Conventional and synchrotron-based x-ray studies for characterization of soil symbionts

Detalhes bibliográficos
Autor(a) principal: Bamberg, Soraya Marx
Data de Publicação: 2019
Tipo de documento: Tese
Idioma: eng
Título da fonte: Repositório Institucional da UFLA
Texto Completo: http://repositorio.ufla.br/jspui/handle/1/33456
Resumo: Nitrogen-fixing bacteria (NFB) in symbiosis with legumes form structures called nodules that increase the N fixation efficiency. Arbuscular mycorrhizal fungi (AMF) are known by their efficiency in obtain P available to plants. The triple symbiosis between legumes, FMAs, and NFB is denominated tripartite. In the tripartite symbiosys the nodule formation protects the NFB, the AMF provide P to the system, and the legumes provide photoassimilates for both symbionts. In view of the nutritional benefits of these relationships the thesis aims are to evaluate the nutritional status of the tripartite association microorganisms and to identify the possible AMF mechanisms in the absorption and compartmentalization of Se in their spores, as a possible strategy to the plant protection. In the first study lima-bean (Phaseolus lunatus L. Walp) was cultivated in pots, to which were added AMF isolates (Glomus macrocarpum and Acaulospora colombiana) and NFB (Bradyrhizobium japonicum), also control plants were added. The quantification of the mineral elements in the tripartite symbiosis components was performed using X-ray dispersive energy spectroscopy (EDX), and scanning electron microscopy (SEM) was used to identify structures. The second study was conducted with Brachiaria decumbens (Urochloa decumbens) cultivated for 30 days in pot, using AMF isolates (Acaulospora morrowiae, Dentiscutata heterogama and Rhizophagus clarus), uninoculated control plants, and five doses of sodium selenate (0.2 , 4, 6 and 8 mg kg -1Se). A parallel experiment was conducted on agar medium using Petri dishes with the same Se doses from the pot experiment, which allowed seven spores of Dentiscutata heterogama fungi to grow for 15 days at 37 °C. Mycorrhizal colonization and the Se in shoot plant accumulation were evaluated, as well as the quantification and visualization of Se in the AMF structures by microanalyses of synchrotron X-ray fluorescence (S-XRF). EDX analysis detected 13 elements, showing the occurrence in all tissues, roots, epidermis and nodules. The distribution of the elements in the bean was related to its symbiosis function. The fungi reached high colonization rates in the brachiaria plants. The Se accumulation in shoot plants indicated a possible protective effect provided by R. clarus in U. decumbens to avoid Se accumulation. The S-XRF analysis identified Se in a vesicle of R. clarus within a root fragment, and also, Se presence in D. heterogama spores germinated in Petri dish. In view of the thesis studies, the SEM-EDX and S-XRF techniques were efficient for the soil symbionts characterization allowing a scientific contribution of applicability of these microorganisms.
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spelling Conventional and synchrotron-based x-ray studies for characterization of soil symbiontsEstudos convencionais e baseados em raio-x síncrotron para caracterização de simbiontes mutualistas do soloX-ray fluorescence (XRF)Biological fixationArbuscular mycorrhizaeFluorescência de raios-XFixação biológicaMicorrizas arbuscularesMicrobiologia e Bioquímica do SoloNitrogen-fixing bacteria (NFB) in symbiosis with legumes form structures called nodules that increase the N fixation efficiency. Arbuscular mycorrhizal fungi (AMF) are known by their efficiency in obtain P available to plants. The triple symbiosis between legumes, FMAs, and NFB is denominated tripartite. In the tripartite symbiosys the nodule formation protects the NFB, the AMF provide P to the system, and the legumes provide photoassimilates for both symbionts. In view of the nutritional benefits of these relationships the thesis aims are to evaluate the nutritional status of the tripartite association microorganisms and to identify the possible AMF mechanisms in the absorption and compartmentalization of Se in their spores, as a possible strategy to the plant protection. In the first study lima-bean (Phaseolus lunatus L. Walp) was cultivated in pots, to which were added AMF isolates (Glomus macrocarpum and Acaulospora colombiana) and NFB (Bradyrhizobium japonicum), also control plants were added. The quantification of the mineral elements in the tripartite symbiosis components was performed using X-ray dispersive energy spectroscopy (EDX), and scanning electron microscopy (SEM) was used to identify structures. The second study was conducted with Brachiaria decumbens (Urochloa decumbens) cultivated for 30 days in pot, using AMF isolates (Acaulospora morrowiae, Dentiscutata heterogama and Rhizophagus clarus), uninoculated control plants, and five doses of sodium selenate (0.2 , 4, 6 and 8 mg kg -1Se). A parallel experiment was conducted on agar medium using Petri dishes with the same Se doses from the pot experiment, which allowed seven spores of Dentiscutata heterogama fungi to grow for 15 days at 37 °C. Mycorrhizal colonization and the Se in shoot plant accumulation were evaluated, as well as the quantification and visualization of Se in the AMF structures by microanalyses of synchrotron X-ray fluorescence (S-XRF). EDX analysis detected 13 elements, showing the occurrence in all tissues, roots, epidermis and nodules. The distribution of the elements in the bean was related to its symbiosis function. The fungi reached high colonization rates in the brachiaria plants. The Se accumulation in shoot plants indicated a possible protective effect provided by R. clarus in U. decumbens to avoid Se accumulation. The S-XRF analysis identified Se in a vesicle of R. clarus within a root fragment, and also, Se presence in D. heterogama spores germinated in Petri dish. In view of the thesis studies, the SEM-EDX and S-XRF techniques were efficient for the soil symbionts characterization allowing a scientific contribution of applicability of these microorganisms.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)As bactérias fixadoras de nitrogênio (BFN) nodulíferas, em simbiose com leguminosas formam estruturas denominadas nódulos que aumentam e eficiência da fixação de N. Os fungos micorrízicos arbusculares (FMAs) são conhecidos por sua eficiência em disponibilizar P para as plantas. A simbiose tripla entre leguminosas, FMAs, e BFN é denominada de tripartite. Na relação tripartite a formação do nódulo protege a BFN, os FMAs fornecem P para o sistema, e as leguminosas fornecem fotoassimilados para ambos simbiontes. Tendo em vista os benefícios nutricionais dessas relações a tese tem como objetivo avaliar o estado nutricional dos microrganismos da associação tripartite e identificar os possíveis mecanismos de FMAs na absorção e compartimentalização de Se em seus esporos como possível estratégia de proteção às plantas. No primeiro estudo feijão-de-lima (Phaseolus lunatus L. Walp) foi cultivado em vasos, aos quais foram adicionados isolados de FMAs (Glomus macrocarpum e Acaulospora colombiana) e de BFN (Bradyrhizobium japonicum), e plantas controle. A quantificação dos elementos minerais nos componentes simbiose tripartida foi realizada utilizando-se espectroscopia de energia dispersiva de raio-X (EDS), e para identificar estruturas utilizou-se a microscopia eletrônica de varredura (MEV). O segundo estudo foi conduzido com capim braquiária (Urochloa decumbens) cultivados por 30 dias em vaso, utilizando os isolados fúngicos (Acaulospora morrowiae, Dentiscutata heterogama e Rhizophagus clarus), plantas controle não inoculadas, e cinco doses de selenato de sódio (0, 2, 4, 6 e 8 mg kg -1Se). Um experimento paralelo foi conduzido em meio ágar utilizando placas de Petri com as mesmas doses de Se do experimento em vaso, o que permitiu que sete esporos de Dentiscutata heterogama crescessem por 15 dias a 37 °C. Foram avaliados a colonização micorrízica e o acúmulo de Se na parte aérea da planta, além da quantificação e visualização de Se nas estruturas de FMAs através de microanálises de fluorescência de raio-X síncrotron (S-XRF). A análise de EDX detectou 13 elementos, mostrando os de ocorrência em todos os tecidos, nas raízes, na epiderme e nos nódulos de feijão. A distribuição dos elementos no feijão foi relacionada à sua função na simbiose. Os fungos alcançaram altas taxas de colonização nas plantas de braquiária. O acúmulo de Se na parte aérea indicou um possível efeito protetor proporcionado por R. clarus em U. decumbens ao evitar acúmulo de Se. A análise por S-XRF identificaram Se uma vesícula de R. clarus, dentro de um fragmento de raiz, além de Se em esporos de D. heterogama cultivados em placa de Petri. Diante dos trabalhos executados as técnicas de MEV-EDS e S-XRF foram eficientes para a caracterização de simbiontes do solo, permitindo uma contribuição científica de aplicabilidade desses microrganismos.Universidade Federal de LavrasPrograma de Pós-graduação em Ciência do SoloUFLAbrasilDepartamento de Ciência do SoloCarneiro, Marco Aurélio CarboneGuilherme, Luiz Roberto GuimarãesOliveira, CynthiaAlves, EduardoCastro, Evaristo Mauro deLopes, GuilhermeSaggin Junior, Orivaldo JoséBamberg, Soraya Marx2019-04-08T14:13:00Z2019-04-08T14:13:00Z2019-04-052019-02-28info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisapplication/pdfBAMBERG, S. M. Conventional and synchrotron-based x-ray studies for characterization of soil symbionts. 2019. 80 p. Tese (Doutorado em Ciência do Solo)–Universidade Federal de Lavras, Lavras, 2019.http://repositorio.ufla.br/jspui/handle/1/33456enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFLAinstname:Universidade Federal de Lavras (UFLA)instacron:UFLA2023-05-11T13:19:29Zoai:localhost:1/33456Repositório InstitucionalPUBhttp://repositorio.ufla.br/oai/requestnivaldo@ufla.br || repositorio.biblioteca@ufla.bropendoar:2023-05-11T13:19:29Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)false
dc.title.none.fl_str_mv Conventional and synchrotron-based x-ray studies for characterization of soil symbionts
Estudos convencionais e baseados em raio-x síncrotron para caracterização de simbiontes mutualistas do solo
title Conventional and synchrotron-based x-ray studies for characterization of soil symbionts
spellingShingle Conventional and synchrotron-based x-ray studies for characterization of soil symbionts
Bamberg, Soraya Marx
X-ray fluorescence (XRF)
Biological fixation
Arbuscular mycorrhizae
Fluorescência de raios-X
Fixação biológica
Micorrizas arbusculares
Microbiologia e Bioquímica do Solo
title_short Conventional and synchrotron-based x-ray studies for characterization of soil symbionts
title_full Conventional and synchrotron-based x-ray studies for characterization of soil symbionts
title_fullStr Conventional and synchrotron-based x-ray studies for characterization of soil symbionts
title_full_unstemmed Conventional and synchrotron-based x-ray studies for characterization of soil symbionts
title_sort Conventional and synchrotron-based x-ray studies for characterization of soil symbionts
author Bamberg, Soraya Marx
author_facet Bamberg, Soraya Marx
author_role author
dc.contributor.none.fl_str_mv Carneiro, Marco Aurélio Carbone
Guilherme, Luiz Roberto Guimarães
Oliveira, Cynthia
Alves, Eduardo
Castro, Evaristo Mauro de
Lopes, Guilherme
Saggin Junior, Orivaldo José
dc.contributor.author.fl_str_mv Bamberg, Soraya Marx
dc.subject.por.fl_str_mv X-ray fluorescence (XRF)
Biological fixation
Arbuscular mycorrhizae
Fluorescência de raios-X
Fixação biológica
Micorrizas arbusculares
Microbiologia e Bioquímica do Solo
topic X-ray fluorescence (XRF)
Biological fixation
Arbuscular mycorrhizae
Fluorescência de raios-X
Fixação biológica
Micorrizas arbusculares
Microbiologia e Bioquímica do Solo
description Nitrogen-fixing bacteria (NFB) in symbiosis with legumes form structures called nodules that increase the N fixation efficiency. Arbuscular mycorrhizal fungi (AMF) are known by their efficiency in obtain P available to plants. The triple symbiosis between legumes, FMAs, and NFB is denominated tripartite. In the tripartite symbiosys the nodule formation protects the NFB, the AMF provide P to the system, and the legumes provide photoassimilates for both symbionts. In view of the nutritional benefits of these relationships the thesis aims are to evaluate the nutritional status of the tripartite association microorganisms and to identify the possible AMF mechanisms in the absorption and compartmentalization of Se in their spores, as a possible strategy to the plant protection. In the first study lima-bean (Phaseolus lunatus L. Walp) was cultivated in pots, to which were added AMF isolates (Glomus macrocarpum and Acaulospora colombiana) and NFB (Bradyrhizobium japonicum), also control plants were added. The quantification of the mineral elements in the tripartite symbiosis components was performed using X-ray dispersive energy spectroscopy (EDX), and scanning electron microscopy (SEM) was used to identify structures. The second study was conducted with Brachiaria decumbens (Urochloa decumbens) cultivated for 30 days in pot, using AMF isolates (Acaulospora morrowiae, Dentiscutata heterogama and Rhizophagus clarus), uninoculated control plants, and five doses of sodium selenate (0.2 , 4, 6 and 8 mg kg -1Se). A parallel experiment was conducted on agar medium using Petri dishes with the same Se doses from the pot experiment, which allowed seven spores of Dentiscutata heterogama fungi to grow for 15 days at 37 °C. Mycorrhizal colonization and the Se in shoot plant accumulation were evaluated, as well as the quantification and visualization of Se in the AMF structures by microanalyses of synchrotron X-ray fluorescence (S-XRF). EDX analysis detected 13 elements, showing the occurrence in all tissues, roots, epidermis and nodules. The distribution of the elements in the bean was related to its symbiosis function. The fungi reached high colonization rates in the brachiaria plants. The Se accumulation in shoot plants indicated a possible protective effect provided by R. clarus in U. decumbens to avoid Se accumulation. The S-XRF analysis identified Se in a vesicle of R. clarus within a root fragment, and also, Se presence in D. heterogama spores germinated in Petri dish. In view of the thesis studies, the SEM-EDX and S-XRF techniques were efficient for the soil symbionts characterization allowing a scientific contribution of applicability of these microorganisms.
publishDate 2019
dc.date.none.fl_str_mv 2019-04-08T14:13:00Z
2019-04-08T14:13:00Z
2019-04-05
2019-02-28
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv BAMBERG, S. M. Conventional and synchrotron-based x-ray studies for characterization of soil symbionts. 2019. 80 p. Tese (Doutorado em Ciência do Solo)–Universidade Federal de Lavras, Lavras, 2019.
http://repositorio.ufla.br/jspui/handle/1/33456
identifier_str_mv BAMBERG, S. M. Conventional and synchrotron-based x-ray studies for characterization of soil symbionts. 2019. 80 p. Tese (Doutorado em Ciência do Solo)–Universidade Federal de Lavras, Lavras, 2019.
url http://repositorio.ufla.br/jspui/handle/1/33456
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Lavras
Programa de Pós-graduação em Ciência do Solo
UFLA
brasil
Departamento de Ciência do Solo
publisher.none.fl_str_mv Universidade Federal de Lavras
Programa de Pós-graduação em Ciência do Solo
UFLA
brasil
Departamento de Ciência do Solo
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFLA
instname:Universidade Federal de Lavras (UFLA)
instacron:UFLA
instname_str Universidade Federal de Lavras (UFLA)
instacron_str UFLA
institution UFLA
reponame_str Repositório Institucional da UFLA
collection Repositório Institucional da UFLA
repository.name.fl_str_mv Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)
repository.mail.fl_str_mv nivaldo@ufla.br || repositorio.biblioteca@ufla.br
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