Comprehensive analysis of the secreted proteome of adult Necator americanus hookworms

Detalhes bibliográficos
Autor(a) principal: Logan, Jayden
Data de Publicação: 2020
Outros Autores: Pearson, Mark S., Manda, Srikanth S., Choi, Young-Jun, Field, Matthew, Eichenberger, Ramon M., Mulvenna, Jason, Nagaraj, Shivashankar H., Fujiwara, Ricardo T., Gazzinelli-Guimaraes, Pedro, Bueno, Lilian, Mati, Vitor, Bethony, Jeffrey M., Mitreva, Makedonka, Sotillo, Javier, Loukas, Alex
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFLA
Texto Completo: http://repositorio.ufla.br/jspui/handle/1/46367
Resumo: The human hookworm Necator americanus infects more than 400 million people worldwide, contributing substantially to the poverty in these regions. Adult stage N. americanus live in the small intestine of the human host where they inject excretory/secretory (ES) products into the mucosa. ES products have been characterized at the proteome level for a number of animal hookworm species, but until now, the difficulty in obtaining sufficient live N. americanus has been an obstacle in characterizing the secretome of this important human pathogen. Herein we describe the ES proteome of N. americanus and utilize this information along with RNA Seq data to conduct the first proteogenomic analysis of a parasitic helminth, significantly improving the available genome and thereby generating a robust description of the parasite secretome. The genome annotation resulted in a revised prediction of 3,425 fewer genes than initially reported, accompanied by a significant increase in the number of exons and introns, total gene length and the percentage of the genome covered by genes. Almost 200 ES proteins were identified by LC-MS/MS with SCP/TAPS proteins, ‘hypothetical’ proteins and proteases among the most abundant families. These proteins were compared to commonly used model species of human parasitic infections, including Ancylostoma caninum, Nippostrongylus brasiliensis and Heligmosomoides polygyrus. SCP/TAPS proteins are immunogenic in nematode infections, so we expressed four of those identified in this study in recombinant form and showed that they are all recognized to varying degrees by serum antibodies from hookworm-infected subjects from a disease-endemic area of Brazil. Our findings provide valuable information on important families of proteins with both known and unknown functions that could be instrumental in host-parasite interactions, including protein families that might be key for parasite survival in the onslaught of robust immune responses, as well as vaccine and diagnostic targets.
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spelling Comprehensive analysis of the secreted proteome of adult Necator americanus hookwormsNecator americanusProtein domainsGenome annotationHookwormsHelminth infectionsGene predictionParasitic diseasesDomínios de proteínaAnotação de genomaAncilostomídeosInfecções por helmintosPredição de genesDoenças parasitáriasThe human hookworm Necator americanus infects more than 400 million people worldwide, contributing substantially to the poverty in these regions. Adult stage N. americanus live in the small intestine of the human host where they inject excretory/secretory (ES) products into the mucosa. ES products have been characterized at the proteome level for a number of animal hookworm species, but until now, the difficulty in obtaining sufficient live N. americanus has been an obstacle in characterizing the secretome of this important human pathogen. Herein we describe the ES proteome of N. americanus and utilize this information along with RNA Seq data to conduct the first proteogenomic analysis of a parasitic helminth, significantly improving the available genome and thereby generating a robust description of the parasite secretome. The genome annotation resulted in a revised prediction of 3,425 fewer genes than initially reported, accompanied by a significant increase in the number of exons and introns, total gene length and the percentage of the genome covered by genes. Almost 200 ES proteins were identified by LC-MS/MS with SCP/TAPS proteins, ‘hypothetical’ proteins and proteases among the most abundant families. These proteins were compared to commonly used model species of human parasitic infections, including Ancylostoma caninum, Nippostrongylus brasiliensis and Heligmosomoides polygyrus. SCP/TAPS proteins are immunogenic in nematode infections, so we expressed four of those identified in this study in recombinant form and showed that they are all recognized to varying degrees by serum antibodies from hookworm-infected subjects from a disease-endemic area of Brazil. Our findings provide valuable information on important families of proteins with both known and unknown functions that could be instrumental in host-parasite interactions, including protein families that might be key for parasite survival in the onslaught of robust immune responses, as well as vaccine and diagnostic targets.PLoS2021-05-25T17:21:14Z2021-05-25T17:21:14Z2020info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfLOGAN, J. et al. Comprehensive analysis of the secreted proteome of adult Necator americanus hookworms. PLOS Neglected Tropical Diseases, [S. l.], v. 14, n. 5, e0008237, 2020. DOI: 10.1371/journal.pntd.0008237.http://repositorio.ufla.br/jspui/handle/1/46367PLOS Neglected Tropical Diseasesreponame:Repositório Institucional da UFLAinstname:Universidade Federal de Lavras (UFLA)instacron:UFLAAttribution 4.0 Internationalhttp://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccessLogan, JaydenPearson, Mark S.Manda, Srikanth S.Choi, Young-JunField, MatthewEichenberger, Ramon M.Mulvenna, JasonNagaraj, Shivashankar H.Fujiwara, Ricardo T.Gazzinelli-Guimaraes, PedroBueno, LilianMati, VitorBethony, Jeffrey M.Mitreva, MakedonkaSotillo, JavierLoukas, Alexeng2021-05-25T17:21:14Zoai:localhost:1/46367Repositório InstitucionalPUBhttp://repositorio.ufla.br/oai/requestnivaldo@ufla.br || repositorio.biblioteca@ufla.bropendoar:2021-05-25T17:21:14Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)false
dc.title.none.fl_str_mv Comprehensive analysis of the secreted proteome of adult Necator americanus hookworms
title Comprehensive analysis of the secreted proteome of adult Necator americanus hookworms
spellingShingle Comprehensive analysis of the secreted proteome of adult Necator americanus hookworms
Logan, Jayden
Necator americanus
Protein domains
Genome annotation
Hookworms
Helminth infections
Gene prediction
Parasitic diseases
Domínios de proteína
Anotação de genoma
Ancilostomídeos
Infecções por helmintos
Predição de genes
Doenças parasitárias
title_short Comprehensive analysis of the secreted proteome of adult Necator americanus hookworms
title_full Comprehensive analysis of the secreted proteome of adult Necator americanus hookworms
title_fullStr Comprehensive analysis of the secreted proteome of adult Necator americanus hookworms
title_full_unstemmed Comprehensive analysis of the secreted proteome of adult Necator americanus hookworms
title_sort Comprehensive analysis of the secreted proteome of adult Necator americanus hookworms
author Logan, Jayden
author_facet Logan, Jayden
Pearson, Mark S.
Manda, Srikanth S.
Choi, Young-Jun
Field, Matthew
Eichenberger, Ramon M.
Mulvenna, Jason
Nagaraj, Shivashankar H.
Fujiwara, Ricardo T.
Gazzinelli-Guimaraes, Pedro
Bueno, Lilian
Mati, Vitor
Bethony, Jeffrey M.
Mitreva, Makedonka
Sotillo, Javier
Loukas, Alex
author_role author
author2 Pearson, Mark S.
Manda, Srikanth S.
Choi, Young-Jun
Field, Matthew
Eichenberger, Ramon M.
Mulvenna, Jason
Nagaraj, Shivashankar H.
Fujiwara, Ricardo T.
Gazzinelli-Guimaraes, Pedro
Bueno, Lilian
Mati, Vitor
Bethony, Jeffrey M.
Mitreva, Makedonka
Sotillo, Javier
Loukas, Alex
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Logan, Jayden
Pearson, Mark S.
Manda, Srikanth S.
Choi, Young-Jun
Field, Matthew
Eichenberger, Ramon M.
Mulvenna, Jason
Nagaraj, Shivashankar H.
Fujiwara, Ricardo T.
Gazzinelli-Guimaraes, Pedro
Bueno, Lilian
Mati, Vitor
Bethony, Jeffrey M.
Mitreva, Makedonka
Sotillo, Javier
Loukas, Alex
dc.subject.por.fl_str_mv Necator americanus
Protein domains
Genome annotation
Hookworms
Helminth infections
Gene prediction
Parasitic diseases
Domínios de proteína
Anotação de genoma
Ancilostomídeos
Infecções por helmintos
Predição de genes
Doenças parasitárias
topic Necator americanus
Protein domains
Genome annotation
Hookworms
Helminth infections
Gene prediction
Parasitic diseases
Domínios de proteína
Anotação de genoma
Ancilostomídeos
Infecções por helmintos
Predição de genes
Doenças parasitárias
description The human hookworm Necator americanus infects more than 400 million people worldwide, contributing substantially to the poverty in these regions. Adult stage N. americanus live in the small intestine of the human host where they inject excretory/secretory (ES) products into the mucosa. ES products have been characterized at the proteome level for a number of animal hookworm species, but until now, the difficulty in obtaining sufficient live N. americanus has been an obstacle in characterizing the secretome of this important human pathogen. Herein we describe the ES proteome of N. americanus and utilize this information along with RNA Seq data to conduct the first proteogenomic analysis of a parasitic helminth, significantly improving the available genome and thereby generating a robust description of the parasite secretome. The genome annotation resulted in a revised prediction of 3,425 fewer genes than initially reported, accompanied by a significant increase in the number of exons and introns, total gene length and the percentage of the genome covered by genes. Almost 200 ES proteins were identified by LC-MS/MS with SCP/TAPS proteins, ‘hypothetical’ proteins and proteases among the most abundant families. These proteins were compared to commonly used model species of human parasitic infections, including Ancylostoma caninum, Nippostrongylus brasiliensis and Heligmosomoides polygyrus. SCP/TAPS proteins are immunogenic in nematode infections, so we expressed four of those identified in this study in recombinant form and showed that they are all recognized to varying degrees by serum antibodies from hookworm-infected subjects from a disease-endemic area of Brazil. Our findings provide valuable information on important families of proteins with both known and unknown functions that could be instrumental in host-parasite interactions, including protein families that might be key for parasite survival in the onslaught of robust immune responses, as well as vaccine and diagnostic targets.
publishDate 2020
dc.date.none.fl_str_mv 2020
2021-05-25T17:21:14Z
2021-05-25T17:21:14Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv LOGAN, J. et al. Comprehensive analysis of the secreted proteome of adult Necator americanus hookworms. PLOS Neglected Tropical Diseases, [S. l.], v. 14, n. 5, e0008237, 2020. DOI: 10.1371/journal.pntd.0008237.
http://repositorio.ufla.br/jspui/handle/1/46367
identifier_str_mv LOGAN, J. et al. Comprehensive analysis of the secreted proteome of adult Necator americanus hookworms. PLOS Neglected Tropical Diseases, [S. l.], v. 14, n. 5, e0008237, 2020. DOI: 10.1371/journal.pntd.0008237.
url http://repositorio.ufla.br/jspui/handle/1/46367
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv Attribution 4.0 International
http://creativecommons.org/licenses/by/4.0/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution 4.0 International
http://creativecommons.org/licenses/by/4.0/
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv PLoS
publisher.none.fl_str_mv PLoS
dc.source.none.fl_str_mv PLOS Neglected Tropical Diseases
reponame:Repositório Institucional da UFLA
instname:Universidade Federal de Lavras (UFLA)
instacron:UFLA
instname_str Universidade Federal de Lavras (UFLA)
instacron_str UFLA
institution UFLA
reponame_str Repositório Institucional da UFLA
collection Repositório Institucional da UFLA
repository.name.fl_str_mv Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)
repository.mail.fl_str_mv nivaldo@ufla.br || repositorio.biblioteca@ufla.br
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