Medição interativa por imagens de colônias de isolados do Corynespora cassiicola em placas de petri

Detalhes bibliográficos
Autor(a) principal: Kai, Priscila Marques
Data de Publicação: 2018
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Repositório Institucional da UFG
Texto Completo: http://repositorio.bc.ufg.br/tede/handle/tede/8765
Resumo: The use of chemicals as a form of prevention, protection and control to combat diseases that affect plants, is a feasible solution involving control measures, that over the years, with the improvement of these products, raise the effectiveness of such chemicals. However, due to the emergence of microorganisms resistant to these products, new tests need to be performed in the laboratory, requiring the effort of the specialist in phytopathology and to investigate these microorganisms, with research of genetic analysis, resistance to chemical products, among others. One of the methods used includes laboratory tests, periodically verifying the growth of the fungal colony with measurements using a ruler or caliper. However, this method, although it is most commonly used, is also imprecise, since measurements of the same plaque by different professionals may result in different measurements. Due to this, the development of a method that assists professionals in phytopathology, for measurement of fungal colony growth in Petri dishes, provides other means of measurement besides the traditional use of visual analysis by ruler or pachymeter. For this, processes were developed involving region segmentation, unnecessary information removal and colony size calculation by color analysis. The study was developed using images containing Petri dishes with growing fungus colonies, comparing the manual method performed by the specialist in Phytopathology and the performed by digital image processing. It was possible to verify the application and potential of the method developed for creating mobile applications. Therefore, this work presents a method for measuring fungal colony on Petri dishes from isolates of the fungus Corynespora cassiicola, using techniques involving processing from images captured by mobile device, with the purpose of assisting the professional, providing other means besides a manual process.
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spelling Soares, Fabrízzio Alphonsus Alves de Melo Nuneshttp://lattes.cnpq.br/7206645857721831Soares, Fabrízzio Alphonsus Alves de Melo NunesCosta, Ronaldo Martins daFleury, Claudio Afonsohttp://lattes.cnpq.br/8210180026970752Kai, Priscila Marques2018-08-06T11:51:23Z2018-07-11KAI, P. M. Medição interativa por imagens de colônias de isolados do Corynespora cassiicola em placas de petri. 2018. 69 f. Dissertação (Mestrado em Ciência da Computação) - Universidade Federal de Goiás, Goiânia, 2018.http://repositorio.bc.ufg.br/tede/handle/tede/8765The use of chemicals as a form of prevention, protection and control to combat diseases that affect plants, is a feasible solution involving control measures, that over the years, with the improvement of these products, raise the effectiveness of such chemicals. However, due to the emergence of microorganisms resistant to these products, new tests need to be performed in the laboratory, requiring the effort of the specialist in phytopathology and to investigate these microorganisms, with research of genetic analysis, resistance to chemical products, among others. One of the methods used includes laboratory tests, periodically verifying the growth of the fungal colony with measurements using a ruler or caliper. However, this method, although it is most commonly used, is also imprecise, since measurements of the same plaque by different professionals may result in different measurements. Due to this, the development of a method that assists professionals in phytopathology, for measurement of fungal colony growth in Petri dishes, provides other means of measurement besides the traditional use of visual analysis by ruler or pachymeter. For this, processes were developed involving region segmentation, unnecessary information removal and colony size calculation by color analysis. The study was developed using images containing Petri dishes with growing fungus colonies, comparing the manual method performed by the specialist in Phytopathology and the performed by digital image processing. It was possible to verify the application and potential of the method developed for creating mobile applications. Therefore, this work presents a method for measuring fungal colony on Petri dishes from isolates of the fungus Corynespora cassiicola, using techniques involving processing from images captured by mobile device, with the purpose of assisting the professional, providing other means besides a manual process.O uso de produtos químicos como forma de prevenção, proteção e controle para o combate a doenças que afetam plantas, é uma solução factível envolvendo medidas de controle, que ao passar dos anos, com o melhoramento desses produtos, elevam a efetividade de tais químicos. No entanto, devido ao surgimento de microrganismos resistentes a esses produtos, novos testes precisam ser realizados em laboratório, exigindo esforço do especialista em fitopatologia a fim de investigar estes microrganismos, com pesquisas a partir da análise genética, resistência a produtos químicos, dentre outros. Um dos métodos utilizados engloba testes laboratoriais, verificando periodicamente o crescimento da colônia de fungos com medições com uso de régua ou paquímetro. Entretanto, este método, apesar de ser o mais comumente utilizado, é também impreciso, pois medições de uma mesma placa por profissionais diferentes podem resultar emmedidas distintas. Devido a isto, o desenvolvimento de um método que auxilie profissionais em fitopatologia, para medição do crescimento da colônia de fungos em placas de Petri, fornece outros meios de medição além do uso tradicional de análise visual por régua ou paquímetro. Para isto, foram desenvolvidos processos de manipulação de imagens, envolvendo segmentação de regiões, remoções de informações desnecessárias e o cálculo do tamanho da colônia por análise de cores. O estudo foi desenvolvido com uso de imagens contendo placas de Petri com colônias de fungo em crescimento, realizando comparações entre o método manual realizado pelo especialista em Fitopatologia e o realizado pelo processamento digital de imagens. Foi possível verificar a aplicação e potencial do método desenvolvido para criação de aplicações para dispositivos móveis. Portanto, este trabalho apresenta um método para medição da colônia de fungos em placas de Petri, de isolados do fungo Corynespora cassiicola, utilizando técnicas envolvendo processamento a partir de imagens captadas por dispositivo móvel, com objetivo de auxiliar o profissional, disponibilizando outros meios além do processo manual.Submitted by Luciana Ferreira (lucgeral@gmail.com) on 2018-08-06T11:20:43Z No. of bitstreams: 2 Dissertação - Priscila Marques Kai - 2018.pdf: 8253899 bytes, checksum: 434f30c52017af9e1b62f134e846b0ec (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5)Approved for entry into archive by Luciana Ferreira (lucgeral@gmail.com) on 2018-08-06T11:51:23Z (GMT) No. of bitstreams: 2 Dissertação - Priscila Marques Kai - 2018.pdf: 8253899 bytes, checksum: 434f30c52017af9e1b62f134e846b0ec (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5)Made available in DSpace on 2018-08-06T11:51:23Z (GMT). No. of bitstreams: 2 Dissertação - Priscila Marques Kai - 2018.pdf: 8253899 bytes, checksum: 434f30c52017af9e1b62f134e846b0ec (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5) Previous issue date: 2018-07-11Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPESapplication/pdfporUniversidade Federal de GoiásPrograma de Pós-graduação em Ciência da Computação (INF)UFGBrasilInstituto de Informática - INF (RG)http://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessSegmentaçãoCorynespora cassiicolaMedição por imagensSegmentationCorynespora cassiicolaMeasurement by imagesCIENCIAS EXATAS E DA TERRA::CIENCIA DA COMPUTACAOMedição interativa por imagens de colônias de isolados do Corynespora cassiicola em placas de petriInteractive measurement by images of isolated of Corynespora cassiicola colonies in petri dishesinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesis-3303550325223384799600600600600-771226673463364476836717112058112045092075167498588264571reponame:Repositório Institucional da UFGinstname:Universidade Federal de Goiás (UFG)instacron:UFGLICENSElicense.txtlicense.txttext/plain; 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dc.title.eng.fl_str_mv Medição interativa por imagens de colônias de isolados do Corynespora cassiicola em placas de petri
dc.title.alternative.eng.fl_str_mv Interactive measurement by images of isolated of Corynespora cassiicola colonies in petri dishes
title Medição interativa por imagens de colônias de isolados do Corynespora cassiicola em placas de petri
spellingShingle Medição interativa por imagens de colônias de isolados do Corynespora cassiicola em placas de petri
Kai, Priscila Marques
Segmentação
Corynespora cassiicola
Medição por imagens
Segmentation
Corynespora cassiicola
Measurement by images
CIENCIAS EXATAS E DA TERRA::CIENCIA DA COMPUTACAO
title_short Medição interativa por imagens de colônias de isolados do Corynespora cassiicola em placas de petri
title_full Medição interativa por imagens de colônias de isolados do Corynespora cassiicola em placas de petri
title_fullStr Medição interativa por imagens de colônias de isolados do Corynespora cassiicola em placas de petri
title_full_unstemmed Medição interativa por imagens de colônias de isolados do Corynespora cassiicola em placas de petri
title_sort Medição interativa por imagens de colônias de isolados do Corynespora cassiicola em placas de petri
author Kai, Priscila Marques
author_facet Kai, Priscila Marques
author_role author
dc.contributor.advisor1.fl_str_mv Soares, Fabrízzio Alphonsus Alves de Melo Nunes
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/7206645857721831
dc.contributor.referee1.fl_str_mv Soares, Fabrízzio Alphonsus Alves de Melo Nunes
dc.contributor.referee2.fl_str_mv Costa, Ronaldo Martins da
dc.contributor.referee3.fl_str_mv Fleury, Claudio Afonso
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/8210180026970752
dc.contributor.author.fl_str_mv Kai, Priscila Marques
contributor_str_mv Soares, Fabrízzio Alphonsus Alves de Melo Nunes
Soares, Fabrízzio Alphonsus Alves de Melo Nunes
Costa, Ronaldo Martins da
Fleury, Claudio Afonso
dc.subject.por.fl_str_mv Segmentação
Corynespora cassiicola
Medição por imagens
topic Segmentação
Corynespora cassiicola
Medição por imagens
Segmentation
Corynespora cassiicola
Measurement by images
CIENCIAS EXATAS E DA TERRA::CIENCIA DA COMPUTACAO
dc.subject.eng.fl_str_mv Segmentation
Corynespora cassiicola
Measurement by images
dc.subject.cnpq.fl_str_mv CIENCIAS EXATAS E DA TERRA::CIENCIA DA COMPUTACAO
description The use of chemicals as a form of prevention, protection and control to combat diseases that affect plants, is a feasible solution involving control measures, that over the years, with the improvement of these products, raise the effectiveness of such chemicals. However, due to the emergence of microorganisms resistant to these products, new tests need to be performed in the laboratory, requiring the effort of the specialist in phytopathology and to investigate these microorganisms, with research of genetic analysis, resistance to chemical products, among others. One of the methods used includes laboratory tests, periodically verifying the growth of the fungal colony with measurements using a ruler or caliper. However, this method, although it is most commonly used, is also imprecise, since measurements of the same plaque by different professionals may result in different measurements. Due to this, the development of a method that assists professionals in phytopathology, for measurement of fungal colony growth in Petri dishes, provides other means of measurement besides the traditional use of visual analysis by ruler or pachymeter. For this, processes were developed involving region segmentation, unnecessary information removal and colony size calculation by color analysis. The study was developed using images containing Petri dishes with growing fungus colonies, comparing the manual method performed by the specialist in Phytopathology and the performed by digital image processing. It was possible to verify the application and potential of the method developed for creating mobile applications. Therefore, this work presents a method for measuring fungal colony on Petri dishes from isolates of the fungus Corynespora cassiicola, using techniques involving processing from images captured by mobile device, with the purpose of assisting the professional, providing other means besides a manual process.
publishDate 2018
dc.date.accessioned.fl_str_mv 2018-08-06T11:51:23Z
dc.date.issued.fl_str_mv 2018-07-11
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dc.identifier.citation.fl_str_mv KAI, P. M. Medição interativa por imagens de colônias de isolados do Corynespora cassiicola em placas de petri. 2018. 69 f. Dissertação (Mestrado em Ciência da Computação) - Universidade Federal de Goiás, Goiânia, 2018.
dc.identifier.uri.fl_str_mv http://repositorio.bc.ufg.br/tede/handle/tede/8765
identifier_str_mv KAI, P. M. Medição interativa por imagens de colônias de isolados do Corynespora cassiicola em placas de petri. 2018. 69 f. Dissertação (Mestrado em Ciência da Computação) - Universidade Federal de Goiás, Goiânia, 2018.
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