Identifying tropical trees using comparisons with single specimens of species

Detalhes bibliográficos
Autor(a) principal: Hargreaves, Peter
Data de Publicação: 2015
Outros Autores: Berg, Eduardo van den, Carvalho, Douglas Antonio de, Oliveira Filho, Ary Teixeira de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFLA
Texto Completo: http://repositorio.ufla.br/jspui/handle/1/14008
Resumo: A taxonomic database system CARipé with integrated links to plant images was constructed to characterize the 800 forest tree species recorded for the catchments of the Rio Grandein the south of Minas Gerais state in Brazilusing vegetative morphology. After a description was ready, its integrated system Empar, completed in a few seconds an identification attempt using automatic character correlation. Empar proved operationally successful in identification tests of 62 specimens, of as many species, against 554 reference specimens and species from the ESAL Herbarium. Empar employed a similarity coefficient with the option of a weighting based on character frequency and, in tests, the use of this rarity weighting further improved the performance. Three tree groups based on leaf type and phyllotaxy were analyzed separately. From the start, those with compound leaves received more descriptors and the result was little difference in identification performance between the tree groups. Indications were that experts and non-experts performed characterizations for identification purposes almost equally well. The most important result was that successful identifications were obtained using a reference base of just one specimen description per species.
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spelling Identifying tropical trees using comparisons with single specimens of speciesIdentificação de árvores tropicais usando comparações com apenas um espécime por espécieBrazilian Atlantic ForestPlant taxonomySimilarity indexSpecies identificationVegetative morphologyFloresta atlânticaMata AtlânticaIdentificação de espéciesÍndice de similaridadeMorfologia vegetativaTaxonomia vegetalA taxonomic database system CARipé with integrated links to plant images was constructed to characterize the 800 forest tree species recorded for the catchments of the Rio Grandein the south of Minas Gerais state in Brazilusing vegetative morphology. After a description was ready, its integrated system Empar, completed in a few seconds an identification attempt using automatic character correlation. Empar proved operationally successful in identification tests of 62 specimens, of as many species, against 554 reference specimens and species from the ESAL Herbarium. Empar employed a similarity coefficient with the option of a weighting based on character frequency and, in tests, the use of this rarity weighting further improved the performance. Three tree groups based on leaf type and phyllotaxy were analyzed separately. From the start, those with compound leaves received more descriptors and the result was little difference in identification performance between the tree groups. Indications were that experts and non-experts performed characterizations for identification purposes almost equally well. The most important result was that successful identifications were obtained using a reference base of just one specimen description per species.Um banco de dados taxonômico com imagens, CARipé, foi construído para caracterizar, por morfologia vegetativa, as 800 espécies de árvores florestais registradas para a bacia do rio Grande, no sul de Minas Gerais. Depois que uma descrição foi completada, seu sistema integrado, Empar, realizou em alguns segundos uma identificação, usando a correlação automática de caracteres. Em operação, Empar provou ser efetivo em testes de identificação de 62 espécimes, do mesmo número de espécies, em comparações com 554 espécimes e espécies de referência a partir do Herbário ESAL. Empar usou um coeficiente de similaridade com a opção de um peso baseado na freqüência de caracteres. Em testes, o uso desse peso de raridade melhorou a performance. Três grupos caracterizados pelo tipo da folha e filotaxia foram analisados separadamente. No início, o grupo com folhas compostas recebeu mais descritores e o resultado foi pouca diferença entre os grupos na performance de identificações. Houve indicações de que os experts e os leigos realizariam boas caracterizações, para fins de identificação. O resultado mais importante foi que as identificações bem sucedidas foram obtidas usando-se uma base referencial de uma só descrição de espécime por espécie.Universidade Federal de Lavras (UFLA)2015-05-222017-08-01T20:13:18Z2017-08-01T20:13:18Z2017-08-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfapplication/pdfHARGREAVES, P. et al. Identifying tropical trees using comparisons with single specimens of species. CERNE, Lavras, v. 15, n. 1, p. 41-48, jan./mar. 2009.http://repositorio.ufla.br/jspui/handle/1/140082317-63420104-7760reponame:Repositório Institucional da UFLAinstname:Universidade Federal de Lavras (UFLA)instacron:UFLAenghttp://www.cerne.ufla.br/site/index.php/CERNE/article/view/216/186Attribution 4.0 Internationalhttp://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccessHargreaves, PeterBerg, Eduardo van denCarvalho, Douglas Antonio deOliveira Filho, Ary Teixeira de2021-12-08T15:52:19Zoai:localhost:1/14008Repositório InstitucionalPUBhttp://repositorio.ufla.br/oai/requestnivaldo@ufla.br || repositorio.biblioteca@ufla.bropendoar:2021-12-08T15:52:19Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)false
dc.title.none.fl_str_mv Identifying tropical trees using comparisons with single specimens of species
Identificação de árvores tropicais usando comparações com apenas um espécime por espécie
title Identifying tropical trees using comparisons with single specimens of species
spellingShingle Identifying tropical trees using comparisons with single specimens of species
Hargreaves, Peter
Brazilian Atlantic Forest
Plant taxonomy
Similarity index
Species identification
Vegetative morphology
Floresta atlântica
Mata Atlântica
Identificação de espécies
Índice de similaridade
Morfologia vegetativa
Taxonomia vegetal
title_short Identifying tropical trees using comparisons with single specimens of species
title_full Identifying tropical trees using comparisons with single specimens of species
title_fullStr Identifying tropical trees using comparisons with single specimens of species
title_full_unstemmed Identifying tropical trees using comparisons with single specimens of species
title_sort Identifying tropical trees using comparisons with single specimens of species
author Hargreaves, Peter
author_facet Hargreaves, Peter
Berg, Eduardo van den
Carvalho, Douglas Antonio de
Oliveira Filho, Ary Teixeira de
author_role author
author2 Berg, Eduardo van den
Carvalho, Douglas Antonio de
Oliveira Filho, Ary Teixeira de
author2_role author
author
author
dc.contributor.author.fl_str_mv Hargreaves, Peter
Berg, Eduardo van den
Carvalho, Douglas Antonio de
Oliveira Filho, Ary Teixeira de
dc.subject.por.fl_str_mv Brazilian Atlantic Forest
Plant taxonomy
Similarity index
Species identification
Vegetative morphology
Floresta atlântica
Mata Atlântica
Identificação de espécies
Índice de similaridade
Morfologia vegetativa
Taxonomia vegetal
topic Brazilian Atlantic Forest
Plant taxonomy
Similarity index
Species identification
Vegetative morphology
Floresta atlântica
Mata Atlântica
Identificação de espécies
Índice de similaridade
Morfologia vegetativa
Taxonomia vegetal
description A taxonomic database system CARipé with integrated links to plant images was constructed to characterize the 800 forest tree species recorded for the catchments of the Rio Grandein the south of Minas Gerais state in Brazilusing vegetative morphology. After a description was ready, its integrated system Empar, completed in a few seconds an identification attempt using automatic character correlation. Empar proved operationally successful in identification tests of 62 specimens, of as many species, against 554 reference specimens and species from the ESAL Herbarium. Empar employed a similarity coefficient with the option of a weighting based on character frequency and, in tests, the use of this rarity weighting further improved the performance. Three tree groups based on leaf type and phyllotaxy were analyzed separately. From the start, those with compound leaves received more descriptors and the result was little difference in identification performance between the tree groups. Indications were that experts and non-experts performed characterizations for identification purposes almost equally well. The most important result was that successful identifications were obtained using a reference base of just one specimen description per species.
publishDate 2015
dc.date.none.fl_str_mv 2015-05-22
2017-08-01T20:13:18Z
2017-08-01T20:13:18Z
2017-08-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv HARGREAVES, P. et al. Identifying tropical trees using comparisons with single specimens of species. CERNE, Lavras, v. 15, n. 1, p. 41-48, jan./mar. 2009.
http://repositorio.ufla.br/jspui/handle/1/14008
identifier_str_mv HARGREAVES, P. et al. Identifying tropical trees using comparisons with single specimens of species. CERNE, Lavras, v. 15, n. 1, p. 41-48, jan./mar. 2009.
url http://repositorio.ufla.br/jspui/handle/1/14008
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv http://www.cerne.ufla.br/site/index.php/CERNE/article/view/216/186
dc.rights.driver.fl_str_mv Attribution 4.0 International
http://creativecommons.org/licenses/by/4.0/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution 4.0 International
http://creativecommons.org/licenses/by/4.0/
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Lavras (UFLA)
publisher.none.fl_str_mv Universidade Federal de Lavras (UFLA)
dc.source.none.fl_str_mv 2317-6342
0104-7760
reponame:Repositório Institucional da UFLA
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instacron:UFLA
instname_str Universidade Federal de Lavras (UFLA)
instacron_str UFLA
institution UFLA
reponame_str Repositório Institucional da UFLA
collection Repositório Institucional da UFLA
repository.name.fl_str_mv Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)
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