ilhas devem ter influenciado na diversificação local e recente das linhagens de S. squalirostris.Submitted by Luciana Ferreira (lucgeral@gmail.com) on 2016-09-01T15:17:42Z No. of bitstreams: 2 Dissertação - Rafael Félix de Magalhâes - 2012.pdf: 3887052 bytes, checksum: afebf6bf3e40c0419c12be6f417f8336 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5)Approved for entry into archive by Luciana Ferreira (lucgeral@gmail.com) on 2016-09-01T15:17:59Z (GMT) No. of bitstreams: 2 Dissertação - Rafael Félix de Magalhâes - 2012.pdf: 3887052 bytes, checksum: afebf6bf3e40c0419c12be6f417f8336 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5)Made available in DSpace on 2016-09-01T15:17:59Z (GMT). No. of bitstreams: 2 Dissertação - Rafael Félix de Magalhâes - 2012.pdf: 3887052 bytes, checksum: afebf6bf3e40c0419c12be6f417f8336 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5) Previous issue date: 2012-04-27Conselho Nacional de Pesquisa e Desenvolvimento Científico e Tecnológico - CNPqapplication/pdfporUniversidade Federal de GoiásPrograma de Pós-graduação em Ecologia e Evolução (ICB)UFGBrasilInstituto de Ciências Biológicas - ICB (RG)http://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessPeríodo terciárioPeríodo quaternárioCamposPampas e chacoPeriod tertiaryPeriod quaternaryGrasslandPampas and chacoCIENCIAS BIOLOGICAS::ECOLOGIAFilogeografia em áreas abertas da América do Sul: origem e diversificação de linhagens de Scinax squalirostris (Anura, Hylidae)Phylogeography in open areas of South America: origin and diversification of Scinax squalirostris (Anura, Hylidae)info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesis-5361682850774351271600600600600-38727721178273734043263499605295365002-2555911436985713659reponame:Repositório Institucional da UFGinstname:Universidade Federal de Goiás (UFG)instacron:UFGLICENSElicense.txtlicense.txttext/plain; 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dc.title.por.fl_str_mv |
Filogeografia em áreas abertas da América do Sul: origem e diversificação de linhagens de Scinax squalirostris (Anura, Hylidae) |
dc.title.alternative.eng.fl_str_mv |
Phylogeography in open areas of South America: origin and diversification of Scinax squalirostris (Anura, Hylidae) |
title |
Filogeografia em áreas abertas da América do Sul: origem e diversificação de linhagens de Scinax squalirostris (Anura, Hylidae) |
spellingShingle |
Filogeografia em áreas abertas da América do Sul: origem e diversificação de linhagens de Scinax squalirostris (Anura, Hylidae) Magalhães, Rafael Félix de Período terciário Período quaternário Campos Pampas e chaco Period tertiary Period quaternary Grassland Pampas and chaco CIENCIAS BIOLOGICAS::ECOLOGIA |
title_short |
Filogeografia em áreas abertas da América do Sul: origem e diversificação de linhagens de Scinax squalirostris (Anura, Hylidae) |
title_full |
Filogeografia em áreas abertas da América do Sul: origem e diversificação de linhagens de Scinax squalirostris (Anura, Hylidae) |
title_fullStr |
Filogeografia em áreas abertas da América do Sul: origem e diversificação de linhagens de Scinax squalirostris (Anura, Hylidae) |
title_full_unstemmed |
Filogeografia em áreas abertas da América do Sul: origem e diversificação de linhagens de Scinax squalirostris (Anura, Hylidae) |
title_sort |
Filogeografia em áreas abertas da América do Sul: origem e diversificação de linhagens de Scinax squalirostris (Anura, Hylidae) |
author |
Magalhães, Rafael Félix de |
author_facet |
Magalhães, Rafael Félix de |
author_role |
author |
dc.contributor.advisor1.fl_str_mv |
Maciel, Natan Medeiros |
dc.contributor.advisor1Lattes.fl_str_mv |
http://lattes.cnpq.br/2116561844584292 |
dc.contributor.advisor-co1.fl_str_mv |
Collevatti, Rosane Garcia |
dc.contributor.advisor-co1Lattes.fl_str_mv |
http://lattes.cnpq.br/9979596352166630 |
dc.contributor.referee1.fl_str_mv |
Maciel, Natan Medeiros |
dc.contributor.referee2.fl_str_mv |
Diniz Filho, José Alexandre Felizola |
dc.contributor.referee3.fl_str_mv |
Giugliano, Lilian Gimenes |
dc.contributor.authorLattes.fl_str_mv |
http://lattes.cnpq.br/9143426558460108 |
dc.contributor.author.fl_str_mv |
Magalhães, Rafael Félix de |
contributor_str_mv |
Maciel, Natan Medeiros Collevatti, Rosane Garcia Maciel, Natan Medeiros Diniz Filho, José Alexandre Felizola Giugliano, Lilian Gimenes |
dc.subject.por.fl_str_mv |
Período terciário Período quaternário Campos Pampas e chaco |
topic |
Período terciário Período quaternário Campos Pampas e chaco Period tertiary Period quaternary Grassland Pampas and chaco CIENCIAS BIOLOGICAS::ECOLOGIA |
dc.subject.eng.fl_str_mv |
Period tertiary Period quaternary Grassland Pampas and chaco |
dc.subject.cnpq.fl_str_mv |
CIENCIAS BIOLOGICAS::ECOLOGIA |
description |
(Phylogeography of Scinax squalirostris). In this work we used 175 individuals of Scinax squalirostris from 26 localities in the Brazilian states of Minas Gerais, São Paulo, Goiás, Mato Grosso do Sul, Santa Catarina, Rio Grande do Sul, Parana, and Distrito Federal, as well as individuals from Paraguay, Uruguay and Argentina. Three mitochondrial (cytb, 12S and CO1) and one nuclear (RAG-1) gene fragments were sequenced. The determination of the phylogenetic structured populations and the relationships among them were made under phylogenetic analyses based on Bayesian statistical methods. The most parsimonious relationship among haplotypes was made under the method of median-joining network. The delineation of the hypothetical operational taxonomic units was made under DNA mini-barcoding procedures, combined with genetic and phylogenetic evidence. In addition, we performed population structure tests of, gene flow and changes in population sizes. Finally, times of divergence among genealogical lineages were estimated by relaxed molecular clock procedures. Considering the phylogenetic species concept, there are two possible scenarios for the taxonomic lineages of the cryptic complex named Scinax squalirostris. In the first scenario, there are two possible species: one with tropical and other with subtropical/temperate distributions, respectively. The second scenario points to the existence of at least nine species: one in the Pampas, one in the Chaco and the remaining seven isolated in 'sky-islands' from the Cerrado and Atlantic Forest domains. The first cladogenetic event of the lineages dates from the Upper Miocene, approximately 7.5 million years ago. This may have occurred by the last contraction of Paranaense Sea. During this period, new suitable areas for S. squalirostris emerged, leading to the clades belonging to tropical and subtropical/temperate zones diversification, and it would be consistent with the first taxonomic scenario. The XI diversification within these two major clades occurred in the transition between the late Tertiary and early Quaternary. The current distribution of S. squalirostris in the tropical zone probably should be linked to climatic and geological changes that occurred in the transition between the Pliocene and Pleistocene. During the Quaternary glaciations, the grasslands have undergone expansion (periods during glaciations) and retraction (during interglacials). When the temperature and moisture increased in the Late Holocene, occurred retraction of the grasslands in favor to the expansion of forests and tree/shrub savannas. Thus, the suitable habitats to S. squalirostris were restricted to the grasslands at altitudes greater than 800m in the tropics. The cycles of grasslands isolation on islands must have influenced the recent diversification of the local clades of S. squalirostris. |
publishDate |
2012 |
dc.date.issued.fl_str_mv |
2012-04-27 |
dc.date.accessioned.fl_str_mv |
2016-09-01T15:17:59Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
format |
masterThesis |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
MAGALHÃES, R. F. Filogeografia em áreas abertas da América do Sul: origem e diversificação de linhagens de Scinax squalirostris (Anura, Hylidae). 2012. 98 f. Dissertação (Mestrado em Ecologia e Evolução) - Universidade Federal de Goiás, Goiânia, 2012. |
dc.identifier.uri.fl_str_mv |
http://repositorio.bc.ufg.br/tede/handle/tede/6085 |
dc.identifier.dark.fl_str_mv |
ark:/38995/0013000008q1c |
identifier_str_mv |
MAGALHÃES, R. F. Filogeografia em áreas abertas da América do Sul: origem e diversificação de linhagens de Scinax squalirostris (Anura, Hylidae). 2012. 98 f. Dissertação (Mestrado em Ecologia e Evolução) - Universidade Federal de Goiás, Goiânia, 2012. ark:/38995/0013000008q1c |
url |
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