Análise de polimorfismos em genes de detoxificação e reparo em indivíduos de municípios goianos
Autor(a) principal: | |
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Data de Publicação: | 2017 |
Tipo de documento: | Dissertação |
Idioma: | por |
Título da fonte: | Repositório Institucional da UFG |
dARK ID: | ark:/38995/0013000001sm7 |
Texto Completo: | http://repositorio.bc.ufg.br/tede/handle/tede/7152 |
Resumo: | In Brazilian agriculture, the State of Goiás is one of the largest producers of corn, beans, cotton, sorghum, sugarcane and soybeans, with 75% of its exports composed of products related to agriculture and minerals. Thus, a large part of the economy of the State of Goiás is focused on rural activities, justifying the intense use of pesticides in the region. These pesticides will be metabolized in the liver in two main phases, the first one of bioactivation converting the original substances into more polar metabolites, through oxidation reduction reactions, hydrogenation and dehalogenation, most of the reactions are made by the cytochrome P450 (CYP) superfamily And the second phase in which conjugation reactions occur, in which metabolites are converted into non-toxic products. Agrochemicals are also known to cause various human health damage, such as cancer, cholinergic syndrome, Parkinson's disease and Alzheimer's as well as cytogenetic changes such as DNA damage and chromosome translocations. Thus, polymorphisms in enzymes acting in the path of detoxification and DNA repair may be important biomarkers of diseases in individuals exposed to pesticides. The present study sequenced 3 regions of the following genes: CYP2E1 (promoter region), CYP1A1 (exon 7) and OGG1 (intron region) of 260 individuals from Goiânia and Aparecida de Goiânia, GO. 20 ml of blood was collected, DNA was extracted using commercial kits and PCR was performed. Subsequently, the amplicons were sequenced by the automated Sanger method and compared to the 1000 Genome project. The population of this study was composed of 159 men and 101 women, mean age of 38 years. A total of 5 SNP's were found in the Goias population, being rs2031922 (change of C> T and frequency of the T allele of 0.05) of the CYP2E1 gene, rs1048943 (change of A> G and frequency of the G allele of 0.1 ) And rs1799814 (change of C> A and frequency of allele A of 0.07) of the CYP1A1 gene and rs1052133 (change of C> G and frequency of allele G of 0.2) and rs293795 (change of A> G and frequency Of the 0.18 T allele) of the OGG1 gene. All loci did not deviate from the Hardy-Weinberg equilibrium, nor was a statistically significant difference between age and genotype composition. The rs1048943 and rs1799814 loci of the CYP1A1 gene showed a moderate disequilibrium linkage and the rs1052133 and rs293795 loci of the OGG1 gene showed a strong disequilibrium linkage. The haplotype inference revealed a frequency of the haplotypes of loci rs1048943 and rs1799814 of A / C = 0.8, G / A = 0.12, A / A = 0.07 of the CYP1A1 gene. The haplotypes of the loci rs293795 and rs1052133 had A / G = 0.07, A / C = 0.8, G / C = 0.13. Due to the important participation in detoxification or DNA repair and relationship with pesticides, SNPs rs2031920 of the CYP2E1 gene, rs1048943 of CYP1A1 and rs1052133 of the OGG1 gene are potential biomarkers of susceptibility to disease development in individuals who have contact with these xenobiotics |
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Silva, Daniela de Melo ehttp://lattes.cnpq.br/9895211901348365Soares, Thannya NascimentoRodrigues, Flavia Melohttp://lattes.cnpq.br/2884712100894721Alves, Alessandro Arruda2017-04-17T11:51:37Z2017-03-10ALVES, A. A. Análise de polimorfismos em genes de detoxificação e reparo em indivíduos de municípios goianos. 2017. 74 f. Dissertação (Mestrado em Genética e Biologia Molecular) - Universidade Federal de Goiás, Goiânia, 2017.http://repositorio.bc.ufg.br/tede/handle/tede/7152ark:/38995/0013000001sm7In Brazilian agriculture, the State of Goiás is one of the largest producers of corn, beans, cotton, sorghum, sugarcane and soybeans, with 75% of its exports composed of products related to agriculture and minerals. Thus, a large part of the economy of the State of Goiás is focused on rural activities, justifying the intense use of pesticides in the region. These pesticides will be metabolized in the liver in two main phases, the first one of bioactivation converting the original substances into more polar metabolites, through oxidation reduction reactions, hydrogenation and dehalogenation, most of the reactions are made by the cytochrome P450 (CYP) superfamily And the second phase in which conjugation reactions occur, in which metabolites are converted into non-toxic products. Agrochemicals are also known to cause various human health damage, such as cancer, cholinergic syndrome, Parkinson's disease and Alzheimer's as well as cytogenetic changes such as DNA damage and chromosome translocations. Thus, polymorphisms in enzymes acting in the path of detoxification and DNA repair may be important biomarkers of diseases in individuals exposed to pesticides. The present study sequenced 3 regions of the following genes: CYP2E1 (promoter region), CYP1A1 (exon 7) and OGG1 (intron region) of 260 individuals from Goiânia and Aparecida de Goiânia, GO. 20 ml of blood was collected, DNA was extracted using commercial kits and PCR was performed. Subsequently, the amplicons were sequenced by the automated Sanger method and compared to the 1000 Genome project. The population of this study was composed of 159 men and 101 women, mean age of 38 years. A total of 5 SNP's were found in the Goias population, being rs2031922 (change of C> T and frequency of the T allele of 0.05) of the CYP2E1 gene, rs1048943 (change of A> G and frequency of the G allele of 0.1 ) And rs1799814 (change of C> A and frequency of allele A of 0.07) of the CYP1A1 gene and rs1052133 (change of C> G and frequency of allele G of 0.2) and rs293795 (change of A> G and frequency Of the 0.18 T allele) of the OGG1 gene. All loci did not deviate from the Hardy-Weinberg equilibrium, nor was a statistically significant difference between age and genotype composition. The rs1048943 and rs1799814 loci of the CYP1A1 gene showed a moderate disequilibrium linkage and the rs1052133 and rs293795 loci of the OGG1 gene showed a strong disequilibrium linkage. The haplotype inference revealed a frequency of the haplotypes of loci rs1048943 and rs1799814 of A / C = 0.8, G / A = 0.12, A / A = 0.07 of the CYP1A1 gene. The haplotypes of the loci rs293795 and rs1052133 had A / G = 0.07, A / C = 0.8, G / C = 0.13. Due to the important participation in detoxification or DNA repair and relationship with pesticides, SNPs rs2031920 of the CYP2E1 gene, rs1048943 of CYP1A1 and rs1052133 of the OGG1 gene are potential biomarkers of susceptibility to disease development in individuals who have contact with these xenobioticsNa agricultura brasileira o Estado de Goiás é um dos maiores produtores de milho, feijão, algodão, sorgo, cana-de-açúcar e soja, tendo 75% de suas exportações compostas de produtos ligados às áreas de agricultura, agropecuária e minérios. Dessa forma, grande parte da economia do Estado de Goiás é voltada para atividades rurais, justificando o intenso uso de agrotóxicos na região. Esses agrotóxicos serão metabolizados no fígado em 2 fases principais, a primeira de bioativação convertendo as substâncias originais em metabolitos mais polares, por meio de reações de oxidação redução, hidrogenação e desalogenação, grande parte das reações são feitas pela superfamília de enzimas citocromo P450 (CYP) e a segunda fase na qual ocorrem reações de conjugação, na qual metabolitos são convertidos em produtos atóxicos. Os agrotóxicos também são conhecidos por causarem diversos danos à saúde humana, tais como, câncer, síndrome colinérgica, mal de Parkinson e Alzheimer assim como alterações citogenéticas, tais como dano no DNA e translocações cromossômicas. Assim, polimorfismos nas enzimas atuantes em vias de detoxificação e reparo de DNA podem ser importantes biomarcadores de doenças em indivíduos com exposição a agrotóxicos. O presente estudo sequenciou 3 regiões dos seguintes genes: CYP2E1 (região promotora), CYP1A1 (éxon 7) e OGG1 (região de íntron) de 260 indivíduos de Goiânia e Aparecida de Goiânia, GO. Foram coletados 20 ml de sangue, o DNA foi extraído com o uso de kits comercias e foi realizada a PCR. Posteriormente, os amplicons foram sequenciados pelo método de Sanger automatizado e comparados com a população do projeto 1000 genomas. A população deste estudo foi composta por 159 homens e 101 mulheres, médias de idade de 38 anos. Foram encontrados na população goiana um total de 5 SNP’s, sendo eles rs2031922 (mudança de C>T e frequência do alelo T de 0,05) do gene CYP2E1, rs1048943 (mudança de A>G e frequência do alelo G de 0,1) e rs1799814 (mudança de C>A e frequência do alelo A de 0,07) do gene CYP1A1 e rs1052133 (mudança de C>G e frequência do alelo G de 0,2) e rs293795 (mudança de A>G e frequência do alelo T de 0,18) do gene OGG1. Todos os locos não desviaram do equilíbrio de Hardy-Weinberg, também não houve diferença estatisticamente significativa entre a idade e a composição genotípica. Os locos rs1048943 e rs1799814 do gene CYP1A1 apresentaram um desequilíbrio de ligação moderado e os locos rs1052133 e rs293795 do gene OGG1 apresentaram um desequilíbrio de ligação forte. A inferência haplotípica revelou uma frequência dos haplótipos dos locos rs1048943 e rs1799814 de A/C=0,8, G/A= 0,12, A/A=0,07 do gene CYP1A1. Os haplótipos dos locos rs293795 e rs1052133 apresentaram frequência de A/G=0,07, A/C=0,8, G/C=0,13. Devido a importante participação em vias de detoxificação ou reparo de DNA e relação com agrotóxicos, os SNP’s rs2031920 do gene CYP2E1, rs1048943 do CYP1A1 e o rs1052133 do gene OGG1 são potenciais biomarcadores de susceptibilidade ao desenvolvimento de doenças em indivíduos que possuem contato com estes xenobióticos.Submitted by Luciana Ferreira (lucgeral@gmail.com) on 2017-04-17T11:51:08Z No. of bitstreams: 2 Dissertação - Alessandro Arruda Alves - 2017.pdf: 2612408 bytes, checksum: c21fd834dc73ac66ba55f32ba689f6f3 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5)Approved for entry into archive by Luciana Ferreira (lucgeral@gmail.com) on 2017-04-17T11:51:37Z (GMT) No. of bitstreams: 2 Dissertação - Alessandro Arruda Alves - 2017.pdf: 2612408 bytes, checksum: c21fd834dc73ac66ba55f32ba689f6f3 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5)Made available in DSpace on 2017-04-17T11:51:37Z (GMT). No. of bitstreams: 2 Dissertação - Alessandro Arruda Alves - 2017.pdf: 2612408 bytes, checksum: c21fd834dc73ac66ba55f32ba689f6f3 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5) Previous issue date: 2017-03-10Fundação de Amparo à Pesquisa do Estado de Goiás - FAPEGapplication/pdfporUniversidade Federal de GoiásPrograma de Pós-graduação em Genética e Biologia MolecularUFGBrasilInstituto de Ciências Biológicas - ICB (RG)http://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessDetoxificaçãoExposiçãoPolimorfismosReparoSusceptibilidadeXenobióticosDetoxificationExposurePolymorphismsRepairSusceptibilityXenobioticsCIENCIAS BIOLOGICAS::GENETICAAnálise de polimorfismos em genes de detoxificação e reparo em indivíduos de municípios goianosAnalysis of polymorphisms in genses of detoxification and repair in individuals in goian municipalitiesinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesis7015780075895009588600600600600-3872772117827373404-5518144268585252051-961409807440757778reponame:Repositório Institucional da UFGinstname:Universidade Federal de Goiás (UFG)instacron:UFGLICENSElicense.txtlicense.txttext/plain; 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dc.title.por.fl_str_mv |
Análise de polimorfismos em genes de detoxificação e reparo em indivíduos de municípios goianos |
dc.title.alternative.eng.fl_str_mv |
Analysis of polymorphisms in genses of detoxification and repair in individuals in goian municipalities |
title |
Análise de polimorfismos em genes de detoxificação e reparo em indivíduos de municípios goianos |
spellingShingle |
Análise de polimorfismos em genes de detoxificação e reparo em indivíduos de municípios goianos Alves, Alessandro Arruda Detoxificação Exposição Polimorfismos Reparo Susceptibilidade Xenobióticos Detoxification Exposure Polymorphisms Repair Susceptibility Xenobiotics CIENCIAS BIOLOGICAS::GENETICA |
title_short |
Análise de polimorfismos em genes de detoxificação e reparo em indivíduos de municípios goianos |
title_full |
Análise de polimorfismos em genes de detoxificação e reparo em indivíduos de municípios goianos |
title_fullStr |
Análise de polimorfismos em genes de detoxificação e reparo em indivíduos de municípios goianos |
title_full_unstemmed |
Análise de polimorfismos em genes de detoxificação e reparo em indivíduos de municípios goianos |
title_sort |
Análise de polimorfismos em genes de detoxificação e reparo em indivíduos de municípios goianos |
author |
Alves, Alessandro Arruda |
author_facet |
Alves, Alessandro Arruda |
author_role |
author |
dc.contributor.advisor1.fl_str_mv |
Silva, Daniela de Melo e |
dc.contributor.advisor1Lattes.fl_str_mv |
http://lattes.cnpq.br/9895211901348365 |
dc.contributor.referee1.fl_str_mv |
Soares, Thannya Nascimento |
dc.contributor.referee2.fl_str_mv |
Rodrigues, Flavia Melo |
dc.contributor.authorLattes.fl_str_mv |
http://lattes.cnpq.br/2884712100894721 |
dc.contributor.author.fl_str_mv |
Alves, Alessandro Arruda |
contributor_str_mv |
Silva, Daniela de Melo e Soares, Thannya Nascimento Rodrigues, Flavia Melo |
dc.subject.por.fl_str_mv |
Detoxificação Exposição Polimorfismos Reparo Susceptibilidade Xenobióticos |
topic |
Detoxificação Exposição Polimorfismos Reparo Susceptibilidade Xenobióticos Detoxification Exposure Polymorphisms Repair Susceptibility Xenobiotics CIENCIAS BIOLOGICAS::GENETICA |
dc.subject.eng.fl_str_mv |
Detoxification Exposure Polymorphisms Repair Susceptibility Xenobiotics |
dc.subject.cnpq.fl_str_mv |
CIENCIAS BIOLOGICAS::GENETICA |
description |
In Brazilian agriculture, the State of Goiás is one of the largest producers of corn, beans, cotton, sorghum, sugarcane and soybeans, with 75% of its exports composed of products related to agriculture and minerals. Thus, a large part of the economy of the State of Goiás is focused on rural activities, justifying the intense use of pesticides in the region. These pesticides will be metabolized in the liver in two main phases, the first one of bioactivation converting the original substances into more polar metabolites, through oxidation reduction reactions, hydrogenation and dehalogenation, most of the reactions are made by the cytochrome P450 (CYP) superfamily And the second phase in which conjugation reactions occur, in which metabolites are converted into non-toxic products. Agrochemicals are also known to cause various human health damage, such as cancer, cholinergic syndrome, Parkinson's disease and Alzheimer's as well as cytogenetic changes such as DNA damage and chromosome translocations. Thus, polymorphisms in enzymes acting in the path of detoxification and DNA repair may be important biomarkers of diseases in individuals exposed to pesticides. The present study sequenced 3 regions of the following genes: CYP2E1 (promoter region), CYP1A1 (exon 7) and OGG1 (intron region) of 260 individuals from Goiânia and Aparecida de Goiânia, GO. 20 ml of blood was collected, DNA was extracted using commercial kits and PCR was performed. Subsequently, the amplicons were sequenced by the automated Sanger method and compared to the 1000 Genome project. The population of this study was composed of 159 men and 101 women, mean age of 38 years. A total of 5 SNP's were found in the Goias population, being rs2031922 (change of C> T and frequency of the T allele of 0.05) of the CYP2E1 gene, rs1048943 (change of A> G and frequency of the G allele of 0.1 ) And rs1799814 (change of C> A and frequency of allele A of 0.07) of the CYP1A1 gene and rs1052133 (change of C> G and frequency of allele G of 0.2) and rs293795 (change of A> G and frequency Of the 0.18 T allele) of the OGG1 gene. All loci did not deviate from the Hardy-Weinberg equilibrium, nor was a statistically significant difference between age and genotype composition. The rs1048943 and rs1799814 loci of the CYP1A1 gene showed a moderate disequilibrium linkage and the rs1052133 and rs293795 loci of the OGG1 gene showed a strong disequilibrium linkage. The haplotype inference revealed a frequency of the haplotypes of loci rs1048943 and rs1799814 of A / C = 0.8, G / A = 0.12, A / A = 0.07 of the CYP1A1 gene. The haplotypes of the loci rs293795 and rs1052133 had A / G = 0.07, A / C = 0.8, G / C = 0.13. Due to the important participation in detoxification or DNA repair and relationship with pesticides, SNPs rs2031920 of the CYP2E1 gene, rs1048943 of CYP1A1 and rs1052133 of the OGG1 gene are potential biomarkers of susceptibility to disease development in individuals who have contact with these xenobiotics |
publishDate |
2017 |
dc.date.accessioned.fl_str_mv |
2017-04-17T11:51:37Z |
dc.date.issued.fl_str_mv |
2017-03-10 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
format |
masterThesis |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
ALVES, A. A. Análise de polimorfismos em genes de detoxificação e reparo em indivíduos de municípios goianos. 2017. 74 f. Dissertação (Mestrado em Genética e Biologia Molecular) - Universidade Federal de Goiás, Goiânia, 2017. |
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http://repositorio.bc.ufg.br/tede/handle/tede/7152 |
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ark:/38995/0013000001sm7 |
identifier_str_mv |
ALVES, A. A. Análise de polimorfismos em genes de detoxificação e reparo em indivíduos de municípios goianos. 2017. 74 f. Dissertação (Mestrado em Genética e Biologia Molecular) - Universidade Federal de Goiás, Goiânia, 2017. ark:/38995/0013000001sm7 |
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http://repositorio.bc.ufg.br/tede/handle/tede/7152 |
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Universidade Federal de Goiás |
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UFG |
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Brasil |
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Instituto de Ciências Biológicas - ICB (RG) |
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Universidade Federal de Goiás |
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