Bayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemia
Autor(a) principal: | |
---|---|
Data de Publicação: | 2020 |
Outros Autores: | , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UFMG |
Texto Completo: | http://hdl.handle.net/1843/51700 https://orcid.org/0000-0003-0395-358X https://orcid.org/0000-0003-2823-6288 |
Resumo: | Objective: Equine Infectious Anemia (EIA) is caused by a retrovirus. The infected animal is the main source of the virus, and a laboratory diagnostic test is essential for the identification of infected horses when EIA cannot be definitively diagnosed clinically. EIA can be diagnosed based on serology, and serology methods often have limitations due to the uncertainty of sensitivity and specificity estimates. Our aim was to investigate the accuracy of these serological tests with a Bayesian model, as a gold standard for the identification of EIAV does not exist. Methods: Validation studies for serological tests for EIA diagnosis are necessary. Using ROC curve analysis, we examined three possible cut-off values, 0.220, 0.228 and 0.232, for the rgp90 ELISA. In this study, we performed a Bayesian analysis of diagnostic data from an enzyme-linked immunosorbent assay (ELISA) of recombinant envelope glycoprotein gp90 and the classical agar gel immunodiffusion (AGID) test. For each scenario cut-off, we estimated the sensitivity and specificity of each test separately and of the two tests in combination. Results: The upper limits of the posterior equally tailed 95% credible intervals for the Sensitivities (Se) and Specificities (Sp) of these two tests were as follows: AGID test alone, Se 85% and Sp 99%; ELISA alone, Se 99% and Sp 97%; and for the tests in combination, AGID test, Se 99% and Sp 100%; and ELISA, Se 99% and Sp 97%. Conclusion: In this study, the Bayesian method was found to be a valuable tool for estimating the sensitivities and specificities of ELISA and AGID tests. In addition, the combination of those two tests was found to have better diagnostic accuracy than either test alone. |
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2023-04-06T19:51:53Z2023-04-06T19:51:53Z2020-08-06312640-1223http://hdl.handle.net/1843/51700https://orcid.org/0000-0003-0395-358Xhttps://orcid.org/0000-0003-2823-6288Objective: Equine Infectious Anemia (EIA) is caused by a retrovirus. The infected animal is the main source of the virus, and a laboratory diagnostic test is essential for the identification of infected horses when EIA cannot be definitively diagnosed clinically. EIA can be diagnosed based on serology, and serology methods often have limitations due to the uncertainty of sensitivity and specificity estimates. Our aim was to investigate the accuracy of these serological tests with a Bayesian model, as a gold standard for the identification of EIAV does not exist. Methods: Validation studies for serological tests for EIA diagnosis are necessary. Using ROC curve analysis, we examined three possible cut-off values, 0.220, 0.228 and 0.232, for the rgp90 ELISA. In this study, we performed a Bayesian analysis of diagnostic data from an enzyme-linked immunosorbent assay (ELISA) of recombinant envelope glycoprotein gp90 and the classical agar gel immunodiffusion (AGID) test. For each scenario cut-off, we estimated the sensitivity and specificity of each test separately and of the two tests in combination. Results: The upper limits of the posterior equally tailed 95% credible intervals for the Sensitivities (Se) and Specificities (Sp) of these two tests were as follows: AGID test alone, Se 85% and Sp 99%; ELISA alone, Se 99% and Sp 97%; and for the tests in combination, AGID test, Se 99% and Sp 100%; and ELISA, Se 99% and Sp 97%. Conclusion: In this study, the Bayesian method was found to be a valuable tool for estimating the sensitivities and specificities of ELISA and AGID tests. In addition, the combination of those two tests was found to have better diagnostic accuracy than either test alone.Objetivo: A Anemia Infecciosa Equina (AIE) é causada por um retrovírus. O animal infectado é a principal fonte do vírus, e um teste de diagnóstico laboratorial é essencial para a identificação de cavalos infectados quando a AIE não pode ser diagnosticada clinicamente de forma definitiva. A EIA pode ser diagnosticada com base na sorologia, e os métodos de sorologia geralmente têm limitações devido à incerteza das estimativas de sensibilidade e especificidade. Nosso objetivo foi investigar a acurácia desses testes sorológicos com um modelo bayesiano, pois não existe um padrão-ouro para a identificação do EIAV. Métodos: Estudos de validação de testes sorológicos para diagnóstico de AIE são necessários. Usando a análise da curva ROC, examinamos três possíveis valores de corte, 0,220, 0,228 e 0,232, para o rgp90 ELISA. Neste estudo, realizamos uma análise bayesiana dos dados diagnósticos de um ensaio imunoenzimático (ELISA) da glicoproteína de envelope recombinante gp90 e do teste clássico de imunodifusão em gel de ágar (IDGA). Para cada corte de cenário, estimamos a sensibilidade e especificidade de cada teste separadamente e dos dois testes em combinação. Resultados: Os limites superiores dos intervalos credíveis de 95% posteriores igualmente atados para as Sensibilidades (Se) e Especificidades (Sp) destes dois testes foram os seguintes: teste AGID sozinho, Se 85% e Sp 99%; ELISA sozinho, Se 99% e Sp 97%; e para os testes combinados, teste AGID, Se 99% e Sp 100%; e ELISA, Se 99% e Sp 97%. Conclusão: Neste estudo, o método bayesiano mostrou ser uma ferramenta valiosa para estimar as sensibilidades e especificidades dos testes ELISA e AGID. Além disso, a combinação desses dois testes apresentou melhor precisão diagnóstica do que qualquer um dos testes isoladamente.CNPq - Conselho Nacional de Desenvolvimento Científico e TecnológicoOutra AgênciaengUniversidade Federal de Minas GeraisUFMGBrasilCOLTEC - COLEGIO TECNICOVET - DEPARTAMENTO DE MEDICINA VETERINÁRIA PREVENTIVAJournal of Veterinary Medicine and Animal SciencesVirologia veterináriaVeterinária - DiagnósticoCavaloAnemia infecciosa equinaTestes sorológicosCurva ROCEnsaio de imunoadsorção enzimáticaEIASensitivitySpecificityBayesian modelROC curveBayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemiaEstimativa bayesiana dos parâmetros RGP90 ELISA para diagnóstico de anemia infecciosa equinainfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttps://meddocsonline.org/journal-of-veterinary-medicine-and-animal-sciences-archive.htmlRejane Silva DinizJenner Karlisson Pimenta dos ReisJoão Paulo Amaral Haddadapplication/pdfinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFMGinstname:Universidade Federal de Minas Gerais (UFMG)instacron:UFMGLICENSELicense.txtLicense.txttext/plain; charset=utf-82042https://repositorio.ufmg.br/bitstream/1843/51700/1/License.txtfa505098d172de0bc8864fc1287ffe22MD51ORIGINALBayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemia.pdfBayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemia.pdfapplication/pdf271162https://repositorio.ufmg.br/bitstream/1843/51700/2/Bayesian%20estimation%20of%20RGP90%20ELISA%20parameters%20for%20diagnosis%20of%20equine%20infectious%20anemia.pdfe1bc7e55ae6f5752650e066a3d9f2ce8MD521843/517002023-04-06 16:51:53.394oai:repositorio.ufmg.br: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Repositório de PublicaçõesPUBhttps://repositorio.ufmg.br/oaiopendoar:2023-04-06T19:51:53Repositório Institucional da UFMG - Universidade Federal de Minas Gerais (UFMG)false |
dc.title.pt_BR.fl_str_mv |
Bayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemia |
dc.title.alternative.pt_BR.fl_str_mv |
Estimativa bayesiana dos parâmetros RGP90 ELISA para diagnóstico de anemia infecciosa equina |
title |
Bayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemia |
spellingShingle |
Bayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemia Rejane Silva Diniz EIA Sensitivity Specificity Bayesian model ROC curve Virologia veterinária Veterinária - Diagnóstico Cavalo Anemia infecciosa equina Testes sorológicos Curva ROC Ensaio de imunoadsorção enzimática |
title_short |
Bayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemia |
title_full |
Bayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemia |
title_fullStr |
Bayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemia |
title_full_unstemmed |
Bayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemia |
title_sort |
Bayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemia |
author |
Rejane Silva Diniz |
author_facet |
Rejane Silva Diniz Jenner Karlisson Pimenta dos Reis João Paulo Amaral Haddad |
author_role |
author |
author2 |
Jenner Karlisson Pimenta dos Reis João Paulo Amaral Haddad |
author2_role |
author author |
dc.contributor.author.fl_str_mv |
Rejane Silva Diniz Jenner Karlisson Pimenta dos Reis João Paulo Amaral Haddad |
dc.subject.por.fl_str_mv |
EIA Sensitivity Specificity Bayesian model ROC curve |
topic |
EIA Sensitivity Specificity Bayesian model ROC curve Virologia veterinária Veterinária - Diagnóstico Cavalo Anemia infecciosa equina Testes sorológicos Curva ROC Ensaio de imunoadsorção enzimática |
dc.subject.other.pt_BR.fl_str_mv |
Virologia veterinária Veterinária - Diagnóstico Cavalo Anemia infecciosa equina Testes sorológicos Curva ROC Ensaio de imunoadsorção enzimática |
description |
Objective: Equine Infectious Anemia (EIA) is caused by a retrovirus. The infected animal is the main source of the virus, and a laboratory diagnostic test is essential for the identification of infected horses when EIA cannot be definitively diagnosed clinically. EIA can be diagnosed based on serology, and serology methods often have limitations due to the uncertainty of sensitivity and specificity estimates. Our aim was to investigate the accuracy of these serological tests with a Bayesian model, as a gold standard for the identification of EIAV does not exist. Methods: Validation studies for serological tests for EIA diagnosis are necessary. Using ROC curve analysis, we examined three possible cut-off values, 0.220, 0.228 and 0.232, for the rgp90 ELISA. In this study, we performed a Bayesian analysis of diagnostic data from an enzyme-linked immunosorbent assay (ELISA) of recombinant envelope glycoprotein gp90 and the classical agar gel immunodiffusion (AGID) test. For each scenario cut-off, we estimated the sensitivity and specificity of each test separately and of the two tests in combination. Results: The upper limits of the posterior equally tailed 95% credible intervals for the Sensitivities (Se) and Specificities (Sp) of these two tests were as follows: AGID test alone, Se 85% and Sp 99%; ELISA alone, Se 99% and Sp 97%; and for the tests in combination, AGID test, Se 99% and Sp 100%; and ELISA, Se 99% and Sp 97%. Conclusion: In this study, the Bayesian method was found to be a valuable tool for estimating the sensitivities and specificities of ELISA and AGID tests. In addition, the combination of those two tests was found to have better diagnostic accuracy than either test alone. |
publishDate |
2020 |
dc.date.issued.fl_str_mv |
2020-08-06 |
dc.date.accessioned.fl_str_mv |
2023-04-06T19:51:53Z |
dc.date.available.fl_str_mv |
2023-04-06T19:51:53Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/1843/51700 |
dc.identifier.issn.pt_BR.fl_str_mv |
2640-1223 |
dc.identifier.orcid.pt_BR.fl_str_mv |
https://orcid.org/0000-0003-0395-358X https://orcid.org/0000-0003-2823-6288 |
identifier_str_mv |
2640-1223 |
url |
http://hdl.handle.net/1843/51700 https://orcid.org/0000-0003-0395-358X https://orcid.org/0000-0003-2823-6288 |
dc.language.iso.fl_str_mv |
eng |
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eng |
dc.relation.ispartof.pt_BR.fl_str_mv |
Journal of Veterinary Medicine and Animal Sciences |
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info:eu-repo/semantics/openAccess |
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openAccess |
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Universidade Federal de Minas Gerais |
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UFMG |
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Brasil |
dc.publisher.department.fl_str_mv |
COLTEC - COLEGIO TECNICO VET - DEPARTAMENTO DE MEDICINA VETERINÁRIA PREVENTIVA |
publisher.none.fl_str_mv |
Universidade Federal de Minas Gerais |
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reponame:Repositório Institucional da UFMG instname:Universidade Federal de Minas Gerais (UFMG) instacron:UFMG |
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