Molecular and quantitative genetic analysis of the neotropical tree Jacaranda micrantha Cham.

Detalhes bibliográficos
Autor(a) principal: Sanson, Daniela
Data de Publicação: 2024
Outros Autores: Homczinski, Isabel, Roque, Rafael Henrique, Bobrowski, Rogério, Peres, Fabiana Schmidt Bandeira, Tambarussi, Evandro Vagner
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Cerne (Online)
Texto Completo: https://cerne.ufla.br/site/index.php/CERNE/article/view/3353
Resumo: Backgrounds: Urban and peri-urban fragments are vital for biodiversity conservation, requiring genetic assessment of tree species in fragmented forests. The aim of this study was to analyze the genetic variability and diversity for adult individuals of J. micrantha along an urban-rural gradient in the Araucaria Forest. Fifteen individuals were sampled, with five from each remaining forest type. Initially, 10 ISRR primers were tested. Five mother trees were chosen from each site (urban, peri-urban, and rural) with a minimum distance of 100 m. The experimental design was a RCBD with 15 progenies, three provenances, three blocks, and 20 plants per plot, totaling 900 seedlings. Results: The average percentage of polymorphic loci was 93.33%. The urban population showed a greater loss of genetic diversity (H=0.1806). 79% of the genetic diversity was found within populations. The observed gene flow value (Nm) was 1.8790, indicating that there were no random losses of alleles within populations. The fragments did not exhibit significant differences, but there were significant differences among the progenies. The stem diameter (SD) and the height-diameter relationship (H/SD) emerged as the key traits for selecting new individuals due to their higher heritability (< 0.50), accuracy (< 0.70), and relative coefficient of variation (< 7%). Conclusion: The urban fragment is the most affected, but gene flow between fragments prevents the random loss of alleles. The analysis suggests that these fragments form a unique population, despite geographic barriers. Thus, the three fragments can be considered when choosing superior individuals for future progeny tests in genetic improvement programs for the species.
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spelling Molecular and quantitative genetic analysis of the neotropical tree Jacaranda micrantha Cham. CarobaProgeny testGenetic parametersGenetic conservationBackgrounds: Urban and peri-urban fragments are vital for biodiversity conservation, requiring genetic assessment of tree species in fragmented forests. The aim of this study was to analyze the genetic variability and diversity for adult individuals of J. micrantha along an urban-rural gradient in the Araucaria Forest. Fifteen individuals were sampled, with five from each remaining forest type. Initially, 10 ISRR primers were tested. Five mother trees were chosen from each site (urban, peri-urban, and rural) with a minimum distance of 100 m. The experimental design was a RCBD with 15 progenies, three provenances, three blocks, and 20 plants per plot, totaling 900 seedlings. Results: The average percentage of polymorphic loci was 93.33%. The urban population showed a greater loss of genetic diversity (H=0.1806). 79% of the genetic diversity was found within populations. The observed gene flow value (Nm) was 1.8790, indicating that there were no random losses of alleles within populations. The fragments did not exhibit significant differences, but there were significant differences among the progenies. The stem diameter (SD) and the height-diameter relationship (H/SD) emerged as the key traits for selecting new individuals due to their higher heritability (< 0.50), accuracy (< 0.70), and relative coefficient of variation (< 7%). Conclusion: The urban fragment is the most affected, but gene flow between fragments prevents the random loss of alleles. The analysis suggests that these fragments form a unique population, despite geographic barriers. Thus, the three fragments can be considered when choosing superior individuals for future progeny tests in genetic improvement programs for the species.CERNECERNE2024-04-22info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://cerne.ufla.br/site/index.php/CERNE/article/view/3353CERNE; Vol. 30 No. 1 (2024): ; e-103353CERNE; v. 30 n. 1 (2024): ; e-1033532317-63420104-7760reponame:Cerne (Online)instname:Universidade Federal de Lavras (UFLA)instacron:UFLAenghttps://cerne.ufla.br/site/index.php/CERNE/article/view/3353/1367Copyright (c) 2024 CERNEhttp://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccessSanson, Daniela Homczinski, Isabel Roque, Rafael Henrique Bobrowski, Rogério Peres, Fabiana Schmidt Bandeira Tambarussi, Evandro Vagner2024-04-22T17:20:37Zoai:cerne.ufla.br:article/3353Revistahttps://cerne.ufla.br/site/index.php/CERNEPUBhttps://cerne.ufla.br/site/index.php/CERNE/oaicerne@dcf.ufla.br||cerne@dcf.ufla.br2317-63420104-7760opendoar:2024-05-21T19:54:52.757757Cerne (Online) - Universidade Federal de Lavras (UFLA)true
dc.title.none.fl_str_mv Molecular and quantitative genetic analysis of the neotropical tree Jacaranda micrantha Cham.
title Molecular and quantitative genetic analysis of the neotropical tree Jacaranda micrantha Cham.
spellingShingle Molecular and quantitative genetic analysis of the neotropical tree Jacaranda micrantha Cham.
Sanson, Daniela
Caroba
Progeny test
Genetic parameters
Genetic conservation
title_short Molecular and quantitative genetic analysis of the neotropical tree Jacaranda micrantha Cham.
title_full Molecular and quantitative genetic analysis of the neotropical tree Jacaranda micrantha Cham.
title_fullStr Molecular and quantitative genetic analysis of the neotropical tree Jacaranda micrantha Cham.
title_full_unstemmed Molecular and quantitative genetic analysis of the neotropical tree Jacaranda micrantha Cham.
title_sort Molecular and quantitative genetic analysis of the neotropical tree Jacaranda micrantha Cham.
author Sanson, Daniela
author_facet Sanson, Daniela
Homczinski, Isabel
Roque, Rafael Henrique
Bobrowski, Rogério
Peres, Fabiana Schmidt Bandeira
Tambarussi, Evandro Vagner
author_role author
author2 Homczinski, Isabel
Roque, Rafael Henrique
Bobrowski, Rogério
Peres, Fabiana Schmidt Bandeira
Tambarussi, Evandro Vagner
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Sanson, Daniela
Homczinski, Isabel
Roque, Rafael Henrique
Bobrowski, Rogério
Peres, Fabiana Schmidt Bandeira
Tambarussi, Evandro Vagner
dc.subject.por.fl_str_mv Caroba
Progeny test
Genetic parameters
Genetic conservation
topic Caroba
Progeny test
Genetic parameters
Genetic conservation
description Backgrounds: Urban and peri-urban fragments are vital for biodiversity conservation, requiring genetic assessment of tree species in fragmented forests. The aim of this study was to analyze the genetic variability and diversity for adult individuals of J. micrantha along an urban-rural gradient in the Araucaria Forest. Fifteen individuals were sampled, with five from each remaining forest type. Initially, 10 ISRR primers were tested. Five mother trees were chosen from each site (urban, peri-urban, and rural) with a minimum distance of 100 m. The experimental design was a RCBD with 15 progenies, three provenances, three blocks, and 20 plants per plot, totaling 900 seedlings. Results: The average percentage of polymorphic loci was 93.33%. The urban population showed a greater loss of genetic diversity (H=0.1806). 79% of the genetic diversity was found within populations. The observed gene flow value (Nm) was 1.8790, indicating that there were no random losses of alleles within populations. The fragments did not exhibit significant differences, but there were significant differences among the progenies. The stem diameter (SD) and the height-diameter relationship (H/SD) emerged as the key traits for selecting new individuals due to their higher heritability (< 0.50), accuracy (< 0.70), and relative coefficient of variation (< 7%). Conclusion: The urban fragment is the most affected, but gene flow between fragments prevents the random loss of alleles. The analysis suggests that these fragments form a unique population, despite geographic barriers. Thus, the three fragments can be considered when choosing superior individuals for future progeny tests in genetic improvement programs for the species.
publishDate 2024
dc.date.none.fl_str_mv 2024-04-22
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://cerne.ufla.br/site/index.php/CERNE/article/view/3353
url https://cerne.ufla.br/site/index.php/CERNE/article/view/3353
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://cerne.ufla.br/site/index.php/CERNE/article/view/3353/1367
dc.rights.driver.fl_str_mv Copyright (c) 2024 CERNE
http://creativecommons.org/licenses/by/4.0/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Copyright (c) 2024 CERNE
http://creativecommons.org/licenses/by/4.0/
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv CERNE
CERNE
publisher.none.fl_str_mv CERNE
CERNE
dc.source.none.fl_str_mv CERNE; Vol. 30 No. 1 (2024): ; e-103353
CERNE; v. 30 n. 1 (2024): ; e-103353
2317-6342
0104-7760
reponame:Cerne (Online)
instname:Universidade Federal de Lavras (UFLA)
instacron:UFLA
instname_str Universidade Federal de Lavras (UFLA)
instacron_str UFLA
institution UFLA
reponame_str Cerne (Online)
collection Cerne (Online)
repository.name.fl_str_mv Cerne (Online) - Universidade Federal de Lavras (UFLA)
repository.mail.fl_str_mv cerne@dcf.ufla.br||cerne@dcf.ufla.br
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