Relações filogenéticas entre isolados fúngicos de Cyrtopodium saintlegerianum Rchb. f., de Epidendrum nocturnum Jacq. (Orchidaceae) e de Rhizoctonia spp. Fitopatogênicas ao arroz e ao feijão

Detalhes bibliográficos
Autor(a) principal: Luzini, Aline Pereira
Data de Publicação: 2013
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Repositório Institucional da UFG
dARK ID: ark:/38995/0013000004jnd
Texto Completo: http://repositorio.bc.ufg.br/tede/handle/tede/11815
Resumo: The orchids Cyrtopodium saintlegerianum (epiphyte) and Epidendrum nocturnum (rupicola) occur in areas anthropized of cerrado and cerrado rupestre, respectively. Even though, Rhizoctonia sp. is pathogenic to various crops, it is one of the more frequent genera among the microrrhizal fungi. Studies on fungal phylogenetics utilizing the ITS (Internal Transcribed Spacer) region of rDNA are important for evaluating specificity between plant and fungus, the evolutionary history of species and host - pathogen interactions. The objective of the present study include molecular characterization and establishment of phylogenetic relationships among endophytic/micorrhizal fungi isolates of C. saintlegerianum and of E. nocturnum pertaining to genera Rhizoctonia sp., Xylaria sp. and isolates of Rhizoctonia spp. pathogenic to rice and common beans and of isolates obtained from Genbank. The genomic DNA of one micorrhizal isolate, two of Xylaria sp. (endophytic), and four of rice and bean pathogens were extracted, and soon after sequencing of ITS 1 and ITS2 of nrDNA was done. The phylogenetic relations, inferred by Bayesian analysis among the rhizoctonia-like isolates of the present study and found in GenBank showed three clusters, and Xylarioides showed one cluster. The molecular results of micorrhizal Rhizoctonia sp. and Xylariodes are in close agreement with the results on morphology. The micorrhizal isolates formed one poliphyletic clad with the isolates of the GenBank. The micorrhizal isolate of Rhizoctonia sp. obtained from E. nocturnum formed one lineage different from Rhizoctonia spp. originating from other orchid species of GenBank. The Xylarioides isolates obtained in the present study showed lineage different of the found in GenBank.
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spelling Araújo, Leila Garcês dehttp://lattes.cnpq.br/3488880262260757Araújo, Leila Garcês deCollevatti, Rosane GarciaPereira, Marlon CorrêaCoelho, Alexandre Siqueira GuedesCollevatti, Rosane Garciahttps://orcid.org/ 0000-0002-3733-7059http://lattes.cnpq.br/8648564197956903Luzini, Aline Pereira2021-12-28T13:02:49Z2021-12-28T13:02:49Z2013-03-21LUZINI, A. P. Relações filogenéticas entre isolados fúngicos de Cyrtopodium saintlegerianum Rchb. f., de Epidendrum nocturnum Jacq. (Orchidaceae) e de Rhizoctonia spp. Fitopatogênicas ao arroz e ao feijão. 2013. 65 f. Dissertação (Mestrado em Genética e Melhoramento de Plantas) - Universidade Federal de Goiás, Goiânia, 2013.http://repositorio.bc.ufg.br/tede/handle/tede/11815ark:/38995/0013000004jndThe orchids Cyrtopodium saintlegerianum (epiphyte) and Epidendrum nocturnum (rupicola) occur in areas anthropized of cerrado and cerrado rupestre, respectively. Even though, Rhizoctonia sp. is pathogenic to various crops, it is one of the more frequent genera among the microrrhizal fungi. Studies on fungal phylogenetics utilizing the ITS (Internal Transcribed Spacer) region of rDNA are important for evaluating specificity between plant and fungus, the evolutionary history of species and host - pathogen interactions. The objective of the present study include molecular characterization and establishment of phylogenetic relationships among endophytic/micorrhizal fungi isolates of C. saintlegerianum and of E. nocturnum pertaining to genera Rhizoctonia sp., Xylaria sp. and isolates of Rhizoctonia spp. pathogenic to rice and common beans and of isolates obtained from Genbank. The genomic DNA of one micorrhizal isolate, two of Xylaria sp. (endophytic), and four of rice and bean pathogens were extracted, and soon after sequencing of ITS 1 and ITS2 of nrDNA was done. The phylogenetic relations, inferred by Bayesian analysis among the rhizoctonia-like isolates of the present study and found in GenBank showed three clusters, and Xylarioides showed one cluster. The molecular results of micorrhizal Rhizoctonia sp. and Xylariodes are in close agreement with the results on morphology. The micorrhizal isolates formed one poliphyletic clad with the isolates of the GenBank. The micorrhizal isolate of Rhizoctonia sp. obtained from E. nocturnum formed one lineage different from Rhizoctonia spp. originating from other orchid species of GenBank. The Xylarioides isolates obtained in the present study showed lineage different of the found in GenBank.Cyrtopodium saintlegerianum (epífita) e Epidendrum nocturnum (rupícola) são orquídeas que ocorrem em áreas antropizadas de Cerrado e Cerrado Rupestre, respectivamente. Rhizoctonia sp. é um dos gêneros mais frequentes entre os fungos micorrízicos de orquídeas, embora seja patógeno de várias culturas. Estudos filogenéticos de fungos utilizando a região ITS (Internal Transcribed Spacer) do rDNA são importantes devido sua extensão (500-800pb) e sua variabilidade entre espécies, para avaliar a especificidade entre fungo e planta, a história evolutiva das espécies e as interações entre patógeno e hospedeiro. O presente trabalho objetivou caracterizar molecularmente e estabelecer relações filogenéticas entre os fungos micorrízicos/endofíticos isolados de C. saintlegerianum e de E. nocturnum pertencentes aos gêneros Rhizoctonia sp., Xylaria sp. e isolados de Rhizoctonia spp. patogênicos ao arroz e ao feijão, e de alguns isolados obtidos do Genbank. O DNA genômico de um isolado micorrízico, dois de Xylaria sp. (endofíticos), e quatro fitopatogênicos ao arroz e ao feijão foi extraído e em seguida realizou-se o sequenciamento da região ITS1 e ITS2 do nrDNA. As relações filogenéticas, inferidas por meio de análises Bayesianas entre os isolados rizoctonioides do presente trabalho e dos encontrados no GenBank mostraram três clados, e os isolados Xylarioides apresentaram um único grande clado. Os resultados moleculares de Rhizoctonia sp. micorrízica e Xylarioides corroboram os resultados morfológicos. Os isolados micorrízicos compõem um clado polifilético com os do GenBank. O isolado micorrízico de Rhizoctonia sp. obtido de E. Nocturnum formou uma linhagem diferente das Rhizoctonias spp. oriundas de outras espécies de orquídeas do GenBank. Os isolados Xylarioides obtidos no presente trabalho mostraram linhagens diferentes dos encontrados no GenBank.Submitted by Franciele Moreira (francielemoreyra@gmail.com) on 2021-12-13T13:42:18Z No. of bitstreams: 2 Dissertação - Aline Pereira Luzini - 2013.pdf: 3020413 bytes, checksum: c0676722bca1682a2b51b9ef902c8ff5 (MD5) license_rdf: 805 bytes, checksum: 4460e5956bc1d1639be9ae6146a50347 (MD5)Approved for entry into archive by Luciana Ferreira (lucgeral@gmail.com) on 2021-12-28T13:02:49Z (GMT) No. of bitstreams: 2 Dissertação - Aline Pereira Luzini - 2013.pdf: 3020413 bytes, checksum: c0676722bca1682a2b51b9ef902c8ff5 (MD5) license_rdf: 805 bytes, checksum: 4460e5956bc1d1639be9ae6146a50347 (MD5)Made available in DSpace on 2021-12-28T13:02:49Z (GMT). No. of bitstreams: 2 Dissertação - Aline Pereira Luzini - 2013.pdf: 3020413 bytes, checksum: c0676722bca1682a2b51b9ef902c8ff5 (MD5) license_rdf: 805 bytes, checksum: 4460e5956bc1d1639be9ae6146a50347 (MD5) Previous issue date: 2013-03-21Fundação de Amparo à Pesquisa do Estado de GoiásporUniversidade Federal de GoiásPrograma de Pós-graduação em Genética e Melhoramento de Plantas (EA)UFGBrasilEscola de Agronomia - EA (RG)Attribution-NonCommercial-NoDerivatives 4.0 Internationalhttp://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessOrquídeaRizoctonioideEndofíticoMicorrizaFilogenia molecularOrchidsRhizoctonia-like fungiEndophyticMycorrhizaMolecular phylogeneticsCIENCIAS BIOLOGICAS::ECOLOGIA::ECOLOGIA APLICADARelações filogenéticas entre isolados fúngicos de Cyrtopodium saintlegerianum Rchb. f., de Epidendrum nocturnum Jacq. (Orchidaceae) e de Rhizoctonia spp. Fitopatogênicas ao arroz e ao feijãoPhylogenetic relationships among fungi of orchids Cyrtopodium saintlegerianum Rchb. f., and Epidendrum nocturnum Jacq. 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dc.title.pt_BR.fl_str_mv Relações filogenéticas entre isolados fúngicos de Cyrtopodium saintlegerianum Rchb. f., de Epidendrum nocturnum Jacq. (Orchidaceae) e de Rhizoctonia spp. Fitopatogênicas ao arroz e ao feijão
dc.title.alternative.eng.fl_str_mv Phylogenetic relationships among fungi of orchids Cyrtopodium saintlegerianum Rchb. f., and Epidendrum nocturnum Jacq. (Orchidaceae) and plant patogenic Rhizoctonia spp.
title Relações filogenéticas entre isolados fúngicos de Cyrtopodium saintlegerianum Rchb. f., de Epidendrum nocturnum Jacq. (Orchidaceae) e de Rhizoctonia spp. Fitopatogênicas ao arroz e ao feijão
spellingShingle Relações filogenéticas entre isolados fúngicos de Cyrtopodium saintlegerianum Rchb. f., de Epidendrum nocturnum Jacq. (Orchidaceae) e de Rhizoctonia spp. Fitopatogênicas ao arroz e ao feijão
Luzini, Aline Pereira
Orquídea
Rizoctonioide
Endofítico
Micorriza
Filogenia molecular
Orchids
Rhizoctonia-like fungi
Endophytic
Mycorrhiza
Molecular phylogenetics
CIENCIAS BIOLOGICAS::ECOLOGIA::ECOLOGIA APLICADA
title_short Relações filogenéticas entre isolados fúngicos de Cyrtopodium saintlegerianum Rchb. f., de Epidendrum nocturnum Jacq. (Orchidaceae) e de Rhizoctonia spp. Fitopatogênicas ao arroz e ao feijão
title_full Relações filogenéticas entre isolados fúngicos de Cyrtopodium saintlegerianum Rchb. f., de Epidendrum nocturnum Jacq. (Orchidaceae) e de Rhizoctonia spp. Fitopatogênicas ao arroz e ao feijão
title_fullStr Relações filogenéticas entre isolados fúngicos de Cyrtopodium saintlegerianum Rchb. f., de Epidendrum nocturnum Jacq. (Orchidaceae) e de Rhizoctonia spp. Fitopatogênicas ao arroz e ao feijão
title_full_unstemmed Relações filogenéticas entre isolados fúngicos de Cyrtopodium saintlegerianum Rchb. f., de Epidendrum nocturnum Jacq. (Orchidaceae) e de Rhizoctonia spp. Fitopatogênicas ao arroz e ao feijão
title_sort Relações filogenéticas entre isolados fúngicos de Cyrtopodium saintlegerianum Rchb. f., de Epidendrum nocturnum Jacq. (Orchidaceae) e de Rhizoctonia spp. Fitopatogênicas ao arroz e ao feijão
author Luzini, Aline Pereira
author_facet Luzini, Aline Pereira
author_role author
dc.contributor.advisor1.fl_str_mv Araújo, Leila Garcês de
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/3488880262260757
dc.contributor.referee1.fl_str_mv Araújo, Leila Garcês de
dc.contributor.referee2.fl_str_mv Collevatti, Rosane Garcia
dc.contributor.referee3.fl_str_mv Pereira, Marlon Corrêa
dc.contributor.referee4.fl_str_mv Coelho, Alexandre Siqueira Guedes
dc.contributor.advisor2.fl_str_mv Collevatti, Rosane Garcia
dc.contributor.advisor2Lattes.fl_str_mv https://orcid.org/ 0000-0002-3733-7059
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/8648564197956903
dc.contributor.author.fl_str_mv Luzini, Aline Pereira
contributor_str_mv Araújo, Leila Garcês de
Araújo, Leila Garcês de
Collevatti, Rosane Garcia
Pereira, Marlon Corrêa
Coelho, Alexandre Siqueira Guedes
Collevatti, Rosane Garcia
dc.subject.por.fl_str_mv Orquídea
Rizoctonioide
Endofítico
Micorriza
Filogenia molecular
topic Orquídea
Rizoctonioide
Endofítico
Micorriza
Filogenia molecular
Orchids
Rhizoctonia-like fungi
Endophytic
Mycorrhiza
Molecular phylogenetics
CIENCIAS BIOLOGICAS::ECOLOGIA::ECOLOGIA APLICADA
dc.subject.eng.fl_str_mv Orchids
Rhizoctonia-like fungi
Endophytic
Mycorrhiza
Molecular phylogenetics
dc.subject.cnpq.fl_str_mv CIENCIAS BIOLOGICAS::ECOLOGIA::ECOLOGIA APLICADA
description The orchids Cyrtopodium saintlegerianum (epiphyte) and Epidendrum nocturnum (rupicola) occur in areas anthropized of cerrado and cerrado rupestre, respectively. Even though, Rhizoctonia sp. is pathogenic to various crops, it is one of the more frequent genera among the microrrhizal fungi. Studies on fungal phylogenetics utilizing the ITS (Internal Transcribed Spacer) region of rDNA are important for evaluating specificity between plant and fungus, the evolutionary history of species and host - pathogen interactions. The objective of the present study include molecular characterization and establishment of phylogenetic relationships among endophytic/micorrhizal fungi isolates of C. saintlegerianum and of E. nocturnum pertaining to genera Rhizoctonia sp., Xylaria sp. and isolates of Rhizoctonia spp. pathogenic to rice and common beans and of isolates obtained from Genbank. The genomic DNA of one micorrhizal isolate, two of Xylaria sp. (endophytic), and four of rice and bean pathogens were extracted, and soon after sequencing of ITS 1 and ITS2 of nrDNA was done. The phylogenetic relations, inferred by Bayesian analysis among the rhizoctonia-like isolates of the present study and found in GenBank showed three clusters, and Xylarioides showed one cluster. The molecular results of micorrhizal Rhizoctonia sp. and Xylariodes are in close agreement with the results on morphology. The micorrhizal isolates formed one poliphyletic clad with the isolates of the GenBank. The micorrhizal isolate of Rhizoctonia sp. obtained from E. nocturnum formed one lineage different from Rhizoctonia spp. originating from other orchid species of GenBank. The Xylarioides isolates obtained in the present study showed lineage different of the found in GenBank.
publishDate 2013
dc.date.issued.fl_str_mv 2013-03-21
dc.date.accessioned.fl_str_mv 2021-12-28T13:02:49Z
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dc.identifier.citation.fl_str_mv LUZINI, A. P. Relações filogenéticas entre isolados fúngicos de Cyrtopodium saintlegerianum Rchb. f., de Epidendrum nocturnum Jacq. (Orchidaceae) e de Rhizoctonia spp. Fitopatogênicas ao arroz e ao feijão. 2013. 65 f. Dissertação (Mestrado em Genética e Melhoramento de Plantas) - Universidade Federal de Goiás, Goiânia, 2013.
dc.identifier.uri.fl_str_mv http://repositorio.bc.ufg.br/tede/handle/tede/11815
dc.identifier.dark.fl_str_mv ark:/38995/0013000004jnd
identifier_str_mv LUZINI, A. P. Relações filogenéticas entre isolados fúngicos de Cyrtopodium saintlegerianum Rchb. f., de Epidendrum nocturnum Jacq. (Orchidaceae) e de Rhizoctonia spp. Fitopatogênicas ao arroz e ao feijão. 2013. 65 f. Dissertação (Mestrado em Genética e Melhoramento de Plantas) - Universidade Federal de Goiás, Goiânia, 2013.
ark:/38995/0013000004jnd
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dc.publisher.department.fl_str_mv Escola de Agronomia - EA (RG)
publisher.none.fl_str_mv Universidade Federal de Goiás
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