Seleção diversificadora em Corynebacterium Pseudotuberculosis

Detalhes bibliográficos
Autor(a) principal: Alessandra Lima da Silva
Data de Publicação: 2018
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Repositório Institucional da UFMG
Texto Completo: http://hdl.handle.net/1843/BUOS-B5SG5J
Resumo: Corynebacterium pseudotuberculosis is a Gram-positive, facultative intracellular bacterium with veterinary and medical importance and a global distribution. It infects a variety of mammals, such as sheep, goats, horses, buffalo and humans, and causes economic losses in animal production. Biovar Equi is nitrate positive and has horse and buffalo as exclusive hosts. Biovar Ovis is nitrate negative and has preference for sheep and goats. Antibiotic treatments have reduced efficiency due to the protection provided by the abscesses and current vaccines have different protection efficiency in different hosts. The analysis of positive (diversifying) selection is useful to identify adaptive mutations in this pathogen and to reveal mechanisms of host adaptation and probable targets for control methods. A genome-scale positive selection analysis was performed in C. pseudotuberculosis using 29 strains from different hosts, biovars and countries. The phylogenomic analysis suggested that Ovis diverged recently from Equi biovar, probably after specialization for a new host range. Positive selection was detected in 11 genes, most involved in host colonization processes. The results provide information about the adaptive mutations related to the species lyfestile and suggest a probable drug target.
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spelling Seleção diversificadora em Corynebacterium PseudotuberculosisBioinformáticaBioinformáticaCorynebacterium pseudotuberculosis is a Gram-positive, facultative intracellular bacterium with veterinary and medical importance and a global distribution. It infects a variety of mammals, such as sheep, goats, horses, buffalo and humans, and causes economic losses in animal production. Biovar Equi is nitrate positive and has horse and buffalo as exclusive hosts. Biovar Ovis is nitrate negative and has preference for sheep and goats. Antibiotic treatments have reduced efficiency due to the protection provided by the abscesses and current vaccines have different protection efficiency in different hosts. The analysis of positive (diversifying) selection is useful to identify adaptive mutations in this pathogen and to reveal mechanisms of host adaptation and probable targets for control methods. A genome-scale positive selection analysis was performed in C. pseudotuberculosis using 29 strains from different hosts, biovars and countries. The phylogenomic analysis suggested that Ovis diverged recently from Equi biovar, probably after specialization for a new host range. Positive selection was detected in 11 genes, most involved in host colonization processes. The results provide information about the adaptive mutations related to the species lyfestile and suggest a probable drug target.Corynebacterium pseudotuberculosis é uma bactéria Gram-positiva e intracelular facultativa de importância médica e veterinária, e distribuição global. A espécie infecta uma variedade de mamíferos, como ovelhas, cabras, cavalos, búfalos e humanos, e causa perdas econômicas na produção animal. O biovar Equi é nitrato positivo e tem o cavalo e o búfalo como hospedeiros exclusivos. O biovar Ovis é nitrato negativo e tem preferência por ovinos e caprinos. Os tratamentos com antibióticos vêm perdendo eficácia, devido à proteção proporcionada pelos abscessos, e as vacinas atuais apresentam eficiência de proteção diferente em diferentes hospedeiros. A análise de seleção positiva (diversificadora) é útil para identificar mutações adaptativas neste patógeno e revelar mecanismos de adaptação ao hospedeiro e prováveis alvos para métodos de controle. Uma análise de seleção positiva em escala genômica foi realizada em C. pseudotuberculosis usando 29 linhagens de diferentes hospedeiros, biovares e países. A análise filogenômica sugeriu que Ovis divergiu a partir do biovar Equi, provavelmente depois da especialização para um subconjunto de hospedeiros. A seleção positiva foi detectada em 11 genes, a maior parte envolvida em processos de colonização de hospedeiro. Os resultados fornecem informações sobre as mutações adaptativas relacionadas ao estilo de vida da espécie e sugerem um provável alvo de droga.Universidade Federal de Minas GeraisUFMGVasco Ariston de Carvalho AzevedoMarcus Vinicius Canário VianaAristoteles Goes NetoAnne Cybelle PintoRodrigo Bentes KatoAlessandra Lima da Silva2019-08-09T19:18:43Z2019-08-09T19:18:43Z2018-07-30info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttp://hdl.handle.net/1843/BUOS-B5SG5Jinfo:eu-repo/semantics/openAccessporreponame:Repositório Institucional da UFMGinstname:Universidade Federal de Minas Gerais (UFMG)instacron:UFMG2019-11-14T08:44:33Zoai:repositorio.ufmg.br:1843/BUOS-B5SG5JRepositório InstitucionalPUBhttps://repositorio.ufmg.br/oairepositorio@ufmg.bropendoar:2019-11-14T08:44:33Repositório Institucional da UFMG - Universidade Federal de Minas Gerais (UFMG)false
dc.title.none.fl_str_mv Seleção diversificadora em Corynebacterium Pseudotuberculosis
title Seleção diversificadora em Corynebacterium Pseudotuberculosis
spellingShingle Seleção diversificadora em Corynebacterium Pseudotuberculosis
Alessandra Lima da Silva
Bioinformática
Bioinformática
title_short Seleção diversificadora em Corynebacterium Pseudotuberculosis
title_full Seleção diversificadora em Corynebacterium Pseudotuberculosis
title_fullStr Seleção diversificadora em Corynebacterium Pseudotuberculosis
title_full_unstemmed Seleção diversificadora em Corynebacterium Pseudotuberculosis
title_sort Seleção diversificadora em Corynebacterium Pseudotuberculosis
author Alessandra Lima da Silva
author_facet Alessandra Lima da Silva
author_role author
dc.contributor.none.fl_str_mv Vasco Ariston de Carvalho Azevedo
Marcus Vinicius Canário Viana
Aristoteles Goes Neto
Anne Cybelle Pinto
Rodrigo Bentes Kato
dc.contributor.author.fl_str_mv Alessandra Lima da Silva
dc.subject.por.fl_str_mv Bioinformática
Bioinformática
topic Bioinformática
Bioinformática
description Corynebacterium pseudotuberculosis is a Gram-positive, facultative intracellular bacterium with veterinary and medical importance and a global distribution. It infects a variety of mammals, such as sheep, goats, horses, buffalo and humans, and causes economic losses in animal production. Biovar Equi is nitrate positive and has horse and buffalo as exclusive hosts. Biovar Ovis is nitrate negative and has preference for sheep and goats. Antibiotic treatments have reduced efficiency due to the protection provided by the abscesses and current vaccines have different protection efficiency in different hosts. The analysis of positive (diversifying) selection is useful to identify adaptive mutations in this pathogen and to reveal mechanisms of host adaptation and probable targets for control methods. A genome-scale positive selection analysis was performed in C. pseudotuberculosis using 29 strains from different hosts, biovars and countries. The phylogenomic analysis suggested that Ovis diverged recently from Equi biovar, probably after specialization for a new host range. Positive selection was detected in 11 genes, most involved in host colonization processes. The results provide information about the adaptive mutations related to the species lyfestile and suggest a probable drug target.
publishDate 2018
dc.date.none.fl_str_mv 2018-07-30
2019-08-09T19:18:43Z
2019-08-09T19:18:43Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1843/BUOS-B5SG5J
url http://hdl.handle.net/1843/BUOS-B5SG5J
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Minas Gerais
UFMG
publisher.none.fl_str_mv Universidade Federal de Minas Gerais
UFMG
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFMG
instname:Universidade Federal de Minas Gerais (UFMG)
instacron:UFMG
instname_str Universidade Federal de Minas Gerais (UFMG)
instacron_str UFMG
institution UFMG
reponame_str Repositório Institucional da UFMG
collection Repositório Institucional da UFMG
repository.name.fl_str_mv Repositório Institucional da UFMG - Universidade Federal de Minas Gerais (UFMG)
repository.mail.fl_str_mv repositorio@ufmg.br
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