Evidência do aumento de desvios mendelianos mediante análise transgeracional de mutações germinativas em população exposta à radiação ionizante de Césio-137

Detalhes bibliográficos
Autor(a) principal: Oliveira, Lorraynne Guimarães
Data de Publicação: 2022
Tipo de documento: Tese
Idioma: por
Título da fonte: Repositório Institucional da UFG
dARK ID: ark:/38995/0013000007h5s
Texto Completo: http://repositorio.bc.ufg.br/tede/handle/tede/12364
Resumo: On September 13th, 1987, the largest radiological accident in urban areas occurred in Goiânia, Goiás (Brazil), resulting in human, animal, plant and environmental exposure by Cesium-137. The mutagenic effects on the germline of people exposed to ionizing radiation are of particular concern, as the risk of inherited disorders can be increased. Single Nucleotide Variants are the most common form of human genetic variation and occur in greater abundance in a non-coding region and in recent years, several technologies have been developed to identify these variants. One of these technologies is Next-Generation Sequencing, which offers greater amounts of data, shorter sequencing times and reduced costs. The objective of this work is to establish the spectrum and frequency / rate of base de novo substitutions of germ origin from the trio's new generation sequencing data, corresponding to an F1 generation child and his biological parents, accidentally exposed to high and low doses of IR of cesium-137, contributing to knowledge about the biological effects of exposure to ionizing radiation. Considering case and control, the results of 38 parents, and an offspring of 14 children born from the exposed group and 5 children from the unexposed population were included. Exposed individuals had ~39% increase in global mean DMs compared to controls. Exposed mothers had ~44% increase in global mean DMs compared to controls. The A:T>C:G mutation was the one that showed the greatest statistically significant increase in occurrence in the offspring of exposed individuals. Transition replacement rates were higher than transversions in the offspring of cases and controls, but the difference is not statistically significant. In conclusion, with the methodology and biomarkers used, it was possible to identify the origin of mutation in the parents, as well as the type of substitution and to inform which variant was mutated, it was also possible to detect the frequency of the germline mutation in DM which made it possible to retrospectively study this population exposed to IR.
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spelling Cruz, Aparecido Divino dahttp://lattes.cnpq.br/7868817504129985Costa, Emília Oliveira Alveshttp://lattes.cnpq.br/2332660855010816Silva, Daniela de Melo eSilva, Claudio Carlos daDias, Renata de OliveiraLeito Filho, Hugo PereiraCruz, Aparecido Divino dahttp://lattes.cnpq.br/2472230334956095Oliveira, Lorraynne Guimarães2022-10-10T12:02:22Z2022-10-10T12:02:22Z2022-08-12OLIVEIRA, L. G. Evidência do aumento de desvios mendelianos mediante análise transgeracional de mutações germinativas em população exposta à radiação ionizante de Césio-137. 2022. 114 f. Tese (Doutorado em Genética e Biologia Molecular) - Universidade Federal de Goiás, Goiânia, 2022.http://repositorio.bc.ufg.br/tede/handle/tede/12364ark:/38995/0013000007h5sOn September 13th, 1987, the largest radiological accident in urban areas occurred in Goiânia, Goiás (Brazil), resulting in human, animal, plant and environmental exposure by Cesium-137. The mutagenic effects on the germline of people exposed to ionizing radiation are of particular concern, as the risk of inherited disorders can be increased. Single Nucleotide Variants are the most common form of human genetic variation and occur in greater abundance in a non-coding region and in recent years, several technologies have been developed to identify these variants. One of these technologies is Next-Generation Sequencing, which offers greater amounts of data, shorter sequencing times and reduced costs. The objective of this work is to establish the spectrum and frequency / rate of base de novo substitutions of germ origin from the trio's new generation sequencing data, corresponding to an F1 generation child and his biological parents, accidentally exposed to high and low doses of IR of cesium-137, contributing to knowledge about the biological effects of exposure to ionizing radiation. Considering case and control, the results of 38 parents, and an offspring of 14 children born from the exposed group and 5 children from the unexposed population were included. Exposed individuals had ~39% increase in global mean DMs compared to controls. Exposed mothers had ~44% increase in global mean DMs compared to controls. The A:T>C:G mutation was the one that showed the greatest statistically significant increase in occurrence in the offspring of exposed individuals. Transition replacement rates were higher than transversions in the offspring of cases and controls, but the difference is not statistically significant. In conclusion, with the methodology and biomarkers used, it was possible to identify the origin of mutation in the parents, as well as the type of substitution and to inform which variant was mutated, it was also possible to detect the frequency of the germline mutation in DM which made it possible to retrospectively study this population exposed to IR.Em 13 de setembro de 1987 ocorreu em Goiânia, Goiás (Brasil) o maior acidente radiológico em área urbana, tendo como consequência a exposição humana, animal, vegetal e ambiental pelo Césio-137. Os efeitos mutagênicos sobre a linhagem germinativa de pessoas expostas à radiação ionizante são particularmente preocupantes, pois o risco de distúrbios hereditários pode ser aumentado. As Variantes de Nucleotídeo Único são a forma mais comum de variação genética humana e ocorrem em maior abundância em região não codificadora e nos últimos anos diversas tecnologias estão sendo desenvolvidas para identificar essas variantes. Uma destas tecnologias é o Sequenciamento de Nova Geração que oferecem maiores quantidades de dados, tempos de sequenciamento mais curtos e custos reduzidos. O objetivo deste trabalho é estabelecer espectro e frequência de substituições de base de novo de origem germinativa a partir de dados de sequenciamento de nova geração do trio, correspondendo a uma criança da geração F1 e seus pais biológicos, expostos acidentalmente à altas e baixas doses de RI de césio-137, contribuindo com o conhecimento sobre os efeitos biológicos de exposição à radiação ionizante. Considerando caso e controle foram incluídos os resultados de 38 progenitores, e uma prole de 14 filhos (as) nascidos do grupo exposto e 5 filhos da população não exposta. Os indivíduos expostos tiveram ~39% de incremento de média global de DMs comparado ao controle. As mães expostas tiveram ~44% de incremento de média global de DMs comparado ao controle. A mutação do tipo A:T>C:G foi a que demonstrou um maior aumento estatisticamente significativo de acontecer na prole dos indivíduos expostos. As frequências de substituição de transições foram mais altas do que as transversões nos filhos de casos e controles, porém a diferença não é estatisticamente significativa. Em conclusão, com a metodologia e os biomarcadores usados foi possível identificar a origem de mutação dos progenitores, como também o tipo de substituição e informar qual a variante que sofreu a mutação, foi possível ainda detectar a frequência da mutação de linhagem germinativa em DM o que possibilitou estudar retrospectivamente esta população exposta à RI.Submitted by Luciana Ferreira (lucgeral@gmail.com) on 2022-10-07T14:13:00Z No. of bitstreams: 2 Tese - Lorraynne Guimarães Oliveira - 2022.pdf: 8378323 bytes, checksum: d40df93206bf72c13b5169bfc926da4d (MD5) license_rdf: 805 bytes, checksum: 4460e5956bc1d1639be9ae6146a50347 (MD5)Approved for entry into archive by Luciana Ferreira (lucgeral@gmail.com) on 2022-10-10T12:02:22Z (GMT) No. of bitstreams: 2 Tese - Lorraynne Guimarães Oliveira - 2022.pdf: 8378323 bytes, checksum: d40df93206bf72c13b5169bfc926da4d (MD5) license_rdf: 805 bytes, checksum: 4460e5956bc1d1639be9ae6146a50347 (MD5)Made available in DSpace on 2022-10-10T12:02:22Z (GMT). No. of bitstreams: 2 Tese - Lorraynne Guimarães Oliveira - 2022.pdf: 8378323 bytes, checksum: d40df93206bf72c13b5169bfc926da4d (MD5) license_rdf: 805 bytes, checksum: 4460e5956bc1d1639be9ae6146a50347 (MD5) Previous issue date: 2022-08-12Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPESFundação de Amparo à Pesquisa do Estado de GoiásporUniversidade Federal de GoiásPrograma de Pós-graduação em Genética e Biologia Molecular (ICB)UFGBrasilInstituto de Ciências Biológicas - ICB (RG)Attribution-NonCommercial-NoDerivatives 4.0 Internationalhttp://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessBioinformáticaSNVsGenotipagemDesvio mendelianoBioinformaticsSNVsGenotypingMendelian deviationCIENCIAS BIOLOGICAS::GENETICAEvidência do aumento de desvios mendelianos mediante análise transgeracional de mutações germinativas em população exposta à radiação ionizante de Césio-137Evidence of increased transgenerational medelian erros following acidental human exposure to ionizing radiation of Cesium-137info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesis595005005005005002316613reponame:Repositório Institucional da UFGinstname:Universidade Federal de Goiás (UFG)instacron:UFGORIGINALTese - Lorraynne Guimarães Oliveira - 2022.pdfTese - Lorraynne Guimarães Oliveira - 2022.pdfapplication/pdf8378323http://repositorio.bc.ufg.br/tede/bitstreams/471f9c54-b4d9-4d9a-8ee2-50bf073bc0cb/downloadd40df93206bf72c13b5169bfc926da4dMD53LICENSElicense.txtlicense.txttext/plain; charset=utf-81748http://repositorio.bc.ufg.br/tede/bitstreams/7faecaf1-e1fd-475b-b2ee-3ee5e40008d9/download8a4605be74aa9ea9d79846c1fba20a33MD51CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8805http://repositorio.bc.ufg.br/tede/bitstreams/001b60ed-6832-4f93-96a9-9f011cdf48fe/download4460e5956bc1d1639be9ae6146a50347MD52tede/123642022-10-10 09:02:23.087http://creativecommons.org/licenses/by-nc-nd/4.0/Attribution-NonCommercial-NoDerivatives 4.0 Internationalopen.accessoai:repositorio.bc.ufg.br:tede/12364http://repositorio.bc.ufg.br/tedeRepositório InstitucionalPUBhttp://repositorio.bc.ufg.br/oai/requesttasesdissertacoes.bc@ufg.bropendoar:2022-10-10T12:02:23Repositório Institucional da UFG - Universidade Federal de Goiás (UFG)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
dc.title.pt_BR.fl_str_mv Evidência do aumento de desvios mendelianos mediante análise transgeracional de mutações germinativas em população exposta à radiação ionizante de Césio-137
dc.title.alternative.eng.fl_str_mv Evidence of increased transgenerational medelian erros following acidental human exposure to ionizing radiation of Cesium-137
title Evidência do aumento de desvios mendelianos mediante análise transgeracional de mutações germinativas em população exposta à radiação ionizante de Césio-137
spellingShingle Evidência do aumento de desvios mendelianos mediante análise transgeracional de mutações germinativas em população exposta à radiação ionizante de Césio-137
Oliveira, Lorraynne Guimarães
Bioinformática
SNVs
Genotipagem
Desvio mendeliano
Bioinformatics
SNVs
Genotyping
Mendelian deviation
CIENCIAS BIOLOGICAS::GENETICA
title_short Evidência do aumento de desvios mendelianos mediante análise transgeracional de mutações germinativas em população exposta à radiação ionizante de Césio-137
title_full Evidência do aumento de desvios mendelianos mediante análise transgeracional de mutações germinativas em população exposta à radiação ionizante de Césio-137
title_fullStr Evidência do aumento de desvios mendelianos mediante análise transgeracional de mutações germinativas em população exposta à radiação ionizante de Césio-137
title_full_unstemmed Evidência do aumento de desvios mendelianos mediante análise transgeracional de mutações germinativas em população exposta à radiação ionizante de Césio-137
title_sort Evidência do aumento de desvios mendelianos mediante análise transgeracional de mutações germinativas em população exposta à radiação ionizante de Césio-137
author Oliveira, Lorraynne Guimarães
author_facet Oliveira, Lorraynne Guimarães
author_role author
dc.contributor.advisor1.fl_str_mv Cruz, Aparecido Divino da
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/7868817504129985
dc.contributor.advisor-co1.fl_str_mv Costa, Emília Oliveira Alves
dc.contributor.advisor-co1Lattes.fl_str_mv http://lattes.cnpq.br/2332660855010816
dc.contributor.referee1.fl_str_mv Silva, Daniela de Melo e
dc.contributor.referee2.fl_str_mv Silva, Claudio Carlos da
dc.contributor.referee3.fl_str_mv Dias, Renata de Oliveira
dc.contributor.referee4.fl_str_mv Leito Filho, Hugo Pereira
dc.contributor.referee5.fl_str_mv Cruz, Aparecido Divino da
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/2472230334956095
dc.contributor.author.fl_str_mv Oliveira, Lorraynne Guimarães
contributor_str_mv Cruz, Aparecido Divino da
Costa, Emília Oliveira Alves
Silva, Daniela de Melo e
Silva, Claudio Carlos da
Dias, Renata de Oliveira
Leito Filho, Hugo Pereira
Cruz, Aparecido Divino da
dc.subject.por.fl_str_mv Bioinformática
SNVs
Genotipagem
Desvio mendeliano
topic Bioinformática
SNVs
Genotipagem
Desvio mendeliano
Bioinformatics
SNVs
Genotyping
Mendelian deviation
CIENCIAS BIOLOGICAS::GENETICA
dc.subject.eng.fl_str_mv Bioinformatics
SNVs
Genotyping
Mendelian deviation
dc.subject.cnpq.fl_str_mv CIENCIAS BIOLOGICAS::GENETICA
description On September 13th, 1987, the largest radiological accident in urban areas occurred in Goiânia, Goiás (Brazil), resulting in human, animal, plant and environmental exposure by Cesium-137. The mutagenic effects on the germline of people exposed to ionizing radiation are of particular concern, as the risk of inherited disorders can be increased. Single Nucleotide Variants are the most common form of human genetic variation and occur in greater abundance in a non-coding region and in recent years, several technologies have been developed to identify these variants. One of these technologies is Next-Generation Sequencing, which offers greater amounts of data, shorter sequencing times and reduced costs. The objective of this work is to establish the spectrum and frequency / rate of base de novo substitutions of germ origin from the trio's new generation sequencing data, corresponding to an F1 generation child and his biological parents, accidentally exposed to high and low doses of IR of cesium-137, contributing to knowledge about the biological effects of exposure to ionizing radiation. Considering case and control, the results of 38 parents, and an offspring of 14 children born from the exposed group and 5 children from the unexposed population were included. Exposed individuals had ~39% increase in global mean DMs compared to controls. Exposed mothers had ~44% increase in global mean DMs compared to controls. The A:T>C:G mutation was the one that showed the greatest statistically significant increase in occurrence in the offspring of exposed individuals. Transition replacement rates were higher than transversions in the offspring of cases and controls, but the difference is not statistically significant. In conclusion, with the methodology and biomarkers used, it was possible to identify the origin of mutation in the parents, as well as the type of substitution and to inform which variant was mutated, it was also possible to detect the frequency of the germline mutation in DM which made it possible to retrospectively study this population exposed to IR.
publishDate 2022
dc.date.accessioned.fl_str_mv 2022-10-10T12:02:22Z
dc.date.available.fl_str_mv 2022-10-10T12:02:22Z
dc.date.issued.fl_str_mv 2022-08-12
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dc.identifier.citation.fl_str_mv OLIVEIRA, L. G. Evidência do aumento de desvios mendelianos mediante análise transgeracional de mutações germinativas em população exposta à radiação ionizante de Césio-137. 2022. 114 f. Tese (Doutorado em Genética e Biologia Molecular) - Universidade Federal de Goiás, Goiânia, 2022.
dc.identifier.uri.fl_str_mv http://repositorio.bc.ufg.br/tede/handle/tede/12364
dc.identifier.dark.fl_str_mv ark:/38995/0013000007h5s
identifier_str_mv OLIVEIRA, L. G. Evidência do aumento de desvios mendelianos mediante análise transgeracional de mutações germinativas em população exposta à radiação ionizante de Césio-137. 2022. 114 f. Tese (Doutorado em Genética e Biologia Molecular) - Universidade Federal de Goiás, Goiânia, 2022.
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dc.publisher.none.fl_str_mv Universidade Federal de Goiás
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dc.publisher.department.fl_str_mv Instituto de Ciências Biológicas - ICB (RG)
publisher.none.fl_str_mv Universidade Federal de Goiás
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