Caracterização da produção científica sobre DNA barcoding no estudo de plantas
Autor(a) principal: | |
---|---|
Data de Publicação: | 2021 |
Tipo de documento: | Dissertação |
Idioma: | por |
Título da fonte: | Repositório Institucional da UFG |
Texto Completo: | http://repositorio.bc.ufg.br/tede/handle/tede/11354 |
Resumo: | The application of the DNA barcoding has been shown to be successful in studies of biodiversity surveys, biomonitoring of invasive species, forensic analysis to assess food security and medicinal products based on medicinal plants, monitoring the illegal trade in threatened species, studies about food ecology, conservation initiatives, etc. The present study had as main objective to raise and systematize the scientific production on the use of DNA barcoding in plants. For this purpose, a search was carried out in the Web of Science database, using as keywords combined the regions annotated in the chloroplast and nuclear genome of Arabidopsis thaliana (model species), which are used as DNA barcoding markers, associated with the expressions: “DNA barcoding” OR “barcoding” OR “DNA barcode” OR “barcode” OR “metabarcoding”. The search was carried out covering the complete period of publication of the database until 2020. The recovered files were filtered, being considered only original articles, excluding review articles, as well as those that did not correspond to the scope of the study. A total of 1,897 articles were retrieved, of which 1,073 were within the criteria’s inclusion. As the first article was published in 2005, the analysis covered the period between 2005 and 2020. The studies were published in a total of 309 sources, with a general average of publication per year equal to 5.21. Scientific production varied over the period, but always with an increasing trend. The average number of authors per document was 3.49, since each article mostly has more than one author, which explains the average number of coauthors per document (5.34). However, out of a total of 3,747 registered authors, the number of articles per author was low, with an average equal to 0.29. China stands out as the main country, according to the origin of the authors, who has contributed with works involving the application of the DNA barcoding technique in the study of plants, being also the most cited country. The most relevant authors, based on the number of publications, were the Chinese: Chen SL, Song J, Yao H, with the article by Chen et al. (2010) the second most cited globally. The journals that showed greater prominence in relation to the number of articles published, considering the subject, were respectively: Plos One, Molecular Ecology Resources and Scientific Reports. It was possible to characterize four groups of documents regarding the use / application of the technique, respectively: Description/delimitation of species (545), Forensic Genetics (275), Development/methodology (163), Ecology (90) and 75 articles were categorized in up to two different groups. The studies grouped in the most prominent category (Description/delimitation of species), range from delimiting species from complex groups to the validation of species with properties of economic interest and species already cataloged in herbariums. The application possibilities have been expanded due to the development of High Throughput Sequencing technologies, opening doors for studies applied to Ecology, Evolution and Forensic Genetics and which use in addition to DNA barcoding, the metabarcoding. |
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Telles, Mariana Pires de Camposhttp://lattes.cnpq.br/4648436798023532 Gonçalves, Ariany Rosahttp://lattes.cnpq.br/6401185899301616Telles, Mariana Pires de CamposNunes, RhewterBraga, Ramila dos Santoshttp://lattes.cnpq.br/3174694547963239Batista, Eliane Cotrim2021-05-11T10:32:17Z2021-05-11T10:32:17Z2021-04-22BATISTA, E. C. Caracterização da produção científica sobre DNA barcoding no estudo de plantas. 2021. 61 f. Dissertação (Mestrado em Genética e Biologia Molecular) - Universidade Federal de Goiás, Goiânia, 2021.http://repositorio.bc.ufg.br/tede/handle/tede/11354The application of the DNA barcoding has been shown to be successful in studies of biodiversity surveys, biomonitoring of invasive species, forensic analysis to assess food security and medicinal products based on medicinal plants, monitoring the illegal trade in threatened species, studies about food ecology, conservation initiatives, etc. The present study had as main objective to raise and systematize the scientific production on the use of DNA barcoding in plants. For this purpose, a search was carried out in the Web of Science database, using as keywords combined the regions annotated in the chloroplast and nuclear genome of Arabidopsis thaliana (model species), which are used as DNA barcoding markers, associated with the expressions: “DNA barcoding” OR “barcoding” OR “DNA barcode” OR “barcode” OR “metabarcoding”. The search was carried out covering the complete period of publication of the database until 2020. The recovered files were filtered, being considered only original articles, excluding review articles, as well as those that did not correspond to the scope of the study. A total of 1,897 articles were retrieved, of which 1,073 were within the criteria’s inclusion. As the first article was published in 2005, the analysis covered the period between 2005 and 2020. The studies were published in a total of 309 sources, with a general average of publication per year equal to 5.21. Scientific production varied over the period, but always with an increasing trend. The average number of authors per document was 3.49, since each article mostly has more than one author, which explains the average number of coauthors per document (5.34). However, out of a total of 3,747 registered authors, the number of articles per author was low, with an average equal to 0.29. China stands out as the main country, according to the origin of the authors, who has contributed with works involving the application of the DNA barcoding technique in the study of plants, being also the most cited country. The most relevant authors, based on the number of publications, were the Chinese: Chen SL, Song J, Yao H, with the article by Chen et al. (2010) the second most cited globally. The journals that showed greater prominence in relation to the number of articles published, considering the subject, were respectively: Plos One, Molecular Ecology Resources and Scientific Reports. It was possible to characterize four groups of documents regarding the use / application of the technique, respectively: Description/delimitation of species (545), Forensic Genetics (275), Development/methodology (163), Ecology (90) and 75 articles were categorized in up to two different groups. The studies grouped in the most prominent category (Description/delimitation of species), range from delimiting species from complex groups to the validation of species with properties of economic interest and species already cataloged in herbariums. The application possibilities have been expanded due to the development of High Throughput Sequencing technologies, opening doors for studies applied to Ecology, Evolution and Forensic Genetics and which use in addition to DNA barcoding, the metabarcoding.A aplicação da técnica de DNA barcoding tem se mostrado bem-sucedida em estudos de levantamento da biodiversidade, biomonitoramento de espécies invasoras, análises forenses para avaliação de seguridade alimentar e de medicamentos à base de plantas medicinais, monitoramento do comércio ilegal de espécies ameaçadas, estudos sobre ecologia alimentar, iniciativas de conservação etc. O presente estudo teve como objetivo principal levantar e sistematizar a produção científica sobre o uso de DNA barcoding em plantas. Para tanto, foi realizada uma busca na base de dados Web of Science, utilizando como palavras-chave combinadas as regiões anotadas no genoma plastidial e nuclear de Arabidopsis thaliana (espécie modelo), que são utilizadas como marcadores de DNA barcoding, associadas às expressões: “DNA barcoding” OR “barcoding” OR “DNA barcode” OR “barcode” OR “metabarcoding”. A busca foi realizada abrangendo o período completo de publicação da base de dados até 2020. Os arquivos recuperados passaram por filtragem, sendo considerados apenas artigos originais, excluindo-se artigos de revisão, bem como os que não correspondiam ao escopo do estudo. Um total de 1.897 artigos foram recuperados, dos quais 1.073 estavam dentro dos critérios de inclusão. Como o primeiro artigo foi publicado em 2005, a análise abrangeu o período entre 2005 e 2020. Os estudos foram publicados em um total de 309 periódicos, com uma média geral de publicação por ano igual a 5,21. A produção científica variou ao longo do período, mas sempre com uma tendência crescente. A média de autores por documento foi de 3,49 visto que, cada artigo apresenta em sua grande maioria mais de um autor, o que explica a média de coautores por documento (5,34). No entanto, de um total de 3.747 autores registrados, o número de artigos por autor foi baixo, com uma média igual a 0,29. A China se destaca como principal país, de acordo com a origem dos autores, que tem contribuído com trabalhos envolvendo a aplicação da técnica de DNA barcoding no estudo de plantas, sendo também o país mais citado. Os autores mais relevantes, com base no número de publicações foram os chineses: Chen SL, Song J, Yao H, sendo o artigo de Chen et al. (2010) o segundo mais citado globalmente. Os periódicos que apresentaram maior destaque em relação ao número de artigos publicados, considerando o assunto, foram respectivamente: Plos One, Molecular Ecology Resources e Scientific Reports. Foi possível caracterizar quatro grupos de documentos quanto ao uso/aplicação da técnica, respectivamente: Descrição/delimitação de espécies (545), Genética Forense (275), Desenvolvimento/metodologia (163), Ecologia (90) e 75 artigos foram categorizados em até dois grupos diferentes. Os estudos agrupados na categoria de maior destaque (Descrição/delimitação de espécies), abordam desde delimitação de espécies de grupos complexos, até a validação de espécies com propriedades de interesse econômico e de espécies já catalogadas em herbários. As possibilidades de aplicação vêm sendo ampliadas graças ao desenvolvimento das tecnologias de Sequenciamento de Alto Rendimento, abrindo portas para estudos em Ecologia, Evolução e Genética Forense e que utilizam além de DNA barcoding, o metabarcoding.Submitted by Luciana Ferreira (lucgeral@gmail.com) on 2021-05-10T12:18:16Z No. of bitstreams: 2 license_rdf: 805 bytes, checksum: 4460e5956bc1d1639be9ae6146a50347 (MD5) Dissertação - Eliane Cotrim Batista - 2021.pdf: 2344260 bytes, checksum: 854e08604d1da723b048fe139236f4dd (MD5)Approved for entry into archive by Luciana Ferreira (lucgeral@gmail.com) on 2021-05-11T10:32:17Z (GMT) No. of bitstreams: 2 license_rdf: 805 bytes, checksum: 4460e5956bc1d1639be9ae6146a50347 (MD5) Dissertação - Eliane Cotrim Batista - 2021.pdf: 2344260 bytes, checksum: 854e08604d1da723b048fe139236f4dd (MD5)Made available in DSpace on 2021-05-11T10:32:17Z (GMT). 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dc.title.pt_BR.fl_str_mv |
Caracterização da produção científica sobre DNA barcoding no estudo de plantas |
dc.title.alternative.eng.fl_str_mv |
Characterization of sicentific production on the DNA barcoding in the study os plants |
title |
Caracterização da produção científica sobre DNA barcoding no estudo de plantas |
spellingShingle |
Caracterização da produção científica sobre DNA barcoding no estudo de plantas Batista, Eliane Cotrim Cienciometria DNA barcode ITS matK psbA-trnH rbcL Scienciometrics DNA barcode ITS matK psbA-trnH rbcL CIENCIAS BIOLOGICAS::GENETICA |
title_short |
Caracterização da produção científica sobre DNA barcoding no estudo de plantas |
title_full |
Caracterização da produção científica sobre DNA barcoding no estudo de plantas |
title_fullStr |
Caracterização da produção científica sobre DNA barcoding no estudo de plantas |
title_full_unstemmed |
Caracterização da produção científica sobre DNA barcoding no estudo de plantas |
title_sort |
Caracterização da produção científica sobre DNA barcoding no estudo de plantas |
author |
Batista, Eliane Cotrim |
author_facet |
Batista, Eliane Cotrim |
author_role |
author |
dc.contributor.advisor1.fl_str_mv |
Telles, Mariana Pires de Campos |
dc.contributor.advisor1Lattes.fl_str_mv |
http://lattes.cnpq.br/4648436798023532 |
dc.contributor.advisor-co1.fl_str_mv |
Gonçalves, Ariany Rosa |
dc.contributor.advisor-co1Lattes.fl_str_mv |
http://lattes.cnpq.br/6401185899301616 |
dc.contributor.referee1.fl_str_mv |
Telles, Mariana Pires de Campos |
dc.contributor.referee2.fl_str_mv |
Nunes, Rhewter |
dc.contributor.referee3.fl_str_mv |
Braga, Ramila dos Santos |
dc.contributor.authorLattes.fl_str_mv |
http://lattes.cnpq.br/3174694547963239 |
dc.contributor.author.fl_str_mv |
Batista, Eliane Cotrim |
contributor_str_mv |
Telles, Mariana Pires de Campos Gonçalves, Ariany Rosa Telles, Mariana Pires de Campos Nunes, Rhewter Braga, Ramila dos Santos |
dc.subject.por.fl_str_mv |
Cienciometria DNA barcode ITS matK psbA-trnH rbcL |
topic |
Cienciometria DNA barcode ITS matK psbA-trnH rbcL Scienciometrics DNA barcode ITS matK psbA-trnH rbcL CIENCIAS BIOLOGICAS::GENETICA |
dc.subject.eng.fl_str_mv |
Scienciometrics DNA barcode ITS matK psbA-trnH rbcL |
dc.subject.cnpq.fl_str_mv |
CIENCIAS BIOLOGICAS::GENETICA |
description |
The application of the DNA barcoding has been shown to be successful in studies of biodiversity surveys, biomonitoring of invasive species, forensic analysis to assess food security and medicinal products based on medicinal plants, monitoring the illegal trade in threatened species, studies about food ecology, conservation initiatives, etc. The present study had as main objective to raise and systematize the scientific production on the use of DNA barcoding in plants. For this purpose, a search was carried out in the Web of Science database, using as keywords combined the regions annotated in the chloroplast and nuclear genome of Arabidopsis thaliana (model species), which are used as DNA barcoding markers, associated with the expressions: “DNA barcoding” OR “barcoding” OR “DNA barcode” OR “barcode” OR “metabarcoding”. The search was carried out covering the complete period of publication of the database until 2020. The recovered files were filtered, being considered only original articles, excluding review articles, as well as those that did not correspond to the scope of the study. A total of 1,897 articles were retrieved, of which 1,073 were within the criteria’s inclusion. As the first article was published in 2005, the analysis covered the period between 2005 and 2020. The studies were published in a total of 309 sources, with a general average of publication per year equal to 5.21. Scientific production varied over the period, but always with an increasing trend. The average number of authors per document was 3.49, since each article mostly has more than one author, which explains the average number of coauthors per document (5.34). However, out of a total of 3,747 registered authors, the number of articles per author was low, with an average equal to 0.29. China stands out as the main country, according to the origin of the authors, who has contributed with works involving the application of the DNA barcoding technique in the study of plants, being also the most cited country. The most relevant authors, based on the number of publications, were the Chinese: Chen SL, Song J, Yao H, with the article by Chen et al. (2010) the second most cited globally. The journals that showed greater prominence in relation to the number of articles published, considering the subject, were respectively: Plos One, Molecular Ecology Resources and Scientific Reports. It was possible to characterize four groups of documents regarding the use / application of the technique, respectively: Description/delimitation of species (545), Forensic Genetics (275), Development/methodology (163), Ecology (90) and 75 articles were categorized in up to two different groups. The studies grouped in the most prominent category (Description/delimitation of species), range from delimiting species from complex groups to the validation of species with properties of economic interest and species already cataloged in herbariums. The application possibilities have been expanded due to the development of High Throughput Sequencing technologies, opening doors for studies applied to Ecology, Evolution and Forensic Genetics and which use in addition to DNA barcoding, the metabarcoding. |
publishDate |
2021 |
dc.date.accessioned.fl_str_mv |
2021-05-11T10:32:17Z |
dc.date.available.fl_str_mv |
2021-05-11T10:32:17Z |
dc.date.issued.fl_str_mv |
2021-04-22 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
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masterThesis |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
BATISTA, E. C. Caracterização da produção científica sobre DNA barcoding no estudo de plantas. 2021. 61 f. Dissertação (Mestrado em Genética e Biologia Molecular) - Universidade Federal de Goiás, Goiânia, 2021. |
dc.identifier.uri.fl_str_mv |
http://repositorio.bc.ufg.br/tede/handle/tede/11354 |
identifier_str_mv |
BATISTA, E. C. Caracterização da produção científica sobre DNA barcoding no estudo de plantas. 2021. 61 f. Dissertação (Mestrado em Genética e Biologia Molecular) - Universidade Federal de Goiás, Goiânia, 2021. |
url |
http://repositorio.bc.ufg.br/tede/handle/tede/11354 |
dc.language.iso.fl_str_mv |
por |
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por |
dc.relation.program.fl_str_mv |
56 |
dc.relation.confidence.fl_str_mv |
500 500 500 |
dc.relation.department.fl_str_mv |
23 |
dc.relation.cnpq.fl_str_mv |
166 |
dc.rights.driver.fl_str_mv |
Attribution-NonCommercial-NoDerivatives 4.0 International http://creativecommons.org/licenses/by-nc-nd/4.0/ info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
Attribution-NonCommercial-NoDerivatives 4.0 International http://creativecommons.org/licenses/by-nc-nd/4.0/ |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
Universidade Federal de Goiás |
dc.publisher.program.fl_str_mv |
Programa de Pós-graduação em Genética e Biologia Molecular (ICB) |
dc.publisher.initials.fl_str_mv |
UFG |
dc.publisher.country.fl_str_mv |
Brasil |
dc.publisher.department.fl_str_mv |
Instituto de Ciências Biológicas - ICB (RG) |
publisher.none.fl_str_mv |
Universidade Federal de Goiás |
dc.source.none.fl_str_mv |
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MD5 MD5 MD5 |
repository.name.fl_str_mv |
Repositório Institucional da UFG - Universidade Federal de Goiás (UFG) |
repository.mail.fl_str_mv |
tasesdissertacoes.bc@ufg.br |
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1798044319046696960 |