Cost analysis of smear microscopy and the xpert assay for tuberculosis diagnosis: average turnaround time

Detalhes bibliográficos
Autor(a) principal: Lida Jouca
Data de Publicação: 2020
Outros Autores: Cristiane Aparecida Menezes de Pádua, Isabela Neves de Almeida, Silvana Spindola de Miranda, Lucas Benício Dos Santos, Caroline Gontijo, Valéria Martins Soares, Suely Alves, Maria c. Vater, Afranio Kritski, Wânia da Silva Carvalho
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFMG
Texto Completo: http://hdl.handle.net/1843/62757
Resumo: Introduction: Rapid and accurate tuberculosis detection is critical for improving patient diagnosis and decreasing tuberculosis transmission. Molecular assays can significantly increase laboratory costs; therefore, the average time and economic impact should be evaluated before implementing a new technology. The aim of this study was to evaluate the cost and average turnaround time of smear microscopy and Xpert assay at a university hospital. Methods: The turnaround time and cost of the laboratory diagnosis of tuberculosis were calculated based on the mean cost and activity based costing (ABC). Results: The average turnaround time for smear microscopy was 16.6 hours while that for Xpert was 24.1 hours. The Xpert had a mean cost of USD 17.37 with an ABC of USD 10.86, while smear microscopy had a mean cost of USD 13.31 with an ABC of USD 6.01. The sensitivity of smear microscopy was 42.9% and its specificity was 99.1%, while the Xpert assay had a sensitivity of 100% and a specificity of 96.7%. Conclusions: The Xpert assay has high accuracy; however, the turnaround time and cost of smear microscopy were lower than those of Xpert.
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spelling 2024-01-12T22:40:53Z2024-01-12T22:40:53Z202053e202003141610.1590/0037-8682-0314-202016789849http://hdl.handle.net/1843/62757Introduction: Rapid and accurate tuberculosis detection is critical for improving patient diagnosis and decreasing tuberculosis transmission. Molecular assays can significantly increase laboratory costs; therefore, the average time and economic impact should be evaluated before implementing a new technology. The aim of this study was to evaluate the cost and average turnaround time of smear microscopy and Xpert assay at a university hospital. Methods: The turnaround time and cost of the laboratory diagnosis of tuberculosis were calculated based on the mean cost and activity based costing (ABC). Results: The average turnaround time for smear microscopy was 16.6 hours while that for Xpert was 24.1 hours. The Xpert had a mean cost of USD 17.37 with an ABC of USD 10.86, while smear microscopy had a mean cost of USD 13.31 with an ABC of USD 6.01. The sensitivity of smear microscopy was 42.9% and its specificity was 99.1%, while the Xpert assay had a sensitivity of 100% and a specificity of 96.7%. Conclusions: The Xpert assay has high accuracy; however, the turnaround time and cost of smear microscopy were lower than those of Xpert.engUniversidade Federal de Minas GeraisUFMGBrasilFAR - DEPARTAMENTO DE FARMÁCIA SOCIALMED - DEPARTAMENTO DE CLÍNICA MÉDICARevista da Sociedade Brasileira de Medicina TropicalMycobacterium tuberculosisMolecular Diagnostic TechniquesTuberculosis, PulmonaryCosts and Cost AnalysisHealth SystemsMycobacterium tuberculosisMolecular diagnosticTuberculosis, PulmonaryCost AnalysisHealth SystemsCost analysis of smear microscopy and the xpert assay for tuberculosis diagnosis: average turnaround timeinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttps://doi.org/10.1590/0037-8682-0314-2020Lida JoucaCristiane Aparecida Menezes de PáduaIsabela Neves de AlmeidaSilvana Spindola de MirandaLucas Benício Dos SantosCaroline GontijoValéria Martins SoaresSuely AlvesMaria c. VaterAfranio KritskiWânia da Silva Carvalhoapplication/pdfinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFMGinstname:Universidade Federal de Minas Gerais (UFMG)instacron:UFMGLICENSELicense.txtLicense.txttext/plain; charset=utf-82042https://repositorio.ufmg.br/bitstream/1843/62757/1/License.txtfa505098d172de0bc8864fc1287ffe22MD51ORIGINALCost analysis of smear microscopy and the Xpert assay for pdfa.pdfCost analysis of smear microscopy and the Xpert assay for pdfa.pdfapplication/pdf374296https://repositorio.ufmg.br/bitstream/1843/62757/2/Cost%20analysis%20of%20smear%20microscopy%20and%20the%20Xpert%20assay%20for%20pdfa.pdfbfe22f4d52af0712bebdafa0ed4847e8MD521843/627572024-01-15 13:15:39.734oai:repositorio.ufmg.br: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Repositório de PublicaçõesPUBhttps://repositorio.ufmg.br/oaiopendoar:2024-01-15T16:15:39Repositório Institucional da UFMG - Universidade Federal de Minas Gerais (UFMG)false
dc.title.pt_BR.fl_str_mv Cost analysis of smear microscopy and the xpert assay for tuberculosis diagnosis: average turnaround time
title Cost analysis of smear microscopy and the xpert assay for tuberculosis diagnosis: average turnaround time
spellingShingle Cost analysis of smear microscopy and the xpert assay for tuberculosis diagnosis: average turnaround time
Lida Jouca
Mycobacterium tuberculosis
Molecular diagnostic
Tuberculosis, Pulmonary
Cost Analysis
Health Systems
Mycobacterium tuberculosis
Molecular Diagnostic Techniques
Tuberculosis, Pulmonary
Costs and Cost Analysis
Health Systems
title_short Cost analysis of smear microscopy and the xpert assay for tuberculosis diagnosis: average turnaround time
title_full Cost analysis of smear microscopy and the xpert assay for tuberculosis diagnosis: average turnaround time
title_fullStr Cost analysis of smear microscopy and the xpert assay for tuberculosis diagnosis: average turnaround time
title_full_unstemmed Cost analysis of smear microscopy and the xpert assay for tuberculosis diagnosis: average turnaround time
title_sort Cost analysis of smear microscopy and the xpert assay for tuberculosis diagnosis: average turnaround time
author Lida Jouca
author_facet Lida Jouca
Cristiane Aparecida Menezes de Pádua
Isabela Neves de Almeida
Silvana Spindola de Miranda
Lucas Benício Dos Santos
Caroline Gontijo
Valéria Martins Soares
Suely Alves
Maria c. Vater
Afranio Kritski
Wânia da Silva Carvalho
author_role author
author2 Cristiane Aparecida Menezes de Pádua
Isabela Neves de Almeida
Silvana Spindola de Miranda
Lucas Benício Dos Santos
Caroline Gontijo
Valéria Martins Soares
Suely Alves
Maria c. Vater
Afranio Kritski
Wânia da Silva Carvalho
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Lida Jouca
Cristiane Aparecida Menezes de Pádua
Isabela Neves de Almeida
Silvana Spindola de Miranda
Lucas Benício Dos Santos
Caroline Gontijo
Valéria Martins Soares
Suely Alves
Maria c. Vater
Afranio Kritski
Wânia da Silva Carvalho
dc.subject.por.fl_str_mv Mycobacterium tuberculosis
Molecular diagnostic
Tuberculosis, Pulmonary
Cost Analysis
Health Systems
topic Mycobacterium tuberculosis
Molecular diagnostic
Tuberculosis, Pulmonary
Cost Analysis
Health Systems
Mycobacterium tuberculosis
Molecular Diagnostic Techniques
Tuberculosis, Pulmonary
Costs and Cost Analysis
Health Systems
dc.subject.other.pt_BR.fl_str_mv Mycobacterium tuberculosis
Molecular Diagnostic Techniques
Tuberculosis, Pulmonary
Costs and Cost Analysis
Health Systems
description Introduction: Rapid and accurate tuberculosis detection is critical for improving patient diagnosis and decreasing tuberculosis transmission. Molecular assays can significantly increase laboratory costs; therefore, the average time and economic impact should be evaluated before implementing a new technology. The aim of this study was to evaluate the cost and average turnaround time of smear microscopy and Xpert assay at a university hospital. Methods: The turnaround time and cost of the laboratory diagnosis of tuberculosis were calculated based on the mean cost and activity based costing (ABC). Results: The average turnaround time for smear microscopy was 16.6 hours while that for Xpert was 24.1 hours. The Xpert had a mean cost of USD 17.37 with an ABC of USD 10.86, while smear microscopy had a mean cost of USD 13.31 with an ABC of USD 6.01. The sensitivity of smear microscopy was 42.9% and its specificity was 99.1%, while the Xpert assay had a sensitivity of 100% and a specificity of 96.7%. Conclusions: The Xpert assay has high accuracy; however, the turnaround time and cost of smear microscopy were lower than those of Xpert.
publishDate 2020
dc.date.issued.fl_str_mv 2020
dc.date.accessioned.fl_str_mv 2024-01-12T22:40:53Z
dc.date.available.fl_str_mv 2024-01-12T22:40:53Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1843/62757
dc.identifier.doi.pt_BR.fl_str_mv 10.1590/0037-8682-0314-2020
dc.identifier.issn.pt_BR.fl_str_mv 16789849
identifier_str_mv 10.1590/0037-8682-0314-2020
16789849
url http://hdl.handle.net/1843/62757
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartof.none.fl_str_mv Revista da Sociedade Brasileira de Medicina Tropical
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eu_rights_str_mv openAccess
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dc.publisher.none.fl_str_mv Universidade Federal de Minas Gerais
dc.publisher.initials.fl_str_mv UFMG
dc.publisher.country.fl_str_mv Brasil
dc.publisher.department.fl_str_mv FAR - DEPARTAMENTO DE FARMÁCIA SOCIAL
MED - DEPARTAMENTO DE CLÍNICA MÉDICA
publisher.none.fl_str_mv Universidade Federal de Minas Gerais
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFMG
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institution UFMG
reponame_str Repositório Institucional da UFMG
collection Repositório Institucional da UFMG
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