Bayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemia

Detalhes bibliográficos
Autor(a) principal: Rejane Silva Diniz
Data de Publicação: 2020
Outros Autores: Jenner Karlisson Pimenta dos Reis, João Paulo Amaral Haddad
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFMG
Texto Completo: http://hdl.handle.net/1843/51700
https://orcid.org/0000-0003-0395-358X
https://orcid.org/0000-0003-2823-6288
Resumo: Objective: Equine Infectious Anemia (EIA) is caused by a retrovirus. The infected animal is the main source of the virus, and a laboratory diagnostic test is essential for the identification of infected horses when EIA cannot be definitively diagnosed clinically. EIA can be diagnosed based on serology, and serology methods often have limitations due to the uncertainty of sensitivity and specificity estimates. Our aim was to investigate the accuracy of these serological tests with a Bayesian model, as a gold standard for the identification of EIAV does not exist. Methods: Validation studies for serological tests for EIA diagnosis are necessary. Using ROC curve analysis, we examined three possible cut-off values, 0.220, 0.228 and 0.232, for the rgp90 ELISA. In this study, we performed a Bayesian analysis of diagnostic data from an enzyme-linked immunosorbent assay (ELISA) of recombinant envelope glycoprotein gp90 and the classical agar gel immunodiffusion (AGID) test. For each scenario cut-off, we estimated the sensitivity and specificity of each test separately and of the two tests in combination. Results: The upper limits of the posterior equally tailed 95% credible intervals for the Sensitivities (Se) and Specificities (Sp) of these two tests were as follows: AGID test alone, Se 85% and Sp 99%; ELISA alone, Se 99% and Sp 97%; and for the tests in combination, AGID test, Se 99% and Sp 100%; and ELISA, Se 99% and Sp 97%. Conclusion: In this study, the Bayesian method was found to be a valuable tool for estimating the sensitivities and specificities of ELISA and AGID tests. In addition, the combination of those two tests was found to have better diagnostic accuracy than either test alone.
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spelling 2023-04-06T19:51:53Z2023-04-06T19:51:53Z2020-08-06312640-1223http://hdl.handle.net/1843/51700https://orcid.org/0000-0003-0395-358Xhttps://orcid.org/0000-0003-2823-6288Objective: Equine Infectious Anemia (EIA) is caused by a retrovirus. The infected animal is the main source of the virus, and a laboratory diagnostic test is essential for the identification of infected horses when EIA cannot be definitively diagnosed clinically. EIA can be diagnosed based on serology, and serology methods often have limitations due to the uncertainty of sensitivity and specificity estimates. Our aim was to investigate the accuracy of these serological tests with a Bayesian model, as a gold standard for the identification of EIAV does not exist. Methods: Validation studies for serological tests for EIA diagnosis are necessary. Using ROC curve analysis, we examined three possible cut-off values, 0.220, 0.228 and 0.232, for the rgp90 ELISA. In this study, we performed a Bayesian analysis of diagnostic data from an enzyme-linked immunosorbent assay (ELISA) of recombinant envelope glycoprotein gp90 and the classical agar gel immunodiffusion (AGID) test. For each scenario cut-off, we estimated the sensitivity and specificity of each test separately and of the two tests in combination. Results: The upper limits of the posterior equally tailed 95% credible intervals for the Sensitivities (Se) and Specificities (Sp) of these two tests were as follows: AGID test alone, Se 85% and Sp 99%; ELISA alone, Se 99% and Sp 97%; and for the tests in combination, AGID test, Se 99% and Sp 100%; and ELISA, Se 99% and Sp 97%. Conclusion: In this study, the Bayesian method was found to be a valuable tool for estimating the sensitivities and specificities of ELISA and AGID tests. In addition, the combination of those two tests was found to have better diagnostic accuracy than either test alone.Objetivo: A Anemia Infecciosa Equina (AIE) é causada por um retrovírus. O animal infectado é a principal fonte do vírus, e um teste de diagnóstico laboratorial é essencial para a identificação de cavalos infectados quando a AIE não pode ser diagnosticada clinicamente de forma definitiva. A EIA pode ser diagnosticada com base na sorologia, e os métodos de sorologia geralmente têm limitações devido à incerteza das estimativas de sensibilidade e especificidade. Nosso objetivo foi investigar a acurácia desses testes sorológicos com um modelo bayesiano, pois não existe um padrão-ouro para a identificação do EIAV. Métodos: Estudos de validação de testes sorológicos para diagnóstico de AIE são necessários. Usando a análise da curva ROC, examinamos três possíveis valores de corte, 0,220, 0,228 e 0,232, para o rgp90 ELISA. Neste estudo, realizamos uma análise bayesiana dos dados diagnósticos de um ensaio imunoenzimático (ELISA) da glicoproteína de envelope recombinante gp90 e do teste clássico de imunodifusão em gel de ágar (IDGA). Para cada corte de cenário, estimamos a sensibilidade e especificidade de cada teste separadamente e dos dois testes em combinação. Resultados: Os limites superiores dos intervalos credíveis de 95% posteriores igualmente atados para as Sensibilidades (Se) e Especificidades (Sp) destes dois testes foram os seguintes: teste AGID sozinho, Se 85% e Sp 99%; ELISA sozinho, Se 99% e Sp 97%; e para os testes combinados, teste AGID, Se 99% e Sp 100%; e ELISA, Se 99% e Sp 97%. Conclusão: Neste estudo, o método bayesiano mostrou ser uma ferramenta valiosa para estimar as sensibilidades e especificidades dos testes ELISA e AGID. Além disso, a combinação desses dois testes apresentou melhor precisão diagnóstica do que qualquer um dos testes isoladamente.CNPq - Conselho Nacional de Desenvolvimento Científico e TecnológicoOutra AgênciaengUniversidade Federal de Minas GeraisUFMGBrasilCOLTEC - COLEGIO TECNICOVET - DEPARTAMENTO DE MEDICINA VETERINÁRIA PREVENTIVAJournal of Veterinary Medicine and Animal SciencesVirologia veterináriaVeterinária - DiagnósticoCavaloAnemia infecciosa equinaTestes sorológicosCurva ROCEnsaio de imunoadsorção enzimáticaEIASensitivitySpecificityBayesian modelROC curveBayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemiaEstimativa bayesiana dos parâmetros RGP90 ELISA para diagnóstico de anemia infecciosa equinainfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttps://meddocsonline.org/journal-of-veterinary-medicine-and-animal-sciences-archive.htmlRejane Silva DinizJenner Karlisson Pimenta dos ReisJoão Paulo Amaral Haddadapplication/pdfinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFMGinstname:Universidade Federal de Minas Gerais (UFMG)instacron:UFMGLICENSELicense.txtLicense.txttext/plain; charset=utf-82042https://repositorio.ufmg.br/bitstream/1843/51700/1/License.txtfa505098d172de0bc8864fc1287ffe22MD51ORIGINALBayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemia.pdfBayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemia.pdfapplication/pdf271162https://repositorio.ufmg.br/bitstream/1843/51700/2/Bayesian%20estimation%20of%20RGP90%20ELISA%20parameters%20for%20diagnosis%20of%20equine%20infectious%20anemia.pdfe1bc7e55ae6f5752650e066a3d9f2ce8MD521843/517002023-04-06 16:51:53.394oai:repositorio.ufmg.br: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Repositório de PublicaçõesPUBhttps://repositorio.ufmg.br/oaiopendoar:2023-04-06T19:51:53Repositório Institucional da UFMG - Universidade Federal de Minas Gerais (UFMG)false
dc.title.pt_BR.fl_str_mv Bayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemia
dc.title.alternative.pt_BR.fl_str_mv Estimativa bayesiana dos parâmetros RGP90 ELISA para diagnóstico de anemia infecciosa equina
title Bayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemia
spellingShingle Bayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemia
Rejane Silva Diniz
EIA
Sensitivity
Specificity
Bayesian model
ROC curve
Virologia veterinária
Veterinária - Diagnóstico
Cavalo
Anemia infecciosa equina
Testes sorológicos
Curva ROC
Ensaio de imunoadsorção enzimática
title_short Bayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemia
title_full Bayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemia
title_fullStr Bayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemia
title_full_unstemmed Bayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemia
title_sort Bayesian estimation of RGP90 ELISA parameters for diagnosis of equine infectious anemia
author Rejane Silva Diniz
author_facet Rejane Silva Diniz
Jenner Karlisson Pimenta dos Reis
João Paulo Amaral Haddad
author_role author
author2 Jenner Karlisson Pimenta dos Reis
João Paulo Amaral Haddad
author2_role author
author
dc.contributor.author.fl_str_mv Rejane Silva Diniz
Jenner Karlisson Pimenta dos Reis
João Paulo Amaral Haddad
dc.subject.por.fl_str_mv EIA
Sensitivity
Specificity
Bayesian model
ROC curve
topic EIA
Sensitivity
Specificity
Bayesian model
ROC curve
Virologia veterinária
Veterinária - Diagnóstico
Cavalo
Anemia infecciosa equina
Testes sorológicos
Curva ROC
Ensaio de imunoadsorção enzimática
dc.subject.other.pt_BR.fl_str_mv Virologia veterinária
Veterinária - Diagnóstico
Cavalo
Anemia infecciosa equina
Testes sorológicos
Curva ROC
Ensaio de imunoadsorção enzimática
description Objective: Equine Infectious Anemia (EIA) is caused by a retrovirus. The infected animal is the main source of the virus, and a laboratory diagnostic test is essential for the identification of infected horses when EIA cannot be definitively diagnosed clinically. EIA can be diagnosed based on serology, and serology methods often have limitations due to the uncertainty of sensitivity and specificity estimates. Our aim was to investigate the accuracy of these serological tests with a Bayesian model, as a gold standard for the identification of EIAV does not exist. Methods: Validation studies for serological tests for EIA diagnosis are necessary. Using ROC curve analysis, we examined three possible cut-off values, 0.220, 0.228 and 0.232, for the rgp90 ELISA. In this study, we performed a Bayesian analysis of diagnostic data from an enzyme-linked immunosorbent assay (ELISA) of recombinant envelope glycoprotein gp90 and the classical agar gel immunodiffusion (AGID) test. For each scenario cut-off, we estimated the sensitivity and specificity of each test separately and of the two tests in combination. Results: The upper limits of the posterior equally tailed 95% credible intervals for the Sensitivities (Se) and Specificities (Sp) of these two tests were as follows: AGID test alone, Se 85% and Sp 99%; ELISA alone, Se 99% and Sp 97%; and for the tests in combination, AGID test, Se 99% and Sp 100%; and ELISA, Se 99% and Sp 97%. Conclusion: In this study, the Bayesian method was found to be a valuable tool for estimating the sensitivities and specificities of ELISA and AGID tests. In addition, the combination of those two tests was found to have better diagnostic accuracy than either test alone.
publishDate 2020
dc.date.issued.fl_str_mv 2020-08-06
dc.date.accessioned.fl_str_mv 2023-04-06T19:51:53Z
dc.date.available.fl_str_mv 2023-04-06T19:51:53Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1843/51700
dc.identifier.issn.pt_BR.fl_str_mv 2640-1223
dc.identifier.orcid.pt_BR.fl_str_mv https://orcid.org/0000-0003-0395-358X
https://orcid.org/0000-0003-2823-6288
identifier_str_mv 2640-1223
url http://hdl.handle.net/1843/51700
https://orcid.org/0000-0003-0395-358X
https://orcid.org/0000-0003-2823-6288
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartof.pt_BR.fl_str_mv Journal of Veterinary Medicine and Animal Sciences
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dc.publisher.none.fl_str_mv Universidade Federal de Minas Gerais
dc.publisher.initials.fl_str_mv UFMG
dc.publisher.country.fl_str_mv Brasil
dc.publisher.department.fl_str_mv COLTEC - COLEGIO TECNICO
VET - DEPARTAMENTO DE MEDICINA VETERINÁRIA PREVENTIVA
publisher.none.fl_str_mv Universidade Federal de Minas Gerais
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFMG
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