Evaluation of the current in the cell membrane for numerical simulations of electroporation

Detalhes bibliográficos
Autor(a) principal: João Francisco Cristeli do Vale
Data de Publicação: 2022
Outros Autores: Jaime Arturo Ramírez
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFMG
Texto Completo: https://doi.org/10.1590/2179-10742022v21i11167
http://hdl.handle.net/1843/62015
http://orcid.org/0000-0002-7114-1527
http://orcid.org/0000-0002-8311-8981
Resumo: This study presents a rigorous numerical analysis of the current in the cell membrane, subjected to a uniform electric field, and its impact in the pore formation. The numerical model considers a single cell composed of uniform membrane and cytoplasm, in a suspension medium. The current in the cell membrane is calculated using two different approaches. The first uses a lumped parameters approach based on the geometry of the pore, while the second describes the flow of ions through the pore considering the interaction with the pore walls as an energy barrier. The formation and growth of the pores is solved using an asymptotic approximation of the Smoluchowski’s equation. The electrical potential induced in the cell membrane, which is coupled with the current in the membrane, is resolved in spherical coordinates using the finite difference method. The two approaches have qualitatively similar results but significant quantitative differences in the number and radii of pores. The ionic flow approach has resulted in the formation of fewer pores and reduced pore growth. Approximately 38,000 fewer pores are created, a 21% difference, and the largest pores are approximately 8nm smaller, a 24% difference. Thus, this approach results in a less conductive membrane and smaller electroporated area.
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spelling 2023-12-14T20:37:35Z2023-12-14T20:37:35Z20222116182https://doi.org/10.1590/2179-10742022v21i111672179-1074http://hdl.handle.net/1843/62015http://orcid.org/0000-0002-7114-1527http://orcid.org/0000-0002-8311-8981This study presents a rigorous numerical analysis of the current in the cell membrane, subjected to a uniform electric field, and its impact in the pore formation. The numerical model considers a single cell composed of uniform membrane and cytoplasm, in a suspension medium. The current in the cell membrane is calculated using two different approaches. The first uses a lumped parameters approach based on the geometry of the pore, while the second describes the flow of ions through the pore considering the interaction with the pore walls as an energy barrier. The formation and growth of the pores is solved using an asymptotic approximation of the Smoluchowski’s equation. The electrical potential induced in the cell membrane, which is coupled with the current in the membrane, is resolved in spherical coordinates using the finite difference method. The two approaches have qualitatively similar results but significant quantitative differences in the number and radii of pores. The ionic flow approach has resulted in the formation of fewer pores and reduced pore growth. Approximately 38,000 fewer pores are created, a 21% difference, and the largest pores are approximately 8nm smaller, a 24% difference. Thus, this approach results in a less conductive membrane and smaller electroporated area.Este estudo apresenta uma análise numérica rigorosa da corrente na membrana celular, submetida a um campo elétrico uniforme, e seu impacto na formação de poros. O modelo numérico considera uma única célula composta por membrana e citoplasma uniformes, em meio de suspensão. A corrente na membrana celular é calculada usando duas abordagens diferentes. O primeiro utiliza uma abordagem de parâmetros concentrados baseada na geometria do poro, enquanto o segundo descreve o fluxo de íons através do poro considerando a interação com as paredes do poro como uma barreira energética. A formação e o crescimento dos poros são resolvidos utilizando uma aproximação assintótica da equação de Smoluchowski. O potencial elétrico induzido na membrana celular, que é acoplado à corrente na membrana, é resolvido em coordenadas esféricas usando o método das diferenças finitas. As duas abordagens apresentam resultados qualitativamente semelhantes, mas diferenças quantitativas significativas no número e nos raios dos poros. A abordagem do fluxo iônico resultou na formação de menos poros e na redução do crescimento de poros. Aproximadamente 38.000 poros a menos são criados, uma diferença de 21%, e os poros maiores são aproximadamente 8 nm menores, uma diferença de 24%. Assim, esta abordagem resulta em uma membrana menos condutora e menor área eletroporada.CNPq - Conselho Nacional de Desenvolvimento Científico e TecnológicoCAPES - Coordenação de Aperfeiçoamento de Pessoal de Nível SuperiorengUniversidade Federal de Minas GeraisUFMGBrasilENG - DEPARTAMENTO DE ENGENHARIA ELÉTRICAJournal of Microwaves, Optoelectronics and Electromagnetic ApplicationsMembrana celularFenômenos eletromagnéticosEletroporaçãoBiological cellElectromagneticsFinite Difference MethodsNumerical simulationEvaluation of the current in the cell membrane for numerical simulations of electroporationAvaliação da corrente na membrana celular para simulações numéricas de eletroporaçãoinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttps://www.scielo.br/j/jmoea/a/3ZRsCwsGZY6SWZRKf8X6yNp/abstract/?lang=en#João Francisco Cristeli do ValeJaime Arturo Ramírezapplication/pdfinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFMGinstname:Universidade Federal de Minas Gerais (UFMG)instacron:UFMGLICENSELicense.txtLicense.txttext/plain; charset=utf-82042https://repositorio.ufmg.br/bitstream/1843/62015/1/License.txtfa505098d172de0bc8864fc1287ffe22MD51ORIGINALEvaluation of the current in the cell membrane for numerical simulations of electroporation.pdfEvaluation of the current in the cell membrane for numerical simulations of electroporation.pdfapplication/pdf1669972https://repositorio.ufmg.br/bitstream/1843/62015/2/Evaluation%20of%20the%20current%20in%20the%20cell%20membrane%20for%20numerical%20simulations%20of%20electroporation.pdf7d6215fac084fbd4bc40e7b8bb897327MD521843/620152023-12-14 17:37:36.034oai:repositorio.ufmg.br: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Repositório de PublicaçõesPUBhttps://repositorio.ufmg.br/oaiopendoar:2023-12-14T20:37:36Repositório Institucional da UFMG - Universidade Federal de Minas Gerais (UFMG)false
dc.title.pt_BR.fl_str_mv Evaluation of the current in the cell membrane for numerical simulations of electroporation
dc.title.alternative.pt_BR.fl_str_mv Avaliação da corrente na membrana celular para simulações numéricas de eletroporação
title Evaluation of the current in the cell membrane for numerical simulations of electroporation
spellingShingle Evaluation of the current in the cell membrane for numerical simulations of electroporation
João Francisco Cristeli do Vale
Biological cell
Electromagnetics
Finite Difference Methods
Numerical simulation
Membrana celular
Fenômenos eletromagnéticos
Eletroporação
title_short Evaluation of the current in the cell membrane for numerical simulations of electroporation
title_full Evaluation of the current in the cell membrane for numerical simulations of electroporation
title_fullStr Evaluation of the current in the cell membrane for numerical simulations of electroporation
title_full_unstemmed Evaluation of the current in the cell membrane for numerical simulations of electroporation
title_sort Evaluation of the current in the cell membrane for numerical simulations of electroporation
author João Francisco Cristeli do Vale
author_facet João Francisco Cristeli do Vale
Jaime Arturo Ramírez
author_role author
author2 Jaime Arturo Ramírez
author2_role author
dc.contributor.author.fl_str_mv João Francisco Cristeli do Vale
Jaime Arturo Ramírez
dc.subject.por.fl_str_mv Biological cell
Electromagnetics
Finite Difference Methods
Numerical simulation
topic Biological cell
Electromagnetics
Finite Difference Methods
Numerical simulation
Membrana celular
Fenômenos eletromagnéticos
Eletroporação
dc.subject.other.pt_BR.fl_str_mv Membrana celular
Fenômenos eletromagnéticos
Eletroporação
description This study presents a rigorous numerical analysis of the current in the cell membrane, subjected to a uniform electric field, and its impact in the pore formation. The numerical model considers a single cell composed of uniform membrane and cytoplasm, in a suspension medium. The current in the cell membrane is calculated using two different approaches. The first uses a lumped parameters approach based on the geometry of the pore, while the second describes the flow of ions through the pore considering the interaction with the pore walls as an energy barrier. The formation and growth of the pores is solved using an asymptotic approximation of the Smoluchowski’s equation. The electrical potential induced in the cell membrane, which is coupled with the current in the membrane, is resolved in spherical coordinates using the finite difference method. The two approaches have qualitatively similar results but significant quantitative differences in the number and radii of pores. The ionic flow approach has resulted in the formation of fewer pores and reduced pore growth. Approximately 38,000 fewer pores are created, a 21% difference, and the largest pores are approximately 8nm smaller, a 24% difference. Thus, this approach results in a less conductive membrane and smaller electroporated area.
publishDate 2022
dc.date.issued.fl_str_mv 2022
dc.date.accessioned.fl_str_mv 2023-12-14T20:37:35Z
dc.date.available.fl_str_mv 2023-12-14T20:37:35Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1843/62015
dc.identifier.doi.pt_BR.fl_str_mv https://doi.org/10.1590/2179-10742022v21i11167
dc.identifier.issn.pt_BR.fl_str_mv 2179-1074
dc.identifier.orcid.pt_BR.fl_str_mv http://orcid.org/0000-0002-7114-1527
http://orcid.org/0000-0002-8311-8981
url https://doi.org/10.1590/2179-10742022v21i11167
http://hdl.handle.net/1843/62015
http://orcid.org/0000-0002-7114-1527
http://orcid.org/0000-0002-8311-8981
identifier_str_mv 2179-1074
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartof.pt_BR.fl_str_mv Journal of Microwaves, Optoelectronics and Electromagnetic Applications
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Minas Gerais
dc.publisher.initials.fl_str_mv UFMG
dc.publisher.country.fl_str_mv Brasil
dc.publisher.department.fl_str_mv ENG - DEPARTAMENTO DE ENGENHARIA ELÉTRICA
publisher.none.fl_str_mv Universidade Federal de Minas Gerais
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFMG
instname:Universidade Federal de Minas Gerais (UFMG)
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instname_str Universidade Federal de Minas Gerais (UFMG)
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