Análise da diversidade e divergência genética em clones de Eucalyptus spp. potencialmente importantes para Goiás

Detalhes bibliográficos
Autor(a) principal: Maciel, Kelly de Jesus Silva
Data de Publicação: 2014
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Repositório Institucional da UFG
Texto Completo: http://repositorio.bc.ufg.br/tede/handle/tede/6247
Resumo: The success of the Brazilian forestry is due largely to the excellent adaptability of the Eucalyptus genus to our climate and soil conditions. The recent expansion of eucalypts to the North and Midwest regions of Brazil presents challenges such as the need for clones adapted to drought, high temperatures and nutrient deficient soils of Cerrado. Three clonal trials were installed in different regions of Goiás State to evaluate the adaptability and growth of 113 elite clones of Eucalyptus spp. The objective of this study was to estimate the genetic diversity and divergence among 90 of the clones used in three clonal trials installed in different regions of Goiás State. The clones were genotyped with nine microsatellite loci organized into four "multiplex" systems for PCR. The amplified fragments were separated on the ABI–3100 platform (Applied Biosystems). The genotyping was performed using the GeneMapper software (Applied Biosystems). Genetic diversity parameters were estimated using the GDA and Fstat programs. The parameters number of alleles (A), expected heterozygosity (He), observed heterozygosity (Ho), intrapopulation fixation index (f) and allelic richness were estimated for each microsatellite locus. The results showed that all loci used in this study were highly polymorphic, with an average of 16.78 alleles per locus. The EMBRA28 and EMBRA3 loci showed the highest number of alleles (24 and 22). In general, for most markers, the observed heterozygosity had similar estimates when compared to the expected heterozigosity under Hardy-Weinberg Equilibrium. As a result, the fixation index (f) did not differ significantly from zero. Analyses of genetic structure of the clones was performed using the software Structure (version 2.3.4), with K values ranging from 1 to 10, with 10 interactions each. Results indicated presence of three distinct genetic groups (K = 3). However, there was no clear relationship between the populations obtained and the different species of Eucalyptus used in the study. This result can be explained by the clone sample is originated from breeding programs where crosses may have admixed populations, disrupting some genetic structures. Most importantly, the molecular analyses indicate extraordinary genetic diversity within the clonal trials installed in Goiás. This genetic diversity can be exploited for breeding new genetic material adapted to the Cerrado conditions.
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spelling Novaes, Evandrohttp://lattes.cnpq.br/0568272239145336Novaes, EvandroCoelho, Alexandre Siqueira GuedesVianello, Rosana Pereirahttp://lattes.cnpq.br/5581825368481231Maciel, Kelly de Jesus Silva2016-09-21T13:51:21Z2014-09-03MACIEL, K. J. S. Análise da diversidade e divergência genética em clones de Eucalyptus spp. potencialmente importantes para Goiás. 2014. 64 f. Dissertação (Mestrado em Genética e Melhoramento de Plantas) - Universidade Federal de Goiás, Goiânia, 2014.http://repositorio.bc.ufg.br/tede/handle/tede/6247The success of the Brazilian forestry is due largely to the excellent adaptability of the Eucalyptus genus to our climate and soil conditions. The recent expansion of eucalypts to the North and Midwest regions of Brazil presents challenges such as the need for clones adapted to drought, high temperatures and nutrient deficient soils of Cerrado. Three clonal trials were installed in different regions of Goiás State to evaluate the adaptability and growth of 113 elite clones of Eucalyptus spp. The objective of this study was to estimate the genetic diversity and divergence among 90 of the clones used in three clonal trials installed in different regions of Goiás State. The clones were genotyped with nine microsatellite loci organized into four "multiplex" systems for PCR. The amplified fragments were separated on the ABI–3100 platform (Applied Biosystems). The genotyping was performed using the GeneMapper software (Applied Biosystems). Genetic diversity parameters were estimated using the GDA and Fstat programs. The parameters number of alleles (A), expected heterozygosity (He), observed heterozygosity (Ho), intrapopulation fixation index (f) and allelic richness were estimated for each microsatellite locus. The results showed that all loci used in this study were highly polymorphic, with an average of 16.78 alleles per locus. The EMBRA28 and EMBRA3 loci showed the highest number of alleles (24 and 22). In general, for most markers, the observed heterozygosity had similar estimates when compared to the expected heterozigosity under Hardy-Weinberg Equilibrium. As a result, the fixation index (f) did not differ significantly from zero. Analyses of genetic structure of the clones was performed using the software Structure (version 2.3.4), with K values ranging from 1 to 10, with 10 interactions each. Results indicated presence of three distinct genetic groups (K = 3). However, there was no clear relationship between the populations obtained and the different species of Eucalyptus used in the study. This result can be explained by the clone sample is originated from breeding programs where crosses may have admixed populations, disrupting some genetic structures. Most importantly, the molecular analyses indicate extraordinary genetic diversity within the clonal trials installed in Goiás. This genetic diversity can be exploited for breeding new genetic material adapted to the Cerrado conditions.O sucesso do setor florestal brasileiro deve-se em grande parte à excelente adaptabilidade do gênero Eucalyptus ao nosso clima e condições do solo. A recente expansão do eucalipto para as regiões norte e central do Brasil requer pesquisas para que os clones se adaptem à seca, elevadas temperaturas e escassez de nutrientes nos solos do Cerrado. O objetivo deste estudo foi estimar a diversidade e divergência genética entre 90 dos clones utilizados em uma rede de testes clonais no estado de Goiás. Os clones foram genotipados com nove locos microssatélites organizados em quatro sistemas “multiplex” para PCR. Os fragmentos amplificados foram separados na plataforma ABI-3100 (Applied Biosystems). A genotipagem foi realizada utilizando o programa GeneMapper (Applied Biosystems). Os parâmetros de diversidade genética foram estimados usando os programas GDA e Fstat. Os parâmetros número de alelos (A), heterozigosidade esperada (He), heterozigosidade observada (Ho), índice de fixação intrapopulacional (f) e riqueza alélica foram estimados para cada loco microssatélite. Os resultados mostraram que todos os locos utilizados neste estudo foram altamente polimórficos, com média de 16,78 alelos por loco. A genotipagem dos locos EMBRA28 e EMBRA3 mostrou o maior número de alelos (24 e 22). De maneira geral, para a maioria dos locos estudados, a heterozigosidade observada apresentou estimativas semelhantes à heterozigosidade esperada dentro das condições do Equilíbrio de Hardy-Weimberg. Como resultado, o índice de fixação (f) não diferiu significativamente de zero. A análise da estrutura genética dos clones foi realizada utilizando o programa Structure (versão 2.3.4), com valores de K variando de 1 a 10, com 10 iterações cada. Os resultados indicaram a presença de três grupos genéticos distintos (K = 3). Entretanto, não foi observada uma clara relação entre as populações obtidas e as diferentes espécies de Eucalyptus utilizadas no estudo. Esse resultado pode ser explicado pelo fato da amostra de clone ser originada de programas de melhoramento, onde os cruzamentos recombinam o material genético das populações, desfazendo algumas estruturas genéticas. De forma mais importante, as análises moleculares indicaram grande diversidade genética dentre os clones que estão sendo avaliados em Goiás. Esta diversidade genética pode ser explorada em um programa de melhoramento para obtenção de novos materiais genéticos adaptados às condições do Cerrado.Submitted by Cássia Santos (cassia.bcufg@gmail.com) on 2016-09-21T11:48:08Z No. of bitstreams: 2 Dissertação - Kelly de Jesus Silva Maciel - 2016.pdf: 1521695 bytes, checksum: 28aafaf4cfd6bc606b92436f700782bd (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5)Approved for entry into archive by Luciana Ferreira (lucgeral@gmail.com) on 2016-09-21T13:51:20Z (GMT) No. of bitstreams: 2 Dissertação - Kelly de Jesus Silva Maciel - 2016.pdf: 1521695 bytes, checksum: 28aafaf4cfd6bc606b92436f700782bd (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5)Made available in DSpace on 2016-09-21T13:51:21Z (GMT). No. of bitstreams: 2 Dissertação - Kelly de Jesus Silva Maciel - 2016.pdf: 1521695 bytes, checksum: 28aafaf4cfd6bc606b92436f700782bd (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5) Previous issue date: 2014-09-03Fundação de Amparo à Pesquisa do Estado de Goiás - FAPEGapplication/pdfporUniversidade Federal de GoiásPrograma de Pós-graduação em Genética e Melhoramento de Plantas (EAEA)UFGBrasilEscola de Agronomia e Engenharia de Alimentos - EAEA (RG)http://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessEucalyptusTeste-clonalDiversidade genéticaMicrossatéliteEucalyptusClonal trialGenetic diversityMicrosatelliteFITOTECNIA::MELHORAMENTO VEGETALAnálise da diversidade e divergência genética em clones de Eucalyptus spp. potencialmente importantes para GoiásGenetic diversity and divergence among Eucalyptus spp. clones potencially adapted to Goiásinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesis-332509940436187311960060060060045006846957279284262615607299470131967-961409807440757778reponame:Repositório Institucional da UFGinstname:Universidade Federal de Goiás (UFG)instacron:UFGLICENSElicense.txtlicense.txttext/plain; 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dc.title.por.fl_str_mv Análise da diversidade e divergência genética em clones de Eucalyptus spp. potencialmente importantes para Goiás
dc.title.alternative.eng.fl_str_mv Genetic diversity and divergence among Eucalyptus spp. clones potencially adapted to Goiás
title Análise da diversidade e divergência genética em clones de Eucalyptus spp. potencialmente importantes para Goiás
spellingShingle Análise da diversidade e divergência genética em clones de Eucalyptus spp. potencialmente importantes para Goiás
Maciel, Kelly de Jesus Silva
Eucalyptus
Teste-clonal
Diversidade genética
Microssatélite
Eucalyptus
Clonal trial
Genetic diversity
Microsatellite
FITOTECNIA::MELHORAMENTO VEGETAL
title_short Análise da diversidade e divergência genética em clones de Eucalyptus spp. potencialmente importantes para Goiás
title_full Análise da diversidade e divergência genética em clones de Eucalyptus spp. potencialmente importantes para Goiás
title_fullStr Análise da diversidade e divergência genética em clones de Eucalyptus spp. potencialmente importantes para Goiás
title_full_unstemmed Análise da diversidade e divergência genética em clones de Eucalyptus spp. potencialmente importantes para Goiás
title_sort Análise da diversidade e divergência genética em clones de Eucalyptus spp. potencialmente importantes para Goiás
author Maciel, Kelly de Jesus Silva
author_facet Maciel, Kelly de Jesus Silva
author_role author
dc.contributor.advisor1.fl_str_mv Novaes, Evandro
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/0568272239145336
dc.contributor.referee1.fl_str_mv Novaes, Evandro
dc.contributor.referee2.fl_str_mv Coelho, Alexandre Siqueira Guedes
dc.contributor.referee3.fl_str_mv Vianello, Rosana Pereira
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/5581825368481231
dc.contributor.author.fl_str_mv Maciel, Kelly de Jesus Silva
contributor_str_mv Novaes, Evandro
Novaes, Evandro
Coelho, Alexandre Siqueira Guedes
Vianello, Rosana Pereira
dc.subject.por.fl_str_mv Eucalyptus
Teste-clonal
Diversidade genética
Microssatélite
topic Eucalyptus
Teste-clonal
Diversidade genética
Microssatélite
Eucalyptus
Clonal trial
Genetic diversity
Microsatellite
FITOTECNIA::MELHORAMENTO VEGETAL
dc.subject.eng.fl_str_mv Eucalyptus
Clonal trial
Genetic diversity
Microsatellite
dc.subject.cnpq.fl_str_mv FITOTECNIA::MELHORAMENTO VEGETAL
description The success of the Brazilian forestry is due largely to the excellent adaptability of the Eucalyptus genus to our climate and soil conditions. The recent expansion of eucalypts to the North and Midwest regions of Brazil presents challenges such as the need for clones adapted to drought, high temperatures and nutrient deficient soils of Cerrado. Three clonal trials were installed in different regions of Goiás State to evaluate the adaptability and growth of 113 elite clones of Eucalyptus spp. The objective of this study was to estimate the genetic diversity and divergence among 90 of the clones used in three clonal trials installed in different regions of Goiás State. The clones were genotyped with nine microsatellite loci organized into four "multiplex" systems for PCR. The amplified fragments were separated on the ABI–3100 platform (Applied Biosystems). The genotyping was performed using the GeneMapper software (Applied Biosystems). Genetic diversity parameters were estimated using the GDA and Fstat programs. The parameters number of alleles (A), expected heterozygosity (He), observed heterozygosity (Ho), intrapopulation fixation index (f) and allelic richness were estimated for each microsatellite locus. The results showed that all loci used in this study were highly polymorphic, with an average of 16.78 alleles per locus. The EMBRA28 and EMBRA3 loci showed the highest number of alleles (24 and 22). In general, for most markers, the observed heterozygosity had similar estimates when compared to the expected heterozigosity under Hardy-Weinberg Equilibrium. As a result, the fixation index (f) did not differ significantly from zero. Analyses of genetic structure of the clones was performed using the software Structure (version 2.3.4), with K values ranging from 1 to 10, with 10 interactions each. Results indicated presence of three distinct genetic groups (K = 3). However, there was no clear relationship between the populations obtained and the different species of Eucalyptus used in the study. This result can be explained by the clone sample is originated from breeding programs where crosses may have admixed populations, disrupting some genetic structures. Most importantly, the molecular analyses indicate extraordinary genetic diversity within the clonal trials installed in Goiás. This genetic diversity can be exploited for breeding new genetic material adapted to the Cerrado conditions.
publishDate 2014
dc.date.issued.fl_str_mv 2014-09-03
dc.date.accessioned.fl_str_mv 2016-09-21T13:51:21Z
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dc.identifier.citation.fl_str_mv MACIEL, K. J. S. Análise da diversidade e divergência genética em clones de Eucalyptus spp. potencialmente importantes para Goiás. 2014. 64 f. Dissertação (Mestrado em Genética e Melhoramento de Plantas) - Universidade Federal de Goiás, Goiânia, 2014.
dc.identifier.uri.fl_str_mv http://repositorio.bc.ufg.br/tede/handle/tede/6247
identifier_str_mv MACIEL, K. J. S. Análise da diversidade e divergência genética em clones de Eucalyptus spp. potencialmente importantes para Goiás. 2014. 64 f. Dissertação (Mestrado em Genética e Melhoramento de Plantas) - Universidade Federal de Goiás, Goiânia, 2014.
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publisher.none.fl_str_mv Universidade Federal de Goiás
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