Síntese, caracterização e estudos estruturais de análogos do peptídeo antimicrobiano Cn-AMP1 em meios biomiméticos
Autor(a) principal: | |
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Data de Publicação: | 2015 |
Tipo de documento: | Dissertação |
Idioma: | por |
Título da fonte: | Repositório Institucional da UFG |
dARK ID: | ark:/38995/001300000dbpx |
Texto Completo: | http://repositorio.bc.ufg.br/tede/handle/tede/5298 |
Resumo: | Antimicrobial peptides are part of the innate defense of several organisms, and represent candidate drugs in their natural form, allowing for the development of modified peptides with improved pharmacological profiles. In this context, this study aimed of the synthesis of Cn-AMP1, an antimicrobial peptide naturally isolated from green coconut water, which has activity against fungi, gram-positive and gram-negative bacterias well as effects on the proliferation of cancer cells and low toxicity to mammalian cells, the analogs [Trp9] Cn-AMP1 and [Gly9] Cn-AMP1 were also obtained by solid phase peptide synthesis using the Fmoc strategy. The characterization and purification of the peptides were performed by mass spectrometry and high-performance liquid chromatography. Structural studies of the peptides were performed by circular dichroism (CD) and nuclear magnetic resonance (NMR) in the presence of biomimetic enviroments. CD and NMR results indicated that the peptides do not present preferential conformations in aqueous solutions, however adopt helical conformations in membrane mimetic environments. CD studies have shown that Cn-AMP1 and [Gly9] Cn-AMP1 do not adopt show defined conformation in the presence of DPC micelles at different pH values, however the peptide [Trp9] Cn- AMP1 showed a small a-helical content in the presence of 100mM DPC. In the presence of SDS the spectra of all peptides showed helical profiles at both pH 4, pH 7 as well as in the absence of buffer. NMR experiments indicated the interaction of the peptides [Trp9] Cn-AMP1 and [Gly9] Cn-AMP1 with SDS micelles at pH 4 (25 °C), and structural calculations indicated that [Trp9]Cn- AMP1 adopts an α-helical conformation between Val2-Gly8, and that [Gly9] Cn- AMP1 adopts an α -helical conformation between Val2-Arg5. Dynamic light scattering and zeta potential experiments were performed to investigate the effect of addition of peptides into phospholipid vesicles. All of the peptides caused variations on the POPC:POPG (3:1) and POPC, LUVs hydrodynamic radios, however major changes were observed for the anionic vesicles due to the strong interaction between the arginine residue of the peptides and the negativelly charge of membrane. |
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Lião, Luciano Moraishttp://lattes.cnpq.br/2647529909397336Verly, Rodrigo Moreirahttp://lattes.cnpq.br/9970931211285890Lião, Luciano MoraisResende, Jarbas MagalhãesFernandes, Kátia Fláviahttp://lattes.cnpq.br/1172711137284074Matos, Carolina Oliveira2016-03-04T12:01:47Z2015-07-31MATOS, C. O. Síntese, caracterização e estudos estruturais de análogos do peptídeo antimicrobiano Cn-AMP1 em meios biomiméticos. 2015. 108 f. Dissertação (Mestrado em Química) - Universidade Federal de Goiás, Goiânia, 2015.http://repositorio.bc.ufg.br/tede/handle/tede/5298ark:/38995/001300000dbpxAntimicrobial peptides are part of the innate defense of several organisms, and represent candidate drugs in their natural form, allowing for the development of modified peptides with improved pharmacological profiles. In this context, this study aimed of the synthesis of Cn-AMP1, an antimicrobial peptide naturally isolated from green coconut water, which has activity against fungi, gram-positive and gram-negative bacterias well as effects on the proliferation of cancer cells and low toxicity to mammalian cells, the analogs [Trp9] Cn-AMP1 and [Gly9] Cn-AMP1 were also obtained by solid phase peptide synthesis using the Fmoc strategy. The characterization and purification of the peptides were performed by mass spectrometry and high-performance liquid chromatography. Structural studies of the peptides were performed by circular dichroism (CD) and nuclear magnetic resonance (NMR) in the presence of biomimetic enviroments. CD and NMR results indicated that the peptides do not present preferential conformations in aqueous solutions, however adopt helical conformations in membrane mimetic environments. CD studies have shown that Cn-AMP1 and [Gly9] Cn-AMP1 do not adopt show defined conformation in the presence of DPC micelles at different pH values, however the peptide [Trp9] Cn- AMP1 showed a small a-helical content in the presence of 100mM DPC. In the presence of SDS the spectra of all peptides showed helical profiles at both pH 4, pH 7 as well as in the absence of buffer. NMR experiments indicated the interaction of the peptides [Trp9] Cn-AMP1 and [Gly9] Cn-AMP1 with SDS micelles at pH 4 (25 °C), and structural calculations indicated that [Trp9]Cn- AMP1 adopts an α-helical conformation between Val2-Gly8, and that [Gly9] Cn- AMP1 adopts an α -helical conformation between Val2-Arg5. Dynamic light scattering and zeta potential experiments were performed to investigate the effect of addition of peptides into phospholipid vesicles. All of the peptides caused variations on the POPC:POPG (3:1) and POPC, LUVs hydrodynamic radios, however major changes were observed for the anionic vesicles due to the strong interaction between the arginine residue of the peptides and the negativelly charge of membrane.Os peptídeos antimicrobianos fazem parte da defesa inata de vários organismos e representam candidatos a fármacos em sua forma natural, o que possibilita o desenvolvimento de peptídeos modificados com perfis farmacológicos melhorados. Neste contexto, o trabalho teve como objetivo a síntese do peptídeo antimicrobiano Cn-AMP1, originalmente isolado da água de coco verde, o qual apresenta atividade contra fungos, bactérias grampositivas e gram-negativas, efeitos sobre a proliferação de células cancerígenas e baixa toxicidade em células de mamíferos. Foram também sintetizados seus análogos [Trp9]Cn-AMP1 e [Gly9]Cn-AMP1 por síntese de peptídeos em fase sólida utilizando a estratégia Fmoc. A caracterização e purificação dos peptídeos foram realizadas por espectrometria de massas e cromatografia líquida de alta eficiência. Estudos estruturais dos peptídeos foram avaliados por Dicroísmo Circular (CD) e Ressonância Magnética Nuclear (RMN) na presença de meios biomiméticos. Os resultados de CD e RMN evidenciaram que os peptídeos se apresentam de forma desordenada em solução aquosa, porém adotam conformações helicoidais na presença de meios que mimetizam a membrana celular. Estudos detalhados de CD mostraram que os peptídeos Cn-AMP1 e [Gly9]Cn-AMP1 não apresentam estrutura definida em DPC a diferentes valores de pH, e o peptídeo [Trp9]Cn- AMP1 mostrou uma pequena estruturação em a-hélice na presença de 100mM de DPC. Em SDS todos os peptídeos apresentam um perfil de estrutura helicoidal em pH 4, pH 7 e sem a adição de tampão. Experimentos de RMN mostraram a interação dos peptídeos [Trp9]Cn-AMP1 e [Gly9]Cn-AMP1 com micelas de SDS em pH 4 a 25ºC. Cálculos estruturais demonstraram que o peptídeo [Trp9]Cn-AMP1 assume conformação em α-hélice entre os resíduos Val2-Gly8, ao passo que o peptídeo [Gly9]Cn-AMP1 assume conformação em α- hélice entre os resíduos Val2-Arg5. Experimentos de espalhamento de luz dinâmico e potencial zeta mostraram ainda o efeito da adição de peptídeos no tamanho e nas cargas superficiais de vesículas fosfolipídicas. Todos os peptídeos causaram variação no Dh de LUVs de POPC:POPG (3:1) e LUVs de POPC, tendo-se observado maiores alterações em vesículas predominantemente aniônicas de POPC:POPG, sendo favorecido pela maior aproximação e atração do resíduo de arginina presente nos peptídeos com a carga negativa extra das unidades de POPG.Submitted by Luciana Ferreira (lucgeral@gmail.com) on 2016-03-04T11:59:28Z No. of bitstreams: 2 Dissertação - Carolina Oliveira Matos - 2015.pdf: 5441476 bytes, checksum: 86d4c7bb5073b76109534a172cf579e5 (MD5) license_rdf: 23148 bytes, checksum: 9da0b6dfac957114c6a7714714b86306 (MD5)Approved for entry into archive by Luciana Ferreira (lucgeral@gmail.com) on 2016-03-04T12:01:47Z (GMT) No. of bitstreams: 2 Dissertação - Carolina Oliveira Matos - 2015.pdf: 5441476 bytes, checksum: 86d4c7bb5073b76109534a172cf579e5 (MD5) license_rdf: 23148 bytes, checksum: 9da0b6dfac957114c6a7714714b86306 (MD5)Made available in DSpace on 2016-03-04T12:01:47Z (GMT). No. of bitstreams: 2 Dissertação - Carolina Oliveira Matos - 2015.pdf: 5441476 bytes, checksum: 86d4c7bb5073b76109534a172cf579e5 (MD5) license_rdf: 23148 bytes, checksum: 9da0b6dfac957114c6a7714714b86306 (MD5) Previous issue date: 2015-07-31Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPESapplication/pdfporUniversidade Federal de GoiásPrograma de Pós-graduação em Química (IQ)UFGBrasilInstituto de Química - IQ (RG)http://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessNMRPeptideAntimicrobialNMRPeptideAntimicrobialCIENCIAS EXATAS E DA TERRA::QUIMICASíntese, caracterização e estudos estruturais de análogos do peptídeo antimicrobiano Cn-AMP1 em meios biomiméticosSynthesis, characterization and structural study of similarpeptide antimicrobial Cn-AMP1 in media biomimeticinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesis663693921325415158600600600600782606674374119727815717003253031171952075167498588264571reponame:Repositório Institucional da UFGinstname:Universidade Federal de Goiás (UFG)instacron:UFGORIGINALDissertação - Carolina Oliveira Matos - 2015.pdfDissertação - Carolina Oliveira Matos - 2015.pdfapplication/pdf5441476http://repositorio.bc.ufg.br/tede/bitstreams/490393ab-e6ad-4852-b5ff-65a17469c424/download86d4c7bb5073b76109534a172cf579e5MD55LICENSElicense.txtlicense.txttext/plain; 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dc.title.por.fl_str_mv |
Síntese, caracterização e estudos estruturais de análogos do peptídeo antimicrobiano Cn-AMP1 em meios biomiméticos |
dc.title.alternative.eng.fl_str_mv |
Synthesis, characterization and structural study of similarpeptide antimicrobial Cn-AMP1 in media biomimetic |
title |
Síntese, caracterização e estudos estruturais de análogos do peptídeo antimicrobiano Cn-AMP1 em meios biomiméticos |
spellingShingle |
Síntese, caracterização e estudos estruturais de análogos do peptídeo antimicrobiano Cn-AMP1 em meios biomiméticos Matos, Carolina Oliveira NMR Peptide Antimicrobial NMR Peptide Antimicrobial CIENCIAS EXATAS E DA TERRA::QUIMICA |
title_short |
Síntese, caracterização e estudos estruturais de análogos do peptídeo antimicrobiano Cn-AMP1 em meios biomiméticos |
title_full |
Síntese, caracterização e estudos estruturais de análogos do peptídeo antimicrobiano Cn-AMP1 em meios biomiméticos |
title_fullStr |
Síntese, caracterização e estudos estruturais de análogos do peptídeo antimicrobiano Cn-AMP1 em meios biomiméticos |
title_full_unstemmed |
Síntese, caracterização e estudos estruturais de análogos do peptídeo antimicrobiano Cn-AMP1 em meios biomiméticos |
title_sort |
Síntese, caracterização e estudos estruturais de análogos do peptídeo antimicrobiano Cn-AMP1 em meios biomiméticos |
author |
Matos, Carolina Oliveira |
author_facet |
Matos, Carolina Oliveira |
author_role |
author |
dc.contributor.advisor1.fl_str_mv |
Lião, Luciano Morais |
dc.contributor.advisor1Lattes.fl_str_mv |
http://lattes.cnpq.br/2647529909397336 |
dc.contributor.advisor-co1.fl_str_mv |
Verly, Rodrigo Moreira |
dc.contributor.advisor-co1Lattes.fl_str_mv |
http://lattes.cnpq.br/9970931211285890 |
dc.contributor.referee1.fl_str_mv |
Lião, Luciano Morais |
dc.contributor.referee2.fl_str_mv |
Resende, Jarbas Magalhães |
dc.contributor.referee3.fl_str_mv |
Fernandes, Kátia Flávia |
dc.contributor.authorLattes.fl_str_mv |
http://lattes.cnpq.br/1172711137284074 |
dc.contributor.author.fl_str_mv |
Matos, Carolina Oliveira |
contributor_str_mv |
Lião, Luciano Morais Verly, Rodrigo Moreira Lião, Luciano Morais Resende, Jarbas Magalhães Fernandes, Kátia Flávia |
dc.subject.por.fl_str_mv |
NMR Peptide Antimicrobial |
topic |
NMR Peptide Antimicrobial NMR Peptide Antimicrobial CIENCIAS EXATAS E DA TERRA::QUIMICA |
dc.subject.eng.fl_str_mv |
NMR Peptide Antimicrobial |
dc.subject.cnpq.fl_str_mv |
CIENCIAS EXATAS E DA TERRA::QUIMICA |
description |
Antimicrobial peptides are part of the innate defense of several organisms, and represent candidate drugs in their natural form, allowing for the development of modified peptides with improved pharmacological profiles. In this context, this study aimed of the synthesis of Cn-AMP1, an antimicrobial peptide naturally isolated from green coconut water, which has activity against fungi, gram-positive and gram-negative bacterias well as effects on the proliferation of cancer cells and low toxicity to mammalian cells, the analogs [Trp9] Cn-AMP1 and [Gly9] Cn-AMP1 were also obtained by solid phase peptide synthesis using the Fmoc strategy. The characterization and purification of the peptides were performed by mass spectrometry and high-performance liquid chromatography. Structural studies of the peptides were performed by circular dichroism (CD) and nuclear magnetic resonance (NMR) in the presence of biomimetic enviroments. CD and NMR results indicated that the peptides do not present preferential conformations in aqueous solutions, however adopt helical conformations in membrane mimetic environments. CD studies have shown that Cn-AMP1 and [Gly9] Cn-AMP1 do not adopt show defined conformation in the presence of DPC micelles at different pH values, however the peptide [Trp9] Cn- AMP1 showed a small a-helical content in the presence of 100mM DPC. In the presence of SDS the spectra of all peptides showed helical profiles at both pH 4, pH 7 as well as in the absence of buffer. NMR experiments indicated the interaction of the peptides [Trp9] Cn-AMP1 and [Gly9] Cn-AMP1 with SDS micelles at pH 4 (25 °C), and structural calculations indicated that [Trp9]Cn- AMP1 adopts an α-helical conformation between Val2-Gly8, and that [Gly9] Cn- AMP1 adopts an α -helical conformation between Val2-Arg5. Dynamic light scattering and zeta potential experiments were performed to investigate the effect of addition of peptides into phospholipid vesicles. All of the peptides caused variations on the POPC:POPG (3:1) and POPC, LUVs hydrodynamic radios, however major changes were observed for the anionic vesicles due to the strong interaction between the arginine residue of the peptides and the negativelly charge of membrane. |
publishDate |
2015 |
dc.date.issued.fl_str_mv |
2015-07-31 |
dc.date.accessioned.fl_str_mv |
2016-03-04T12:01:47Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
format |
masterThesis |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
MATOS, C. O. Síntese, caracterização e estudos estruturais de análogos do peptídeo antimicrobiano Cn-AMP1 em meios biomiméticos. 2015. 108 f. Dissertação (Mestrado em Química) - Universidade Federal de Goiás, Goiânia, 2015. |
dc.identifier.uri.fl_str_mv |
http://repositorio.bc.ufg.br/tede/handle/tede/5298 |
dc.identifier.dark.fl_str_mv |
ark:/38995/001300000dbpx |
identifier_str_mv |
MATOS, C. O. Síntese, caracterização e estudos estruturais de análogos do peptídeo antimicrobiano Cn-AMP1 em meios biomiméticos. 2015. 108 f. Dissertação (Mestrado em Química) - Universidade Federal de Goiás, Goiânia, 2015. ark:/38995/001300000dbpx |
url |
http://repositorio.bc.ufg.br/tede/handle/tede/5298 |
dc.language.iso.fl_str_mv |
por |
language |
por |
dc.relation.program.fl_str_mv |
663693921325415158 |
dc.relation.confidence.fl_str_mv |
600 600 600 600 |
dc.relation.department.fl_str_mv |
7826066743741197278 |
dc.relation.cnpq.fl_str_mv |
1571700325303117195 |
dc.relation.sponsorship.fl_str_mv |
2075167498588264571 |
dc.rights.driver.fl_str_mv |
http://creativecommons.org/licenses/by-nc-nd/4.0/ info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
http://creativecommons.org/licenses/by-nc-nd/4.0/ |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Universidade Federal de Goiás |
dc.publisher.program.fl_str_mv |
Programa de Pós-graduação em Química (IQ) |
dc.publisher.initials.fl_str_mv |
UFG |
dc.publisher.country.fl_str_mv |
Brasil |
dc.publisher.department.fl_str_mv |
Instituto de Química - IQ (RG) |
publisher.none.fl_str_mv |
Universidade Federal de Goiás |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da UFG instname:Universidade Federal de Goiás (UFG) instacron:UFG |
instname_str |
Universidade Federal de Goiás (UFG) |
instacron_str |
UFG |
institution |
UFG |
reponame_str |
Repositório Institucional da UFG |
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Repositório Institucional da UFG |
bitstream.url.fl_str_mv |
http://repositorio.bc.ufg.br/tede/bitstreams/490393ab-e6ad-4852-b5ff-65a17469c424/download http://repositorio.bc.ufg.br/tede/bitstreams/6fc687e1-8e08-4142-8954-e5e52fc90886/download http://repositorio.bc.ufg.br/tede/bitstreams/14688416-1a9f-47dd-9495-013d7de54df0/download http://repositorio.bc.ufg.br/tede/bitstreams/7892e5cc-d11a-4516-8200-c902d4cde7a4/download http://repositorio.bc.ufg.br/tede/bitstreams/8f69d136-551e-468c-b5b2-579f5c2e7a76/download |
bitstream.checksum.fl_str_mv |
86d4c7bb5073b76109534a172cf579e5 bd3efa91386c1718a7f26a329fdcb468 4afdbb8c545fd630ea7db775da747b2f ef48816a10f2d45f2e2fee2f478e2faf 9da0b6dfac957114c6a7714714b86306 |
bitstream.checksumAlgorithm.fl_str_mv |
MD5 MD5 MD5 MD5 MD5 |
repository.name.fl_str_mv |
Repositório Institucional da UFG - Universidade Federal de Goiás (UFG) |
repository.mail.fl_str_mv |
tasesdissertacoes.bc@ufg.br |
_version_ |
1815172641660600320 |