Avaliação da Fertilidade na Raça Caracu

Detalhes bibliográficos
Autor(a) principal: Luiz Gustavo Cavalca
Data de Publicação: 2022
Tipo de documento: Tese
Idioma: por
Título da fonte: Repositório Institucional da UFMS
Texto Completo: https://repositorio.ufms.br/handle/123456789/5807
Resumo: Objectives: The objectives were: Chapter 1) To compare the different methods used to assess permanence ability (HP), calculate its heritability, to know if it is a good trait to be selected in caracu cattle. Cap.2) Evaluate the probability of offspring repetition within 14 months (PRC14), calculate its heritability and repeatability. Compare with permanence skill to recommend the best trait to select. Material and methods: The reproductive information of 17568 births from 5555 sows, whose births took place between 2003 and 2020, belonging to the Caracu herd of Fazenda Arinos, located in the municipality of Diamantino, state of Mato Grosso, were used. In addition, another 3558 animals that make up the pedigree of these animals and that will be included in the kinship matrix used in the analysis were included in the analysis. The statistical package SAS (1990) will be used for the formation of files, consistency and descriptive analysis of the data. Permanence ability was evaluated in two ways, the usual HP6/3, where every animal that presented the first offspring in the database up to 40 months of age had a valid phenotype, and those with three offspring registered up to 76 months of age have the manifestation of “success” in the permanence ability characteristic and those who did not have three offspring manifest “failure” in the permanence ability characteristic. In the second form (HP4/2), the number of pups drops to two and the time for permanence drops to 52 months, from having their first calving to 26 months. The other characteristic considered was the probability of calving repetition in up to 14 months (PRC14), a calving interval considered maximum for a cow to repeat calving in a herd management system with a three-month breeding season. In this case, all calved cows manifest a phenotype for each of their offspring, being “success” if the calving interval is less than 14 months and “failure” if this interval is greater than 14 months or this is the last calving interval. their offspring, and every possibility of repeating a birth within 14 months generates a data, whether positive (repeat birth) or negative (not repeated birth). The model used in the analysis of permanence ability included the fixed effects of the group of contemporaries (composed of year and time of birth of the sow), and the linear effect of differences in age of females nested within the group of contemporaries. In addition, direct additive and residual random effects were included, each with its specific variance component. For trait PRC14, we used the fixed effects of contemporary group (consisting of year and time of birth and sex of the calf), the effect of cow age at calving nested within sex, the linear effect of nested calving date differences within the group of contemporaries. there was also the random effect of the cow's permanent environment, since a repeatability model was used for this characteristic. A threshold model was used, in which the hidden underlying scale follows normal distribution with the linear model above that, together with the threshold of manifestation of the characteristic, defines the probability of manifestation of the phenotypes in the observed scale (remained or not, repeated breeds or no). The variance components were estimated by Bayesian inference using Monte Carlo methods based on Markov chains implemented in the thrgibbs1F90 software (Mizstal et al., 2002). Sufficient length chains were used to achieve an effective sample size equal to or greater than 100 independent samples. Analysis Template for HP Yij=C+Gci+ai+eij Analysis model for PRC14 Yij=C+Gci+bi(Ibij-IBi)+f(IVPi)+ai+pi+eij Yij=0nor 1, if Yij<0 or Yij>0 Results: Both traits have low heritability. Conclusions: Even though they are two distinct traits, which presented low and similar heritability, they should be included in selection programs, due to their great importance in the productivity and profitability of the herd. Keywords: Caracu. Stayability. Fertility.
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spelling 2023-04-12T18:41:14Z2023-04-12T18:41:14Z2022https://repositorio.ufms.br/handle/123456789/5807Objectives: The objectives were: Chapter 1) To compare the different methods used to assess permanence ability (HP), calculate its heritability, to know if it is a good trait to be selected in caracu cattle. Cap.2) Evaluate the probability of offspring repetition within 14 months (PRC14), calculate its heritability and repeatability. Compare with permanence skill to recommend the best trait to select. Material and methods: The reproductive information of 17568 births from 5555 sows, whose births took place between 2003 and 2020, belonging to the Caracu herd of Fazenda Arinos, located in the municipality of Diamantino, state of Mato Grosso, were used. In addition, another 3558 animals that make up the pedigree of these animals and that will be included in the kinship matrix used in the analysis were included in the analysis. The statistical package SAS (1990) will be used for the formation of files, consistency and descriptive analysis of the data. Permanence ability was evaluated in two ways, the usual HP6/3, where every animal that presented the first offspring in the database up to 40 months of age had a valid phenotype, and those with three offspring registered up to 76 months of age have the manifestation of “success” in the permanence ability characteristic and those who did not have three offspring manifest “failure” in the permanence ability characteristic. In the second form (HP4/2), the number of pups drops to two and the time for permanence drops to 52 months, from having their first calving to 26 months. The other characteristic considered was the probability of calving repetition in up to 14 months (PRC14), a calving interval considered maximum for a cow to repeat calving in a herd management system with a three-month breeding season. In this case, all calved cows manifest a phenotype for each of their offspring, being “success” if the calving interval is less than 14 months and “failure” if this interval is greater than 14 months or this is the last calving interval. their offspring, and every possibility of repeating a birth within 14 months generates a data, whether positive (repeat birth) or negative (not repeated birth). The model used in the analysis of permanence ability included the fixed effects of the group of contemporaries (composed of year and time of birth of the sow), and the linear effect of differences in age of females nested within the group of contemporaries. In addition, direct additive and residual random effects were included, each with its specific variance component. For trait PRC14, we used the fixed effects of contemporary group (consisting of year and time of birth and sex of the calf), the effect of cow age at calving nested within sex, the linear effect of nested calving date differences within the group of contemporaries. there was also the random effect of the cow's permanent environment, since a repeatability model was used for this characteristic. A threshold model was used, in which the hidden underlying scale follows normal distribution with the linear model above that, together with the threshold of manifestation of the characteristic, defines the probability of manifestation of the phenotypes in the observed scale (remained or not, repeated breeds or no). The variance components were estimated by Bayesian inference using Monte Carlo methods based on Markov chains implemented in the thrgibbs1F90 software (Mizstal et al., 2002). Sufficient length chains were used to achieve an effective sample size equal to or greater than 100 independent samples. Analysis Template for HP Yij=C+Gci+ai+eij Analysis model for PRC14 Yij=C+Gci+bi(Ibij-IBi)+f(IVPi)+ai+pi+eij Yij=0nor 1, if Yij<0 or Yij>0 Results: Both traits have low heritability. Conclusions: Even though they are two distinct traits, which presented low and similar heritability, they should be included in selection programs, due to their great importance in the productivity and profitability of the herd. Keywords: Caracu. Stayability. Fertility.Objetivos: Os objetivos foram: Cap.1) Comparar os diferentes métodos utilizados para avaliar habilidade de permanência (HP), calcular sua herdabilidade, para saber se é uma boa característica a ser selecionada em bovinos da raça caracu. Cap.2) Avaliar a característica probabilidade de repetição de cria em até 14 meses (PRC14), calcular sua herdabilidade e sua repetibilidade. Comparar com a habilidade de permanência, para recomendar a melhor característica a ser selecionada. Material e métodos: Foram utilizadas as informações reprodutivas de 17568 partos de 5555 matrizes, cujos partos ocorreram entre 2003 à 2020, pertencentes ao rebanho Caracu da Fazenda Arinos, localizada no município de Diamantino, estado de Mato Grosso. Além disso, foram incluídos na análise, outros 3558 animais que compõem o pedigree destes animais e que constarão da matriz de parentesco utilizada na análise. Será utilizado o pacote estatístico SAS (1990) para a formação de arquivos, consistência e análise descritiva dos dados. A habilidade de permanência foi avaliada de duas formas sendo a usual HP6/3, onde todo animal que apresentou a primeira cria no banco de dados até os 40 meses teve fenótipo válido, sendo que aquelas com três crias cadastradas até os 76 meses tem a manifestação de “sucesso” na característica habilidade de permanência e aquelas que não tiveram três crias manifestam “falha” na característica habilidade de permanência. Na segunda forma (HP4/2), o número de crias cai para duas e o tempo para permanência cai para 52 meses, desde que tenha seu primeiro parto até os 26 meses. A outra característica considerada foi a probabilidade de repetição de cria em até 14 meses (PRC14), intervalo de partos considerado máximo para uma vaca repetir cria em um sistema de condução do rebanho com estação de monta de três meses. Neste caso, todas as vacas paridas, manifestam um fenótipo para cada uma de suas crias, sendo “sucesso” se o intervalo de partos for inferior a 14 meses e “falha” se este intervalo for superior a 14 meses ou esta for a última de suas crias, sendo que toda possibilidade de repetir um parto em até 14 meses, gera um dado, seja ele positivo (repetiu o parto) ou negativo (não repetiu o parto). O modelo utilizado nas análises da habilidade de permanência incluiu os efeitos fixos de grupo de contemporâneos (composto por ano e época de nascimento da matriz), e o efeito linear das diferenças de idade das fêmeas aninhado dentro do grupo de contemporâneos. Além disso, foram incluídos os efeitos aleatórios aditivo direto e do resíduo, cada um com seu componente de variância específico. Para a característica PRC14 foram utilizados os efeitos fixos de grupo de contemporâneos (composto por ano e época de nascimento e sexo da cria), o efeito de idade da vaca ao parto aninhado dentro de sexo, o efeito linear das diferenças de data do parto aninhado dentro do grupo de contemporâneos. houve também o efeito aleatório de ambiente permanente de vaca, já que foi utilizado um modelo de repetibilidade para esta característica. Fooi utilizado um modelo de limiar, no qual a escala subjacente oculta segue distribuição normal com o modelo linear acima que, juntamente com o limiar de manifestação da característica, define a probabilidade de manifestação dos fenótipos na escala observada (permaneceu ou não, repetiu cria ou não). Os componentes de variância foram estimados por inferência Bayesiana utilizando métodos de Monte Carlo baseados em cadeias de Markov implementados no software thrgibbs1F90 (Mizstal et al., 2002). Foram utilizadas cadeias de tamanho suficiente para atingir um tamanho efetivo da amostra igual ou superior a 100 amostras independentes. Modelo de análise para HP Yij=C+Gci+ai+eij Modelo de análise para PRC14 Yij=C+Gci+bi(Ibij-IBi)+f(IVPi)+ai+pi+eij Yij=0nou 1,se Yij<0 ou Yij>0 Resultados: Ambas as características possuem baixa herdabilidade. Conclusões: Mesmo sendo duas características distintas, que apresentaram baixa e semelhante herdabilidade, estas devem ser incluídas em programas de seleção, devido a sua grande importância na produtividade e rentabilidade do rebanho. Palavras-Chave: Caracu. Habilidade de Permanência. Fertilidade.Fundação Universidade Federal de Mato Grosso do SulUFMSBrasilAvaliaçãofertilidadeRaça Caracu.Avaliação da Fertilidade na Raça Caracuinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisFabio Jose Carvalho FariaLuiz Gustavo Cavalcainfo:eu-repo/semantics/openAccessporreponame:Repositório Institucional da UFMSinstname:Universidade Federal de Mato Grosso do Sul (UFMS)instacron:UFMSORIGINALtese gustavo defesa- corrigida.pdftese gustavo defesa- corrigida.pdfapplication/pdf1519321https://repositorio.ufms.br/bitstream/123456789/5807/-1/tese%20gustavo%20defesa-%20corrigida.pdfe7d8a67462db3e3375d074f3ecd01233MD5-1123456789/58072023-04-12 14:41:16.315oai:repositorio.ufms.br:123456789/5807Repositório InstitucionalPUBhttps://repositorio.ufms.br/oai/requestri.prograd@ufms.bropendoar:21242023-04-12T18:41:16Repositório Institucional da UFMS - Universidade Federal de Mato Grosso do Sul (UFMS)false
dc.title.pt_BR.fl_str_mv Avaliação da Fertilidade na Raça Caracu
title Avaliação da Fertilidade na Raça Caracu
spellingShingle Avaliação da Fertilidade na Raça Caracu
Luiz Gustavo Cavalca
Avaliação
fertilidade
Raça Caracu.
title_short Avaliação da Fertilidade na Raça Caracu
title_full Avaliação da Fertilidade na Raça Caracu
title_fullStr Avaliação da Fertilidade na Raça Caracu
title_full_unstemmed Avaliação da Fertilidade na Raça Caracu
title_sort Avaliação da Fertilidade na Raça Caracu
author Luiz Gustavo Cavalca
author_facet Luiz Gustavo Cavalca
author_role author
dc.contributor.advisor1.fl_str_mv Fabio Jose Carvalho Faria
dc.contributor.author.fl_str_mv Luiz Gustavo Cavalca
contributor_str_mv Fabio Jose Carvalho Faria
dc.subject.por.fl_str_mv Avaliação
fertilidade
Raça Caracu.
topic Avaliação
fertilidade
Raça Caracu.
description Objectives: The objectives were: Chapter 1) To compare the different methods used to assess permanence ability (HP), calculate its heritability, to know if it is a good trait to be selected in caracu cattle. Cap.2) Evaluate the probability of offspring repetition within 14 months (PRC14), calculate its heritability and repeatability. Compare with permanence skill to recommend the best trait to select. Material and methods: The reproductive information of 17568 births from 5555 sows, whose births took place between 2003 and 2020, belonging to the Caracu herd of Fazenda Arinos, located in the municipality of Diamantino, state of Mato Grosso, were used. In addition, another 3558 animals that make up the pedigree of these animals and that will be included in the kinship matrix used in the analysis were included in the analysis. The statistical package SAS (1990) will be used for the formation of files, consistency and descriptive analysis of the data. Permanence ability was evaluated in two ways, the usual HP6/3, where every animal that presented the first offspring in the database up to 40 months of age had a valid phenotype, and those with three offspring registered up to 76 months of age have the manifestation of “success” in the permanence ability characteristic and those who did not have three offspring manifest “failure” in the permanence ability characteristic. In the second form (HP4/2), the number of pups drops to two and the time for permanence drops to 52 months, from having their first calving to 26 months. The other characteristic considered was the probability of calving repetition in up to 14 months (PRC14), a calving interval considered maximum for a cow to repeat calving in a herd management system with a three-month breeding season. In this case, all calved cows manifest a phenotype for each of their offspring, being “success” if the calving interval is less than 14 months and “failure” if this interval is greater than 14 months or this is the last calving interval. their offspring, and every possibility of repeating a birth within 14 months generates a data, whether positive (repeat birth) or negative (not repeated birth). The model used in the analysis of permanence ability included the fixed effects of the group of contemporaries (composed of year and time of birth of the sow), and the linear effect of differences in age of females nested within the group of contemporaries. In addition, direct additive and residual random effects were included, each with its specific variance component. For trait PRC14, we used the fixed effects of contemporary group (consisting of year and time of birth and sex of the calf), the effect of cow age at calving nested within sex, the linear effect of nested calving date differences within the group of contemporaries. there was also the random effect of the cow's permanent environment, since a repeatability model was used for this characteristic. A threshold model was used, in which the hidden underlying scale follows normal distribution with the linear model above that, together with the threshold of manifestation of the characteristic, defines the probability of manifestation of the phenotypes in the observed scale (remained or not, repeated breeds or no). The variance components were estimated by Bayesian inference using Monte Carlo methods based on Markov chains implemented in the thrgibbs1F90 software (Mizstal et al., 2002). Sufficient length chains were used to achieve an effective sample size equal to or greater than 100 independent samples. Analysis Template for HP Yij=C+Gci+ai+eij Analysis model for PRC14 Yij=C+Gci+bi(Ibij-IBi)+f(IVPi)+ai+pi+eij Yij=0nor 1, if Yij<0 or Yij>0 Results: Both traits have low heritability. Conclusions: Even though they are two distinct traits, which presented low and similar heritability, they should be included in selection programs, due to their great importance in the productivity and profitability of the herd. Keywords: Caracu. Stayability. Fertility.
publishDate 2022
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