Molecular and quantitative genetic analysis of the neotropical tree Jacaranda micrantha Cham.
Autor(a) principal: | |
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Data de Publicação: | 2024 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Cerne (Online) |
Texto Completo: | https://cerne.ufla.br/site/index.php/CERNE/article/view/3353 |
Resumo: | Backgrounds: Urban and peri-urban fragments are vital for biodiversity conservation, requiring genetic assessment of tree species in fragmented forests. The aim of this study was to analyze the genetic variability and diversity for adult individuals of J. micrantha along an urban-rural gradient in the Araucaria Forest. Fifteen individuals were sampled, with five from each remaining forest type. Initially, 10 ISRR primers were tested. Five mother trees were chosen from each site (urban, peri-urban, and rural) with a minimum distance of 100 m. The experimental design was a RCBD with 15 progenies, three provenances, three blocks, and 20 plants per plot, totaling 900 seedlings. Results: The average percentage of polymorphic loci was 93.33%. The urban population showed a greater loss of genetic diversity (H=0.1806). 79% of the genetic diversity was found within populations. The observed gene flow value (Nm) was 1.8790, indicating that there were no random losses of alleles within populations. The fragments did not exhibit significant differences, but there were significant differences among the progenies. The stem diameter (SD) and the height-diameter relationship (H/SD) emerged as the key traits for selecting new individuals due to their higher heritability (< 0.50), accuracy (< 0.70), and relative coefficient of variation (< 7%). Conclusion: The urban fragment is the most affected, but gene flow between fragments prevents the random loss of alleles. The analysis suggests that these fragments form a unique population, despite geographic barriers. Thus, the three fragments can be considered when choosing superior individuals for future progeny tests in genetic improvement programs for the species. |
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Molecular and quantitative genetic analysis of the neotropical tree Jacaranda micrantha Cham. CarobaProgeny testGenetic parametersGenetic conservationBackgrounds: Urban and peri-urban fragments are vital for biodiversity conservation, requiring genetic assessment of tree species in fragmented forests. The aim of this study was to analyze the genetic variability and diversity for adult individuals of J. micrantha along an urban-rural gradient in the Araucaria Forest. Fifteen individuals were sampled, with five from each remaining forest type. Initially, 10 ISRR primers were tested. Five mother trees were chosen from each site (urban, peri-urban, and rural) with a minimum distance of 100 m. The experimental design was a RCBD with 15 progenies, three provenances, three blocks, and 20 plants per plot, totaling 900 seedlings. Results: The average percentage of polymorphic loci was 93.33%. The urban population showed a greater loss of genetic diversity (H=0.1806). 79% of the genetic diversity was found within populations. The observed gene flow value (Nm) was 1.8790, indicating that there were no random losses of alleles within populations. The fragments did not exhibit significant differences, but there were significant differences among the progenies. The stem diameter (SD) and the height-diameter relationship (H/SD) emerged as the key traits for selecting new individuals due to their higher heritability (< 0.50), accuracy (< 0.70), and relative coefficient of variation (< 7%). Conclusion: The urban fragment is the most affected, but gene flow between fragments prevents the random loss of alleles. The analysis suggests that these fragments form a unique population, despite geographic barriers. Thus, the three fragments can be considered when choosing superior individuals for future progeny tests in genetic improvement programs for the species.CERNECERNE2024-04-22info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://cerne.ufla.br/site/index.php/CERNE/article/view/3353CERNE; Vol. 30 No. 1 (2024): ; e-103353CERNE; v. 30 n. 1 (2024): ; e-1033532317-63420104-7760reponame:Cerne (Online)instname:Universidade Federal de Lavras (UFLA)instacron:UFLAenghttps://cerne.ufla.br/site/index.php/CERNE/article/view/3353/1367Copyright (c) 2024 CERNEhttp://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccessSanson, Daniela Homczinski, Isabel Roque, Rafael Henrique Bobrowski, Rogério Peres, Fabiana Schmidt Bandeira Tambarussi, Evandro Vagner2024-04-22T17:20:37Zoai:cerne.ufla.br:article/3353Revistahttps://cerne.ufla.br/site/index.php/CERNEPUBhttps://cerne.ufla.br/site/index.php/CERNE/oaicerne@dcf.ufla.br||cerne@dcf.ufla.br2317-63420104-7760opendoar:2024-05-21T19:54:52.757757Cerne (Online) - Universidade Federal de Lavras (UFLA)true |
dc.title.none.fl_str_mv |
Molecular and quantitative genetic analysis of the neotropical tree Jacaranda micrantha Cham. |
title |
Molecular and quantitative genetic analysis of the neotropical tree Jacaranda micrantha Cham. |
spellingShingle |
Molecular and quantitative genetic analysis of the neotropical tree Jacaranda micrantha Cham. Sanson, Daniela Caroba Progeny test Genetic parameters Genetic conservation |
title_short |
Molecular and quantitative genetic analysis of the neotropical tree Jacaranda micrantha Cham. |
title_full |
Molecular and quantitative genetic analysis of the neotropical tree Jacaranda micrantha Cham. |
title_fullStr |
Molecular and quantitative genetic analysis of the neotropical tree Jacaranda micrantha Cham. |
title_full_unstemmed |
Molecular and quantitative genetic analysis of the neotropical tree Jacaranda micrantha Cham. |
title_sort |
Molecular and quantitative genetic analysis of the neotropical tree Jacaranda micrantha Cham. |
author |
Sanson, Daniela |
author_facet |
Sanson, Daniela Homczinski, Isabel Roque, Rafael Henrique Bobrowski, Rogério Peres, Fabiana Schmidt Bandeira Tambarussi, Evandro Vagner |
author_role |
author |
author2 |
Homczinski, Isabel Roque, Rafael Henrique Bobrowski, Rogério Peres, Fabiana Schmidt Bandeira Tambarussi, Evandro Vagner |
author2_role |
author author author author author |
dc.contributor.author.fl_str_mv |
Sanson, Daniela Homczinski, Isabel Roque, Rafael Henrique Bobrowski, Rogério Peres, Fabiana Schmidt Bandeira Tambarussi, Evandro Vagner |
dc.subject.por.fl_str_mv |
Caroba Progeny test Genetic parameters Genetic conservation |
topic |
Caroba Progeny test Genetic parameters Genetic conservation |
description |
Backgrounds: Urban and peri-urban fragments are vital for biodiversity conservation, requiring genetic assessment of tree species in fragmented forests. The aim of this study was to analyze the genetic variability and diversity for adult individuals of J. micrantha along an urban-rural gradient in the Araucaria Forest. Fifteen individuals were sampled, with five from each remaining forest type. Initially, 10 ISRR primers were tested. Five mother trees were chosen from each site (urban, peri-urban, and rural) with a minimum distance of 100 m. The experimental design was a RCBD with 15 progenies, three provenances, three blocks, and 20 plants per plot, totaling 900 seedlings. Results: The average percentage of polymorphic loci was 93.33%. The urban population showed a greater loss of genetic diversity (H=0.1806). 79% of the genetic diversity was found within populations. The observed gene flow value (Nm) was 1.8790, indicating that there were no random losses of alleles within populations. The fragments did not exhibit significant differences, but there were significant differences among the progenies. The stem diameter (SD) and the height-diameter relationship (H/SD) emerged as the key traits for selecting new individuals due to their higher heritability (< 0.50), accuracy (< 0.70), and relative coefficient of variation (< 7%). Conclusion: The urban fragment is the most affected, but gene flow between fragments prevents the random loss of alleles. The analysis suggests that these fragments form a unique population, despite geographic barriers. Thus, the three fragments can be considered when choosing superior individuals for future progeny tests in genetic improvement programs for the species. |
publishDate |
2024 |
dc.date.none.fl_str_mv |
2024-04-22 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://cerne.ufla.br/site/index.php/CERNE/article/view/3353 |
url |
https://cerne.ufla.br/site/index.php/CERNE/article/view/3353 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
https://cerne.ufla.br/site/index.php/CERNE/article/view/3353/1367 |
dc.rights.driver.fl_str_mv |
Copyright (c) 2024 CERNE http://creativecommons.org/licenses/by/4.0/ info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
Copyright (c) 2024 CERNE http://creativecommons.org/licenses/by/4.0/ |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
CERNE CERNE |
publisher.none.fl_str_mv |
CERNE CERNE |
dc.source.none.fl_str_mv |
CERNE; Vol. 30 No. 1 (2024): ; e-103353 CERNE; v. 30 n. 1 (2024): ; e-103353 2317-6342 0104-7760 reponame:Cerne (Online) instname:Universidade Federal de Lavras (UFLA) instacron:UFLA |
instname_str |
Universidade Federal de Lavras (UFLA) |
instacron_str |
UFLA |
institution |
UFLA |
reponame_str |
Cerne (Online) |
collection |
Cerne (Online) |
repository.name.fl_str_mv |
Cerne (Online) - Universidade Federal de Lavras (UFLA) |
repository.mail.fl_str_mv |
cerne@dcf.ufla.br||cerne@dcf.ufla.br |
_version_ |
1799874944615579648 |