Genetic diversity analysis of two Eucalyptus species using ISSR markers

Detalhes bibliográficos
Autor(a) principal: Teixeira, Giovanna Carla
Data de Publicação: 2020
Outros Autores: Konzen, Enéas Ricardo, Faria, Júlio Cézar Tannure, Gonçalves, Douglas Santos, Carvalho, Dulcinéia de, Brondani, Gilvano Ebling
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFLA
Texto Completo: http://repositorio.ufla.br/jspui/handle/1/42486
Resumo: Here, we deployed a genetic diversity analysis using ISSR markers in two Eucalyptus species, as a fundamental step toward breeding strategies. The selected species were Eucalyptus urophylla and Eucalyptus microcorys, both with economic potential in forestry. The studied individuals belong to a species and the provenance test that was installed in 1974 and until now remains exempt from silvicultural treatments. Nine universal ISSR primers were used in the analyses. Intra and interspecific variation through the polymorphism percentage, polymorphism information content (PIC) and Euclidean distances among individuals were computed. The Euclidean distance among the individuals was used to perform a principal coordinate analysis (PCoA), as well as the permutation analysis of multivariate dispersion (PermDisp), followed by the Tukey’s test. A high percentage of polymorphic bands were detected, with 57.14% for Eucalyptus microcorys and 80.95% for Eucalyptus urophylla. PIC values were higher than 0.5 for four primers (UBC827, UBC835, UBC841, and UBC842). The genetic variability was significantly higher within the Eucalyptus urophylla population than in Eucalyptus microcorys, which may be associated with the greater ability of Eucalyptus urophylla to naturally hybridize, therefore, enabling the introduction of new alleles to their populations.
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spelling Genetic diversity analysis of two Eucalyptus species using ISSR markersDiversidade genética de duas espécies de Eucalyptus usando marcadores ISSRGenetic breedingGenetic reserveEucalyptus urophyllaEucalyptus microcorysEucalipto - Melhoramento genéticoEucalipto - Reserva genéticaSequências simples repetidasMicrossatélitesHere, we deployed a genetic diversity analysis using ISSR markers in two Eucalyptus species, as a fundamental step toward breeding strategies. The selected species were Eucalyptus urophylla and Eucalyptus microcorys, both with economic potential in forestry. The studied individuals belong to a species and the provenance test that was installed in 1974 and until now remains exempt from silvicultural treatments. Nine universal ISSR primers were used in the analyses. Intra and interspecific variation through the polymorphism percentage, polymorphism information content (PIC) and Euclidean distances among individuals were computed. The Euclidean distance among the individuals was used to perform a principal coordinate analysis (PCoA), as well as the permutation analysis of multivariate dispersion (PermDisp), followed by the Tukey’s test. A high percentage of polymorphic bands were detected, with 57.14% for Eucalyptus microcorys and 80.95% for Eucalyptus urophylla. PIC values were higher than 0.5 for four primers (UBC827, UBC835, UBC841, and UBC842). The genetic variability was significantly higher within the Eucalyptus urophylla population than in Eucalyptus microcorys, which may be associated with the greater ability of Eucalyptus urophylla to naturally hybridize, therefore, enabling the introduction of new alleles to their populations.Visando fornecer informações que sirvam de base para estudos de melhoramento genético de Eucalyptus foi realizada a análise da diversidade genética usando marcadores ISSR. As espécies estudadas foram Eucalyptus urophylla e Eucalyptus microcorys, ambas com potencial econômico florestal. Os indivíduos estudados pertencem a um teste de espécies e procedências instalado no ano de 1974 e permanecem isentos de tratos silviculturais. Para as análises foram utilizados nove primers ISSR universais. A partir dos resultados avaliou-se a existência de variação intra e interespecífica por meio da porcentagem de polimorfismo, conteúdo de informação polimórfica (PIC) e distância Euclidiana entre indivíduos. A fim de analisar a distância Euclidiana entre os indivíduos foram feitas a análise de coordenadas principais (PCoA) e análise permutacional de dispersão multivariada (PermDisp) seguida pelo teste de Tukey. Observou-se elevada porcentagem de polimorfismo (57,14% para Eucalyptus microcorys e 80,95% para Eucalyptus urophylla). Considerando todos os grupos avaliados, os valores de PIC foram superiores a 0,5 para quatro primers (UBC827, UBC835, UBC841). A variabilidade interna foi significativamente maior na população de Eucalyptus urophylla em relação à Eucalyptus microcorys, o que pode estar associado à maior capacidade do Eucalyptus urophylla em hibridizar naturalmente.Universidade Federal de Santa Maria2020-08-19T17:28:12Z2020-08-19T17:28:12Z2020-05info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfTEIXEIRA, G. C. et al. Genetic diversity analysis of two Eucalyptus species using ISSR markers. Ciência Florestal, Santa Maria, v. 30, n. 1, p. 270-278, jan./mar. 2020. DOI: https://doi.org/10.5902/1980509832804.http://repositorio.ufla.br/jspui/handle/1/42486Ciência Florestalreponame:Repositório Institucional da UFLAinstname:Universidade Federal de Lavras (UFLA)instacron:UFLAhttp://creativecommons.org/licenses/by-nc/4.0/info:eu-repo/semantics/openAccessTeixeira, Giovanna CarlaKonzen, Enéas RicardoFaria, Júlio Cézar TannureGonçalves, Douglas SantosCarvalho, Dulcinéia deBrondani, Gilvano Eblingeng2020-08-19T17:28:45Zoai:localhost:1/42486Repositório InstitucionalPUBhttp://repositorio.ufla.br/oai/requestnivaldo@ufla.br || repositorio.biblioteca@ufla.bropendoar:2020-08-19T17:28:45Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)false
dc.title.none.fl_str_mv Genetic diversity analysis of two Eucalyptus species using ISSR markers
Diversidade genética de duas espécies de Eucalyptus usando marcadores ISSR
title Genetic diversity analysis of two Eucalyptus species using ISSR markers
spellingShingle Genetic diversity analysis of two Eucalyptus species using ISSR markers
Teixeira, Giovanna Carla
Genetic breeding
Genetic reserve
Eucalyptus urophylla
Eucalyptus microcorys
Eucalipto - Melhoramento genético
Eucalipto - Reserva genética
Sequências simples repetidas
Microssatélites
title_short Genetic diversity analysis of two Eucalyptus species using ISSR markers
title_full Genetic diversity analysis of two Eucalyptus species using ISSR markers
title_fullStr Genetic diversity analysis of two Eucalyptus species using ISSR markers
title_full_unstemmed Genetic diversity analysis of two Eucalyptus species using ISSR markers
title_sort Genetic diversity analysis of two Eucalyptus species using ISSR markers
author Teixeira, Giovanna Carla
author_facet Teixeira, Giovanna Carla
Konzen, Enéas Ricardo
Faria, Júlio Cézar Tannure
Gonçalves, Douglas Santos
Carvalho, Dulcinéia de
Brondani, Gilvano Ebling
author_role author
author2 Konzen, Enéas Ricardo
Faria, Júlio Cézar Tannure
Gonçalves, Douglas Santos
Carvalho, Dulcinéia de
Brondani, Gilvano Ebling
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Teixeira, Giovanna Carla
Konzen, Enéas Ricardo
Faria, Júlio Cézar Tannure
Gonçalves, Douglas Santos
Carvalho, Dulcinéia de
Brondani, Gilvano Ebling
dc.subject.por.fl_str_mv Genetic breeding
Genetic reserve
Eucalyptus urophylla
Eucalyptus microcorys
Eucalipto - Melhoramento genético
Eucalipto - Reserva genética
Sequências simples repetidas
Microssatélites
topic Genetic breeding
Genetic reserve
Eucalyptus urophylla
Eucalyptus microcorys
Eucalipto - Melhoramento genético
Eucalipto - Reserva genética
Sequências simples repetidas
Microssatélites
description Here, we deployed a genetic diversity analysis using ISSR markers in two Eucalyptus species, as a fundamental step toward breeding strategies. The selected species were Eucalyptus urophylla and Eucalyptus microcorys, both with economic potential in forestry. The studied individuals belong to a species and the provenance test that was installed in 1974 and until now remains exempt from silvicultural treatments. Nine universal ISSR primers were used in the analyses. Intra and interspecific variation through the polymorphism percentage, polymorphism information content (PIC) and Euclidean distances among individuals were computed. The Euclidean distance among the individuals was used to perform a principal coordinate analysis (PCoA), as well as the permutation analysis of multivariate dispersion (PermDisp), followed by the Tukey’s test. A high percentage of polymorphic bands were detected, with 57.14% for Eucalyptus microcorys and 80.95% for Eucalyptus urophylla. PIC values were higher than 0.5 for four primers (UBC827, UBC835, UBC841, and UBC842). The genetic variability was significantly higher within the Eucalyptus urophylla population than in Eucalyptus microcorys, which may be associated with the greater ability of Eucalyptus urophylla to naturally hybridize, therefore, enabling the introduction of new alleles to their populations.
publishDate 2020
dc.date.none.fl_str_mv 2020-08-19T17:28:12Z
2020-08-19T17:28:12Z
2020-05
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv TEIXEIRA, G. C. et al. Genetic diversity analysis of two Eucalyptus species using ISSR markers. Ciência Florestal, Santa Maria, v. 30, n. 1, p. 270-278, jan./mar. 2020. DOI: https://doi.org/10.5902/1980509832804.
http://repositorio.ufla.br/jspui/handle/1/42486
identifier_str_mv TEIXEIRA, G. C. et al. Genetic diversity analysis of two Eucalyptus species using ISSR markers. Ciência Florestal, Santa Maria, v. 30, n. 1, p. 270-278, jan./mar. 2020. DOI: https://doi.org/10.5902/1980509832804.
url http://repositorio.ufla.br/jspui/handle/1/42486
dc.language.iso.fl_str_mv eng
language eng
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info:eu-repo/semantics/openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc/4.0/
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Santa Maria
publisher.none.fl_str_mv Universidade Federal de Santa Maria
dc.source.none.fl_str_mv Ciência Florestal
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repository.name.fl_str_mv Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)
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