Strategies to improve the efficiency of single-tree plot in eucalyptus breeding

Detalhes bibliográficos
Autor(a) principal: Santos, Heloisa Guimarães
Data de Publicação: 2022
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Repositório Institucional da UFLA
Texto Completo: http://repositorio.ufla.br/jspui/handle/1/49539
Resumo: Single-tree plot (STP) is widely used in eucalyptus breeding programs. It has the advantage of allowing the use of a large number of repetitions, which contributes to improve the experimental precision. Its use, however, has been questioned due to a possible influence of missing plants in the plots, the effect of neighbors and its viability using the lowest number of repetitions. From the above, the present study was carried out with the objective of: verifying the influence of neighbors in experiments in STP; verifying the influence of missing or dominated plants; to evaluate a minimum number of repetitions in these experiments, without reducing the selective accuracy; to identify possible influences of the number of repetitions in the inferences to be obtained in the interaction clones x environments. To answer these questions, three research studies were carried out. The experiments were carried out in four Brazilian states by the company Suzano S.A. Data on the average annual increment (MAI, m3.ha-1.year-1) at three years of age were used. The design was always in randomized complete blocks. In the first study, STP data were used to verify the influence of neighbors, missing and dominated trees. The effect of missing and dominated trees was studied through the correction between the MAI of each clone/plot and the average of a clonal MAI of the eight neighbors. Analyses were performed considering non-adjusted data, data adjusted with missing and data adjusted with missing and dominated trees. In the second study, the effect of the number of repetitions was evaluated from six experiments with 30 repetitions of STP. The effect of the number of repetitions varying from 2 to 29 was simulated. For each number of repetitions, 1000 resampling, without replacement. In each simulation, the effect of the number of repetitions in the estimates of the general mean, the genetic variance and the accuracy was estimated. In the third study, to verify the influence of the number of repetitions on the inferences obtained from the CxA interaction in the STP experiments. The number of repetitions was simulated, in the estimation of genetic and phenotypic parameters, mainly involving the joint analysis of all environments and possible pairs of environments. It was verified that in STP, the performance of the clones is not influenced by the behavior of the neighbors. No increase in experimental accuracy was observed in any type of adjustment. The ranking of clones was not changed, not justifying the correction of missing or dominated trees. In the second study, it was found that the effect in the mean accuracy estimates were very similar in the different numbers of repetitions. However, the standard deviation of the estimates reduced with the increase in the number of repetitions. In the third study, it was found that the inferences about the interactions clones x environments were very similar, regardless of the number of repetitions. Again, the deviations associated with each estimated parameter reduced with the number of repetitions, without, however, causing significant changes in the results of the joint analyses.
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spelling Strategies to improve the efficiency of single-tree plot in eucalyptus breedingEstratégias para melhorar a eficiência de parcelas de uma planta no melhoramento do eucaliptoEucalipto - Melhoramento genéticoBiometriaGenética quantitativaInteração genótipos x ambientesEucalyptus - Genetic improvementBiometryQuantitative geneticsGenotypes x environments interactionMelhoramento VegetalSingle-tree plot (STP) is widely used in eucalyptus breeding programs. It has the advantage of allowing the use of a large number of repetitions, which contributes to improve the experimental precision. Its use, however, has been questioned due to a possible influence of missing plants in the plots, the effect of neighbors and its viability using the lowest number of repetitions. From the above, the present study was carried out with the objective of: verifying the influence of neighbors in experiments in STP; verifying the influence of missing or dominated plants; to evaluate a minimum number of repetitions in these experiments, without reducing the selective accuracy; to identify possible influences of the number of repetitions in the inferences to be obtained in the interaction clones x environments. To answer these questions, three research studies were carried out. The experiments were carried out in four Brazilian states by the company Suzano S.A. Data on the average annual increment (MAI, m3.ha-1.year-1) at three years of age were used. The design was always in randomized complete blocks. In the first study, STP data were used to verify the influence of neighbors, missing and dominated trees. The effect of missing and dominated trees was studied through the correction between the MAI of each clone/plot and the average of a clonal MAI of the eight neighbors. Analyses were performed considering non-adjusted data, data adjusted with missing and data adjusted with missing and dominated trees. In the second study, the effect of the number of repetitions was evaluated from six experiments with 30 repetitions of STP. The effect of the number of repetitions varying from 2 to 29 was simulated. For each number of repetitions, 1000 resampling, without replacement. In each simulation, the effect of the number of repetitions in the estimates of the general mean, the genetic variance and the accuracy was estimated. In the third study, to verify the influence of the number of repetitions on the inferences obtained from the CxA interaction in the STP experiments. The number of repetitions was simulated, in the estimation of genetic and phenotypic parameters, mainly involving the joint analysis of all environments and possible pairs of environments. It was verified that in STP, the performance of the clones is not influenced by the behavior of the neighbors. No increase in experimental accuracy was observed in any type of adjustment. The ranking of clones was not changed, not justifying the correction of missing or dominated trees. In the second study, it was found that the effect in the mean accuracy estimates were very similar in the different numbers of repetitions. However, the standard deviation of the estimates reduced with the increase in the number of repetitions. In the third study, it was found that the inferences about the interactions clones x environments were very similar, regardless of the number of repetitions. Again, the deviations associated with each estimated parameter reduced with the number of repetitions, without, however, causing significant changes in the results of the joint analyses.Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Parcela de uma única planta (single-tree plot - STP) é amplamente utilizada nos programas de melhoramento do eucalipto. Ela tem a vantagem de possibilitar a utilização de grande número de repetições, o que contribui para a melhoria da precisão experimental. A sua utilização, entretanto, tem sido questionada devido a uma possível influência da perda de plantas das parcelas, do efeito dos vizinhos e da viabilidade em se utilizar um número menor de repetições. Do exposto, foi realizado o presente trabalho com o objetivo de: verificar a influência de vizinhos em experimentos em STP; verificar a influência de falhas ou plantas dominadas; avaliar o número mínimo de repetições sem reduzir a acurácia seletiva; identificar possíveis influências do número de repetições nas inferências a serem obtidas na interação clones x ambientes. Para responder essas indagações, foram realizados três trabalhos de pesquisa. Os experimentos foram conduzidos em quatro estados brasileiros pela empresa Suzano S.A. Foram utilizados dados do incremento médio anual (IMA, m3.ha-1.ano-1), aos três anos de idade. O delineamento foi sempre em blocos completos casualizados. No primeiro trabalho, foram utilizados dados de STP para verificar a influência de vizinhos, falhas e árvores dominadas. O efeito de falhas e árvores dominadas foi estudado por meio da correção entre o IMA de cada clone e a média do IMA dos oito clones vizinhos. Foram realizadas análises considerando dados não ajustados, dados ajustados com as falhas e dados ajustados com falhas e árvores dominadas. No segundo trabalho, o efeito do número de repetições foi avaliado a partir de seis experimentos com 30 repetições de STP. Foram simulados o efeito do número de repetições variando de dois a 29. Para cada número de repetições, foram realizadas 1.000 reamostragens, sem reposição. Em cada reamostragem, foram estimados o efeito do número de repetições nas estimativas da média fenotípica, da variância genética e da acurácia. No terceiro trabalho foi verificado a influência do número de repetições nas inferências obtidas a partir da interação CxA nos experimentos em STP. Avaliou-se o efeito do número de repetições, nas estimativas de parâmetros genéticos e fenotípicos, sobretudo envolvendo as análises conjuntas de todos os ambientes e dos possíveis pares de ambientes. Verificou-se que no STP, os desempenhos dos clones não são influenciados pelo comportamento dos vizinhos. Não se observou aumento da acurácia experimental em nenhum tipo de ajuste. O ranqueamento dos clones não foi alterado, não justificando realizar correção de falhas ou árvores dominadas. Constatou-se, no segundo trabalho, que o efeito na média das estimativas da acurácia foi muito semelhante nos diferentes números de repetições. Contudo, o desvio padrão das estimativas reduziu com o aumento do número de repetições. No terceiro trabalho, constatou-se que, as inferências a respeito das interações clones x ambientes foram bem semelhantes, independentemente do número de repetições. Os desvios associados às estimativas dos parâmetros estimados reduziram com o número de repetições, sem, contudo, provocar alterações expressivas nos resultados das análises conjuntas.Universidade Federal de LavrasPrograma de Pós-Graduação em Genética e Melhoramento de PlantasUFLAbrasilDepartamento de BiologiaGonçalves, Flávia Maria AvelarRamalho, Magno Antonio PattoGonçalves, Flávia Maria AvelarRamalho, Magno Antonio PattoMarçal, Tiago de SouzaLima, José LuísNunes, José Airton RodriguesSantos, Heloisa Guimarães2022-03-21T20:40:01Z2022-03-21T20:40:01Z2022-03-212022-01-17info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfSANTOS, H. G. Strategies to improve the efficiency of single-tree plot in eucalyptus breeding. 2022. 65 p. Tese (Doutorado em Genética e Melhoramento de Plantas) – Universidade Federal de Lavras, Lavras, 2022.http://repositorio.ufla.br/jspui/handle/1/49539porinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFLAinstname:Universidade Federal de Lavras (UFLA)instacron:UFLA2023-04-28T16:44:51Zoai:localhost:1/49539Repositório InstitucionalPUBhttp://repositorio.ufla.br/oai/requestnivaldo@ufla.br || repositorio.biblioteca@ufla.bropendoar:2023-04-28T16:44:51Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)false
dc.title.none.fl_str_mv Strategies to improve the efficiency of single-tree plot in eucalyptus breeding
Estratégias para melhorar a eficiência de parcelas de uma planta no melhoramento do eucalipto
title Strategies to improve the efficiency of single-tree plot in eucalyptus breeding
spellingShingle Strategies to improve the efficiency of single-tree plot in eucalyptus breeding
Santos, Heloisa Guimarães
Eucalipto - Melhoramento genético
Biometria
Genética quantitativa
Interação genótipos x ambientes
Eucalyptus - Genetic improvement
Biometry
Quantitative genetics
Genotypes x environments interaction
Melhoramento Vegetal
title_short Strategies to improve the efficiency of single-tree plot in eucalyptus breeding
title_full Strategies to improve the efficiency of single-tree plot in eucalyptus breeding
title_fullStr Strategies to improve the efficiency of single-tree plot in eucalyptus breeding
title_full_unstemmed Strategies to improve the efficiency of single-tree plot in eucalyptus breeding
title_sort Strategies to improve the efficiency of single-tree plot in eucalyptus breeding
author Santos, Heloisa Guimarães
author_facet Santos, Heloisa Guimarães
author_role author
dc.contributor.none.fl_str_mv Gonçalves, Flávia Maria Avelar
Ramalho, Magno Antonio Patto
Gonçalves, Flávia Maria Avelar
Ramalho, Magno Antonio Patto
Marçal, Tiago de Souza
Lima, José Luís
Nunes, José Airton Rodrigues
dc.contributor.author.fl_str_mv Santos, Heloisa Guimarães
dc.subject.por.fl_str_mv Eucalipto - Melhoramento genético
Biometria
Genética quantitativa
Interação genótipos x ambientes
Eucalyptus - Genetic improvement
Biometry
Quantitative genetics
Genotypes x environments interaction
Melhoramento Vegetal
topic Eucalipto - Melhoramento genético
Biometria
Genética quantitativa
Interação genótipos x ambientes
Eucalyptus - Genetic improvement
Biometry
Quantitative genetics
Genotypes x environments interaction
Melhoramento Vegetal
description Single-tree plot (STP) is widely used in eucalyptus breeding programs. It has the advantage of allowing the use of a large number of repetitions, which contributes to improve the experimental precision. Its use, however, has been questioned due to a possible influence of missing plants in the plots, the effect of neighbors and its viability using the lowest number of repetitions. From the above, the present study was carried out with the objective of: verifying the influence of neighbors in experiments in STP; verifying the influence of missing or dominated plants; to evaluate a minimum number of repetitions in these experiments, without reducing the selective accuracy; to identify possible influences of the number of repetitions in the inferences to be obtained in the interaction clones x environments. To answer these questions, three research studies were carried out. The experiments were carried out in four Brazilian states by the company Suzano S.A. Data on the average annual increment (MAI, m3.ha-1.year-1) at three years of age were used. The design was always in randomized complete blocks. In the first study, STP data were used to verify the influence of neighbors, missing and dominated trees. The effect of missing and dominated trees was studied through the correction between the MAI of each clone/plot and the average of a clonal MAI of the eight neighbors. Analyses were performed considering non-adjusted data, data adjusted with missing and data adjusted with missing and dominated trees. In the second study, the effect of the number of repetitions was evaluated from six experiments with 30 repetitions of STP. The effect of the number of repetitions varying from 2 to 29 was simulated. For each number of repetitions, 1000 resampling, without replacement. In each simulation, the effect of the number of repetitions in the estimates of the general mean, the genetic variance and the accuracy was estimated. In the third study, to verify the influence of the number of repetitions on the inferences obtained from the CxA interaction in the STP experiments. The number of repetitions was simulated, in the estimation of genetic and phenotypic parameters, mainly involving the joint analysis of all environments and possible pairs of environments. It was verified that in STP, the performance of the clones is not influenced by the behavior of the neighbors. No increase in experimental accuracy was observed in any type of adjustment. The ranking of clones was not changed, not justifying the correction of missing or dominated trees. In the second study, it was found that the effect in the mean accuracy estimates were very similar in the different numbers of repetitions. However, the standard deviation of the estimates reduced with the increase in the number of repetitions. In the third study, it was found that the inferences about the interactions clones x environments were very similar, regardless of the number of repetitions. Again, the deviations associated with each estimated parameter reduced with the number of repetitions, without, however, causing significant changes in the results of the joint analyses.
publishDate 2022
dc.date.none.fl_str_mv 2022-03-21T20:40:01Z
2022-03-21T20:40:01Z
2022-03-21
2022-01-17
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv SANTOS, H. G. Strategies to improve the efficiency of single-tree plot in eucalyptus breeding. 2022. 65 p. Tese (Doutorado em Genética e Melhoramento de Plantas) – Universidade Federal de Lavras, Lavras, 2022.
http://repositorio.ufla.br/jspui/handle/1/49539
identifier_str_mv SANTOS, H. G. Strategies to improve the efficiency of single-tree plot in eucalyptus breeding. 2022. 65 p. Tese (Doutorado em Genética e Melhoramento de Plantas) – Universidade Federal de Lavras, Lavras, 2022.
url http://repositorio.ufla.br/jspui/handle/1/49539
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language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Lavras
Programa de Pós-Graduação em Genética e Melhoramento de Plantas
UFLA
brasil
Departamento de Biologia
publisher.none.fl_str_mv Universidade Federal de Lavras
Programa de Pós-Graduação em Genética e Melhoramento de Plantas
UFLA
brasil
Departamento de Biologia
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFLA
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instacron:UFLA
instname_str Universidade Federal de Lavras (UFLA)
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institution UFLA
reponame_str Repositório Institucional da UFLA
collection Repositório Institucional da UFLA
repository.name.fl_str_mv Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)
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