The complex evolutionary history and phylogeography of Caridina typus (Crustacea: Decapoda): long-distance dispersal and cryptic allopatric species

Detalhes bibliográficos
Autor(a) principal: Samuel Chagas Bernardes
Data de Publicação: 2017
Outros Autores: Almir Rogério Pepato, Thomas Von Rintelen, Kristina von Rintelen, Timothy J. Page, Hendrik Freitag, Mark de Bruyn
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFMG
Texto Completo: https://doi.org/10.1038/s41598-017-08494-w
http://hdl.handle.net/1843/56359
https://orcid.org/0000-0001-8350-3727
https://orcid.org/0000-0002-2944-4209
https://orcid.org/0000-0002-6253-3078
https://orcid.org/0000-0003-4167-3570
https://orcid.org/0000-0002-3521-3503
https://orcid.org/0000-0003-1528-9604
Resumo: The evolutionary history of the old, diverse freshwater shrimp genus Caridina is still poorly understood, despite its vast distribution – from Africa to Polynesia. Here, we used nuclear and mitochondrial DNA to infer the phylogeographic and evolutionary history of C. typus, which is one of only four species distributed across the entire range of the genus. Despite this species’ potential for high levels of gene fow, questions have been raised regarding its phylogeographic structure and taxonomic status. We identifed three distinct lineages that likely diverged in the Miocene. Molecular dating and ancestral range reconstructions are congruent with C. typus’ early dispersal to Africa, possibly mediated by the Miocene Indian Ocean Equatorial Jet, followed by back dispersal to Australasia after the Jet’s closure. Furthermore, several diferent species delimitation methods indicate each lineage represents a distinct (cryptic) species, contradicting current morphospecies delimitation of a single C. typus taxon. The evolutionary history of C. typus lineages is complex, in which ancient oceanic current systems and (currently unrecognised) speciation events preceded secondary sympatry of these cryptic species.
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spelling 2023-07-15T00:22:27Z2023-07-15T00:22:27Z2017-08-227https://doi.org/10.1038/s41598-017-08494-w2045-2322http://hdl.handle.net/1843/56359https://orcid.org/0000-0001-8350-3727https://orcid.org/0000-0002-2944-4209https://orcid.org/0000-0002-6253-3078https://orcid.org/0000-0003-4167-3570https://orcid.org/0000-0002-3521-3503https://orcid.org/0000-0003-1528-9604The evolutionary history of the old, diverse freshwater shrimp genus Caridina is still poorly understood, despite its vast distribution – from Africa to Polynesia. Here, we used nuclear and mitochondrial DNA to infer the phylogeographic and evolutionary history of C. typus, which is one of only four species distributed across the entire range of the genus. Despite this species’ potential for high levels of gene fow, questions have been raised regarding its phylogeographic structure and taxonomic status. We identifed three distinct lineages that likely diverged in the Miocene. Molecular dating and ancestral range reconstructions are congruent with C. typus’ early dispersal to Africa, possibly mediated by the Miocene Indian Ocean Equatorial Jet, followed by back dispersal to Australasia after the Jet’s closure. Furthermore, several diferent species delimitation methods indicate each lineage represents a distinct (cryptic) species, contradicting current morphospecies delimitation of a single C. typus taxon. The evolutionary history of C. typus lineages is complex, in which ancient oceanic current systems and (currently unrecognised) speciation events preceded secondary sympatry of these cryptic species.A história evolutiva do antigo e diverso gênero de camarão de água doce Caridina ainda é pouco compreendida, apesar de sua vasta distribuição – da África à Polinésia. Aqui, usamos DNA nuclear e mitocondrial para inferir a história filogeográfica e evolutiva de C. typus, que é uma das apenas quatro espécies distribuídas em toda a distribuição do gênero. Apesar do potencial dessa espécie para altos níveis de fluxo gênico, questões foram levantadas sobre sua estrutura filogeográfica e status taxonômico. Identificamos três linhagens distintas que provavelmente divergiram no Mioceno. A datação molecular e as reconstruções do alcance ancestral são congruentes com a dispersão inicial de C. typus para a África, possivelmente mediada pelo Jato Equatorial do Oceano Índico do Mioceno, seguida pela retrodispersão para a Australásia após o fechamento do Jato. Além disso, vários métodos diferentes de delimitação de espécies indicam que cada linhagem representa uma espécie distinta (críptica), contrariando a atual delimitação de morfoespécies de um único táxon de C. typus. A história evolutiva das linhagens de C. typus é complexa, na qual antigos sistemas de correntes oceânicas e eventos de especiação (atualmente não reconhecidos) precederam a simpatria secundária dessas espécies crípticas.FAPEMIG - Fundação de Amparo à Pesquisa do Estado de Minas GeraisOutra AgênciaengUniversidade Federal de Minas GeraisUFMGBrasilICB - DEPARTAMENTO DE ZOOLOGIAScientific ReportsZoologiaFilogeografiaFilogeniaCamarão de água doceBiogeographyPhylogeneticsSpecies delimitationThe complex evolutionary history and phylogeography of Caridina typus (Crustacea: Decapoda): long-distance dispersal and cryptic allopatric speciesA complexa história evolutiva e filogeografia de Caridina typus (Crustacea: Decapoda): dispersão de longa distância e espécies alopátricas crípticasinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttps://www.nature.com/articles/s41598-017-08494-wSamuel Chagas BernardesAlmir Rogério PepatoThomas Von RintelenKristina von RintelenTimothy J. PageHendrik FreitagMark de Bruynapplication/pdfinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFMGinstname:Universidade Federal de Minas Gerais (UFMG)instacron:UFMGLICENSELicense.txtLicense.txttext/plain; charset=utf-82042https://repositorio.ufmg.br/bitstream/1843/56359/1/License.txtfa505098d172de0bc8864fc1287ffe22MD51ORIGINALThe complex evolutionary history and phylogeography of Caridina typus (Crustacea Decapoda) long-distance dispersal and cryptic allopatric species.pdfThe complex evolutionary history and phylogeography of Caridina typus (Crustacea Decapoda) long-distance dispersal and cryptic allopatric species.pdfapplication/pdf11455822https://repositorio.ufmg.br/bitstream/1843/56359/2/The%20complex%20evolutionary%20history%20and%20phylogeography%20of%20Caridina%20typus%20%28Crustacea%20Decapoda%29%20long-distance%20dispersal%20and%20cryptic%20allopatric%20species.pdf08fcfae83e1734e0a4e1f8754d5c945eMD521843/563592023-07-14 21:22:27.564oai:repositorio.ufmg.br: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Repositório de PublicaçõesPUBhttps://repositorio.ufmg.br/oaiopendoar:2023-07-15T00:22:27Repositório Institucional da UFMG - Universidade Federal de Minas Gerais (UFMG)false
dc.title.pt_BR.fl_str_mv The complex evolutionary history and phylogeography of Caridina typus (Crustacea: Decapoda): long-distance dispersal and cryptic allopatric species
dc.title.alternative.pt_BR.fl_str_mv A complexa história evolutiva e filogeografia de Caridina typus (Crustacea: Decapoda): dispersão de longa distância e espécies alopátricas crípticas
title The complex evolutionary history and phylogeography of Caridina typus (Crustacea: Decapoda): long-distance dispersal and cryptic allopatric species
spellingShingle The complex evolutionary history and phylogeography of Caridina typus (Crustacea: Decapoda): long-distance dispersal and cryptic allopatric species
Samuel Chagas Bernardes
Biogeography
Phylogenetics
Species delimitation
Zoologia
Filogeografia
Filogenia
Camarão de água doce
title_short The complex evolutionary history and phylogeography of Caridina typus (Crustacea: Decapoda): long-distance dispersal and cryptic allopatric species
title_full The complex evolutionary history and phylogeography of Caridina typus (Crustacea: Decapoda): long-distance dispersal and cryptic allopatric species
title_fullStr The complex evolutionary history and phylogeography of Caridina typus (Crustacea: Decapoda): long-distance dispersal and cryptic allopatric species
title_full_unstemmed The complex evolutionary history and phylogeography of Caridina typus (Crustacea: Decapoda): long-distance dispersal and cryptic allopatric species
title_sort The complex evolutionary history and phylogeography of Caridina typus (Crustacea: Decapoda): long-distance dispersal and cryptic allopatric species
author Samuel Chagas Bernardes
author_facet Samuel Chagas Bernardes
Almir Rogério Pepato
Thomas Von Rintelen
Kristina von Rintelen
Timothy J. Page
Hendrik Freitag
Mark de Bruyn
author_role author
author2 Almir Rogério Pepato
Thomas Von Rintelen
Kristina von Rintelen
Timothy J. Page
Hendrik Freitag
Mark de Bruyn
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Samuel Chagas Bernardes
Almir Rogério Pepato
Thomas Von Rintelen
Kristina von Rintelen
Timothy J. Page
Hendrik Freitag
Mark de Bruyn
dc.subject.por.fl_str_mv Biogeography
Phylogenetics
Species delimitation
topic Biogeography
Phylogenetics
Species delimitation
Zoologia
Filogeografia
Filogenia
Camarão de água doce
dc.subject.other.pt_BR.fl_str_mv Zoologia
Filogeografia
Filogenia
Camarão de água doce
description The evolutionary history of the old, diverse freshwater shrimp genus Caridina is still poorly understood, despite its vast distribution – from Africa to Polynesia. Here, we used nuclear and mitochondrial DNA to infer the phylogeographic and evolutionary history of C. typus, which is one of only four species distributed across the entire range of the genus. Despite this species’ potential for high levels of gene fow, questions have been raised regarding its phylogeographic structure and taxonomic status. We identifed three distinct lineages that likely diverged in the Miocene. Molecular dating and ancestral range reconstructions are congruent with C. typus’ early dispersal to Africa, possibly mediated by the Miocene Indian Ocean Equatorial Jet, followed by back dispersal to Australasia after the Jet’s closure. Furthermore, several diferent species delimitation methods indicate each lineage represents a distinct (cryptic) species, contradicting current morphospecies delimitation of a single C. typus taxon. The evolutionary history of C. typus lineages is complex, in which ancient oceanic current systems and (currently unrecognised) speciation events preceded secondary sympatry of these cryptic species.
publishDate 2017
dc.date.issued.fl_str_mv 2017-08-22
dc.date.accessioned.fl_str_mv 2023-07-15T00:22:27Z
dc.date.available.fl_str_mv 2023-07-15T00:22:27Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1843/56359
dc.identifier.doi.pt_BR.fl_str_mv https://doi.org/10.1038/s41598-017-08494-w
dc.identifier.issn.pt_BR.fl_str_mv 2045-2322
dc.identifier.orcid.pt_BR.fl_str_mv https://orcid.org/0000-0001-8350-3727
https://orcid.org/0000-0002-2944-4209
https://orcid.org/0000-0002-6253-3078
https://orcid.org/0000-0003-4167-3570
https://orcid.org/0000-0002-3521-3503
https://orcid.org/0000-0003-1528-9604
url https://doi.org/10.1038/s41598-017-08494-w
http://hdl.handle.net/1843/56359
https://orcid.org/0000-0001-8350-3727
https://orcid.org/0000-0002-2944-4209
https://orcid.org/0000-0002-6253-3078
https://orcid.org/0000-0003-4167-3570
https://orcid.org/0000-0002-3521-3503
https://orcid.org/0000-0003-1528-9604
identifier_str_mv 2045-2322
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartof.pt_BR.fl_str_mv Scientific Reports
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
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dc.publisher.none.fl_str_mv Universidade Federal de Minas Gerais
dc.publisher.initials.fl_str_mv UFMG
dc.publisher.country.fl_str_mv Brasil
dc.publisher.department.fl_str_mv ICB - DEPARTAMENTO DE ZOOLOGIA
publisher.none.fl_str_mv Universidade Federal de Minas Gerais
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFMG
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