Structural, membrane interaction and biological studies of PS-O1 and LyeTx I-b peptide derivatives

Detalhes bibliográficos
Autor(a) principal: Lucas Raposo Carvalho
Data de Publicação: 2022
Tipo de documento: Tese
Idioma: eng
Título da fonte: Repositório Institucional da UFMG
Texto Completo: http://hdl.handle.net/1843/51378
https://orcid.org/0000-0002-6476-4531
Resumo: Antimicrobial peptides (AMPs) are promising drug candidates when fighting bacterial resistance, being molecules with many mechanisms of action. Furthermore, the skin secretion of anurans and spider poisons are rich sources of AMPs, and phylloseptine PS-O1, alongside LyeTx I-b, are peptides of interest to our research group. Peptide alteration strategies, such as post-translational modifications and residue insertion, aim to improve the biological properties of these drug candidates. As such, in this work, six compounds were synthesized, being two peptides (PS-O1 and R1G2-PS-O1) and two propargylic derivatives ([Pra1 ]PS-O1 and R[Pra]PS-O1) by Fmoc-SPPS and two glucotriazole peptides (PS-O1 GtP and R1A2-PS-O1 GtP) using the CuAAC reaction. Two peptides, LyeTx I-bcys and LyeTx I-bPEG, were synthesized by collaborator Júlio César Moreira Brito. PS-O1 derivatives were synthesized (8.7 to 26.5% yield), purified by RP-HPLC (73.4 to 91.5% yield), with purities ranging from 92% to 98%, and analyzed by MALDI-TOF-MS. Circular dichroism was used to analyze their conformational prefer ences in the presence of TFE/H2O mixtures, SDS and DPC micelles, and POPC and POPC/POPG 3:1 vesicles, indicating α-helical structural motifs starting from specific concentrations for all media except POPC LUVs. The three-dimensional structure of PS-O1, PS-O1 GtP, R1G2-PS-O1, R1A2-PS-O1 GtP, LyeTx I-bcys, and LyeTx I-bPEG was determined by 2D NMR experiments, revealing various α-helical percentages and positions. While the introduction of a glucose unit increased structure formation for PS-O1, an opposite effect was observed for R1G2-PS-O1, being potentially attributed to different helix stabilizing interactions at the N -terminus. A high degree of structural similarity between LyeTx I-bcys and LyeTx I-bPEG was observed. Finally, antifungal biological studies for PS-O1 derivatives show that R1G2-PS-O1 is considerably more active than the other three, supporting structural data obtained by NMR analyses.
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spelling Jarbas Magalhães Resendehttp://lattes.cnpq.br/4995867883627482Jarbas Magalhães ResendeAdolfo Henrique de Moraes SilvaTiago Antônio da Silva BrandãoFábio Ceneviva Lacerda de AlmeidaCláudio Francisco Tormenahttp://lattes.cnpq.br/6047367281104531Lucas Raposo Carvalho2023-03-30T17:20:22Z2023-03-30T17:20:22Z2022-10-26http://hdl.handle.net/1843/51378https://orcid.org/0000-0002-6476-4531Antimicrobial peptides (AMPs) are promising drug candidates when fighting bacterial resistance, being molecules with many mechanisms of action. Furthermore, the skin secretion of anurans and spider poisons are rich sources of AMPs, and phylloseptine PS-O1, alongside LyeTx I-b, are peptides of interest to our research group. Peptide alteration strategies, such as post-translational modifications and residue insertion, aim to improve the biological properties of these drug candidates. As such, in this work, six compounds were synthesized, being two peptides (PS-O1 and R1G2-PS-O1) and two propargylic derivatives ([Pra1 ]PS-O1 and R[Pra]PS-O1) by Fmoc-SPPS and two glucotriazole peptides (PS-O1 GtP and R1A2-PS-O1 GtP) using the CuAAC reaction. Two peptides, LyeTx I-bcys and LyeTx I-bPEG, were synthesized by collaborator Júlio César Moreira Brito. PS-O1 derivatives were synthesized (8.7 to 26.5% yield), purified by RP-HPLC (73.4 to 91.5% yield), with purities ranging from 92% to 98%, and analyzed by MALDI-TOF-MS. Circular dichroism was used to analyze their conformational prefer ences in the presence of TFE/H2O mixtures, SDS and DPC micelles, and POPC and POPC/POPG 3:1 vesicles, indicating α-helical structural motifs starting from specific concentrations for all media except POPC LUVs. The three-dimensional structure of PS-O1, PS-O1 GtP, R1G2-PS-O1, R1A2-PS-O1 GtP, LyeTx I-bcys, and LyeTx I-bPEG was determined by 2D NMR experiments, revealing various α-helical percentages and positions. While the introduction of a glucose unit increased structure formation for PS-O1, an opposite effect was observed for R1G2-PS-O1, being potentially attributed to different helix stabilizing interactions at the N -terminus. A high degree of structural similarity between LyeTx I-bcys and LyeTx I-bPEG was observed. Finally, antifungal biological studies for PS-O1 derivatives show that R1G2-PS-O1 is considerably more active than the other three, supporting structural data obtained by NMR analyses.Peptídeos antimicrobianos (PAMs) são promissores candidatos a fármacos para combater a resistência bacteriana, sendo moléculas com mecanismos de ação diversos. Além disso, a secreção cutânea de anuros e venenos de aranhas são fontes abundantes de PAMs e a filloseptina PS-O1, assim como a LyeTx I-b, são peptídeos de interesse do nosso grupo de pesquisa. Estratégias de alterações de peptídeos, como modificações pós-translacionais e inserção de resíduos visam melhorar propriedades farmacológicas desses potenciais fármacos. Sendo assim, neste trabalho, foram sintetizados seis compostos, dois peptídeos (PS-O1 e R1G2-PS-O1) e dois derivados propargílicos ([Pra1]PS-O1 e R[Pra]PS O1) por Fmoc-SPFS e dois glicotriazol-peptídeos (PS-O1 GtP e R1A2-PS-O1 GtP) por CuAAC. Os derivados LyeTx I-bcys e LyeTx I-bPEG foram sintetizados pelo colaborador Júlio César Moreira Brito. A síntese dos derivados da PS-O1 tiveram rendimentos de síntese entre 8,7 e 26,5% e, de purificação, entre 73,4 e 91,5%, com graus de pureza entre 91 e 98%, verificados por CLAE-FR. Todos os derivados sintetizados foram caracterizados por MALDI-TOF-MS e tiveram suas preferências conformacionais analisadas por dicroísmo circular na presença de misturas TFE:H2O, micelas de SDS e DPC e vesículas de POPC e POPC:POPG 3:1, indicando a formação de estruturas α-helicoidais a partir de determinados valores de concentração para todos os meios exceto LUVs de POPC. A estrutura tridimensional dos peptídeos PS-O1, PS-O1 GtP, R1G2-PS-O1, R1A2-PS-O1 GtP, LyeTx I-bcys e LyeTx I-bPEG foram determinadas por experimentos de RMN, revelando diferentes porcentages e localizações de estruturas α-helicoidais. Observou-se que, enquanto a introdução da unidade glicosídica aumentou a estruturação para a PS-O1, um efeito contrário foi observado para a R1G2-PS-O1, sendo potencialmente atribuído à diferentes interações estabilizantes de hélice próximas à porção N -terminal. Um alto grau de similaridade estrutural entre os peptídeos LyeTx I-bcys e LyeTx I-bPEG foi observado. Por fim, estudos de atividade anti-fúngica para os derivados da PS-O1 mostram que a R1G2-PS-O1 apresentou atividade pronunciadamente superior aos outros, corroborando dados estruturais observados por RMN.CNPq - Conselho Nacional de Desenvolvimento Científico e TecnológicoFAPEMIG - Fundação de Amparo à Pesquisa do Estado de Minas GeraisCAPES - Coordenação de Aperfeiçoamento de Pessoal de Nível SuperiorFINEP - Financiadora de Estudos e Projetos, Financiadora de Estudos e ProjetosOutra AgênciaengUniversidade Federal de Minas GeraisPrograma de Pós-Graduação em QuímicaUFMGBrasilICX - DEPARTAMENTO DE QUÍMICAhttp://creativecommons.org/licenses/by-nc-nd/3.0/pt/info:eu-repo/semantics/openAccessQuímica orgânicaPeptídios – SínteseProdutos de ação antimicrobianaRessonância magnética nuclearArgininaFormação de anéis (Química)Cromatografia liquida de alta eficiênciaTestes biológicosAtividade antifúngicaCitotoxidade de mediação celularAgentes antibacterianosAntimicrobial peptidesPhylloseptinsLyeTx I-bNuclear magnetic resonance - NMR spectroscopyPeptide-membrane interactionsGlucotriazole-peptidesPEGylated peptidesArginineStructural, membrane interaction and biological studies of PS-O1 and LyeTx I-b peptide derivativesEstudos estruturais, de interação com membranas e biológicos de derivados peptídicos da PS-O1 e LyeTx I-binfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisreponame:Repositório Institucional da UFMGinstname:Universidade Federal de Minas Gerais (UFMG)instacron:UFMGLICENSElicense.txtlicense.txttext/plain; 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dc.title.pt_BR.fl_str_mv Structural, membrane interaction and biological studies of PS-O1 and LyeTx I-b peptide derivatives
dc.title.alternative.pt_BR.fl_str_mv Estudos estruturais, de interação com membranas e biológicos de derivados peptídicos da PS-O1 e LyeTx I-b
title Structural, membrane interaction and biological studies of PS-O1 and LyeTx I-b peptide derivatives
spellingShingle Structural, membrane interaction and biological studies of PS-O1 and LyeTx I-b peptide derivatives
Lucas Raposo Carvalho
Antimicrobial peptides
Phylloseptins
LyeTx I-b
Nuclear magnetic resonance - NMR spectroscopy
Peptide-membrane interactions
Glucotriazole-peptides
PEGylated peptides
Arginine
Química orgânica
Peptídios – Síntese
Produtos de ação antimicrobiana
Ressonância magnética nuclear
Arginina
Formação de anéis (Química)
Cromatografia liquida de alta eficiência
Testes biológicos
Atividade antifúngica
Citotoxidade de mediação celular
Agentes antibacterianos
title_short Structural, membrane interaction and biological studies of PS-O1 and LyeTx I-b peptide derivatives
title_full Structural, membrane interaction and biological studies of PS-O1 and LyeTx I-b peptide derivatives
title_fullStr Structural, membrane interaction and biological studies of PS-O1 and LyeTx I-b peptide derivatives
title_full_unstemmed Structural, membrane interaction and biological studies of PS-O1 and LyeTx I-b peptide derivatives
title_sort Structural, membrane interaction and biological studies of PS-O1 and LyeTx I-b peptide derivatives
author Lucas Raposo Carvalho
author_facet Lucas Raposo Carvalho
author_role author
dc.contributor.advisor1.fl_str_mv Jarbas Magalhães Resende
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/4995867883627482
dc.contributor.referee1.fl_str_mv Jarbas Magalhães Resende
dc.contributor.referee2.fl_str_mv Adolfo Henrique de Moraes Silva
dc.contributor.referee3.fl_str_mv Tiago Antônio da Silva Brandão
dc.contributor.referee4.fl_str_mv Fábio Ceneviva Lacerda de Almeida
dc.contributor.referee5.fl_str_mv Cláudio Francisco Tormena
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/6047367281104531
dc.contributor.author.fl_str_mv Lucas Raposo Carvalho
contributor_str_mv Jarbas Magalhães Resende
Jarbas Magalhães Resende
Adolfo Henrique de Moraes Silva
Tiago Antônio da Silva Brandão
Fábio Ceneviva Lacerda de Almeida
Cláudio Francisco Tormena
dc.subject.por.fl_str_mv Antimicrobial peptides
Phylloseptins
LyeTx I-b
Nuclear magnetic resonance - NMR spectroscopy
Peptide-membrane interactions
Glucotriazole-peptides
PEGylated peptides
Arginine
topic Antimicrobial peptides
Phylloseptins
LyeTx I-b
Nuclear magnetic resonance - NMR spectroscopy
Peptide-membrane interactions
Glucotriazole-peptides
PEGylated peptides
Arginine
Química orgânica
Peptídios – Síntese
Produtos de ação antimicrobiana
Ressonância magnética nuclear
Arginina
Formação de anéis (Química)
Cromatografia liquida de alta eficiência
Testes biológicos
Atividade antifúngica
Citotoxidade de mediação celular
Agentes antibacterianos
dc.subject.other.pt_BR.fl_str_mv Química orgânica
Peptídios – Síntese
Produtos de ação antimicrobiana
Ressonância magnética nuclear
Arginina
Formação de anéis (Química)
Cromatografia liquida de alta eficiência
Testes biológicos
Atividade antifúngica
Citotoxidade de mediação celular
Agentes antibacterianos
description Antimicrobial peptides (AMPs) are promising drug candidates when fighting bacterial resistance, being molecules with many mechanisms of action. Furthermore, the skin secretion of anurans and spider poisons are rich sources of AMPs, and phylloseptine PS-O1, alongside LyeTx I-b, are peptides of interest to our research group. Peptide alteration strategies, such as post-translational modifications and residue insertion, aim to improve the biological properties of these drug candidates. As such, in this work, six compounds were synthesized, being two peptides (PS-O1 and R1G2-PS-O1) and two propargylic derivatives ([Pra1 ]PS-O1 and R[Pra]PS-O1) by Fmoc-SPPS and two glucotriazole peptides (PS-O1 GtP and R1A2-PS-O1 GtP) using the CuAAC reaction. Two peptides, LyeTx I-bcys and LyeTx I-bPEG, were synthesized by collaborator Júlio César Moreira Brito. PS-O1 derivatives were synthesized (8.7 to 26.5% yield), purified by RP-HPLC (73.4 to 91.5% yield), with purities ranging from 92% to 98%, and analyzed by MALDI-TOF-MS. Circular dichroism was used to analyze their conformational prefer ences in the presence of TFE/H2O mixtures, SDS and DPC micelles, and POPC and POPC/POPG 3:1 vesicles, indicating α-helical structural motifs starting from specific concentrations for all media except POPC LUVs. The three-dimensional structure of PS-O1, PS-O1 GtP, R1G2-PS-O1, R1A2-PS-O1 GtP, LyeTx I-bcys, and LyeTx I-bPEG was determined by 2D NMR experiments, revealing various α-helical percentages and positions. While the introduction of a glucose unit increased structure formation for PS-O1, an opposite effect was observed for R1G2-PS-O1, being potentially attributed to different helix stabilizing interactions at the N -terminus. A high degree of structural similarity between LyeTx I-bcys and LyeTx I-bPEG was observed. Finally, antifungal biological studies for PS-O1 derivatives show that R1G2-PS-O1 is considerably more active than the other three, supporting structural data obtained by NMR analyses.
publishDate 2022
dc.date.issued.fl_str_mv 2022-10-26
dc.date.accessioned.fl_str_mv 2023-03-30T17:20:22Z
dc.date.available.fl_str_mv 2023-03-30T17:20:22Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1843/51378
dc.identifier.orcid.pt_BR.fl_str_mv https://orcid.org/0000-0002-6476-4531
url http://hdl.handle.net/1843/51378
https://orcid.org/0000-0002-6476-4531
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv http://creativecommons.org/licenses/by-nc-nd/3.0/pt/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-nd/3.0/pt/
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Universidade Federal de Minas Gerais
dc.publisher.program.fl_str_mv Programa de Pós-Graduação em Química
dc.publisher.initials.fl_str_mv UFMG
dc.publisher.country.fl_str_mv Brasil
dc.publisher.department.fl_str_mv ICX - DEPARTAMENTO DE QUÍMICA
publisher.none.fl_str_mv Universidade Federal de Minas Gerais
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFMG
instname:Universidade Federal de Minas Gerais (UFMG)
instacron:UFMG
instname_str Universidade Federal de Minas Gerais (UFMG)
instacron_str UFMG
institution UFMG
reponame_str Repositório Institucional da UFMG
collection Repositório Institucional da UFMG
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