Caracterização clínico-epidemiológica, molecular e susceptibilidade in vitro aos antifúngicos de isolados clínicos do complexo Cryptococcus neoformans / Cryptococcus gattii em Cuiabá e Várzea Grande - MT

Detalhes bibliográficos
Autor(a) principal: Favalessa, Olívia Cometti
Data de Publicação: 2014
Tipo de documento: Tese
Idioma: por
Título da fonte: Repositório Institucional da UFMT
Texto Completo: http://ri.ufmt.br/handle/1/3333
Resumo: Cryptococcosis is a systemic fungal infection caused by the Cryptococcus species complex, the most commonly isolated species are Cryptococcus neoformans (serotypes A, D and AD) and Cryptococcus gattii (serotypes B and C). are those most frequently affected by C. neoformans serotype A and D. This species are distributed worldwide and is considered an important cause of morbidity and mortality in these patients. Cryptococcus gattii predominantly affects healthy individuals and rarely been reported affecting HIV positive individuals. It occurs endemically in northeastern Brazil. The purpose of this study was to characterize phenotypic and molecular characterization of the Cryptococcus species complex in clinical isolates of HIV-positive and HIV-negative patients attended at the Cuiabá emergency and Várzea Grande University Hospitals of the municipalities of Cuiabá and Várzea Grande, Mato Grosso, and determine the antifungal drug in vitro susceptibility profile. The study was conducted between September 2005 and February 2014. 62 clinical samples of Cryptococcus spp were identified by chemotyping using canavanine-glycine-bromothymol blue agar and confirmed by PCR. The molecular typing was performed by URA5 – RFLP. The susceptibility profile was performed using the reference broth microdilution method, in accordance with CLSI standards guidelines. Among the 62 patients with cryptococcosis, 40 (64,52%) HIV-positive individuals and 22 (35,48%) were found HIV negative. Considering gender, 36 were male and 26 females and the age ranged 4-74 years with a mean of 37.89 years. Clinical isolates, 44 Cryptococcus neoformans VNI, 17 Cryptococcus gattii VGII and one Cryptococcus neoformans VNII. Neurocryptococcosis was predominant clinical manifestation. Among these cases, the most frequent symptoms were headache, fever, vomiting, altered consciousness, and in some cases pulmonary involvement. The in vitro susceptibility was performed for 60 clinical isolates. The 60 isolates C. neoformans and C. gattii showed in vitro susceptibility to the antifungal agents tested. The ranges of minimal inhibitory concentrations (MIC) expressed in µg/mL for C. neoformans VNI were: amphotericin B (0.5 to 1.0), flucytosine (0.5 - 16), fluconazole (0.5 - 16), itraconazole (0.015 – 0.25), and voriconazole (0.03 to 0.25) and C. gattii VGII amphotericin B (0.5 - 1), flucytosine (1-16), fluconazole (1-16), itraconazole (0.03 - 0.5) and voriconazole (0.06 to 0.5).The genotype C. neoformans VNI was predominant in patients with AIDS, and C. gattii VGII was predominant in HIV negative patients. There were no cases of in vitro resistance of these genotypes to the antifungal agents tested. This was the first study reporting molecular, clinical and epidemiological aspects of clinical isolates of the Crytpococcus spp highlighting new features on molecular epidemiology in the State of Mato Grosso.
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spelling Caracterização clínico-epidemiológica, molecular e susceptibilidade in vitro aos antifúngicos de isolados clínicos do complexo Cryptococcus neoformans / Cryptococcus gattii em Cuiabá e Várzea Grande - MT.CNPQ::CIENCIAS DA SAUDE.Cryptococcosis is a systemic fungal infection caused by the Cryptococcus species complex, the most commonly isolated species are Cryptococcus neoformans (serotypes A, D and AD) and Cryptococcus gattii (serotypes B and C). are those most frequently affected by C. neoformans serotype A and D. This species are distributed worldwide and is considered an important cause of morbidity and mortality in these patients. Cryptococcus gattii predominantly affects healthy individuals and rarely been reported affecting HIV positive individuals. It occurs endemically in northeastern Brazil. The purpose of this study was to characterize phenotypic and molecular characterization of the Cryptococcus species complex in clinical isolates of HIV-positive and HIV-negative patients attended at the Cuiabá emergency and Várzea Grande University Hospitals of the municipalities of Cuiabá and Várzea Grande, Mato Grosso, and determine the antifungal drug in vitro susceptibility profile. The study was conducted between September 2005 and February 2014. 62 clinical samples of Cryptococcus spp were identified by chemotyping using canavanine-glycine-bromothymol blue agar and confirmed by PCR. The molecular typing was performed by URA5 – RFLP. The susceptibility profile was performed using the reference broth microdilution method, in accordance with CLSI standards guidelines. Among the 62 patients with cryptococcosis, 40 (64,52%) HIV-positive individuals and 22 (35,48%) were found HIV negative. Considering gender, 36 were male and 26 females and the age ranged 4-74 years with a mean of 37.89 years. Clinical isolates, 44 Cryptococcus neoformans VNI, 17 Cryptococcus gattii VGII and one Cryptococcus neoformans VNII. Neurocryptococcosis was predominant clinical manifestation. Among these cases, the most frequent symptoms were headache, fever, vomiting, altered consciousness, and in some cases pulmonary involvement. The in vitro susceptibility was performed for 60 clinical isolates. The 60 isolates C. neoformans and C. gattii showed in vitro susceptibility to the antifungal agents tested. The ranges of minimal inhibitory concentrations (MIC) expressed in µg/mL for C. neoformans VNI were: amphotericin B (0.5 to 1.0), flucytosine (0.5 - 16), fluconazole (0.5 - 16), itraconazole (0.015 – 0.25), and voriconazole (0.03 to 0.25) and C. gattii VGII amphotericin B (0.5 - 1), flucytosine (1-16), fluconazole (1-16), itraconazole (0.03 - 0.5) and voriconazole (0.06 to 0.5).The genotype C. neoformans VNI was predominant in patients with AIDS, and C. gattii VGII was predominant in HIV negative patients. There were no cases of in vitro resistance of these genotypes to the antifungal agents tested. This was the first study reporting molecular, clinical and epidemiological aspects of clinical isolates of the Crytpococcus spp highlighting new features on molecular epidemiology in the State of Mato Grosso.FAPEMATCriptococose é uma infecção fúngica sistêmica causada por espécies do complexo Cryptococcus sendo as mais isoladas, Cryptococcus neoformans (sorotipo A, D e AD) e Cryptococcus gattii (sorotipo B e C). Pacientes com AIDS são os mais frequentemente acometidos por C. neoformans sorotipo A e D. Esta espécie apresenta distribuição mundial sendo considerada importante causa de morbidade e mortalidade nestes pacientes. Cryptococcus gattii tem afetado predominantemente indivíduos hígidos e raramente, tem sido relatado acometendo indivíduos HIV positivos, ocorrendo endemicamente na região Nordeste do Brasil. A proposta deste trabalho foi realizar a caracterização fenotípica e molecular das espécies do complexo Cryptococcus de isolados clínicos de pacientes HIV (positivos e negativos) provenientes dos hospitais universitários, Pronto Socorro Municipal de Cuiabá e Várzea Grande das cidades de Várzea Grande e Cuiabá - Mato Grosso, e determinar o perfil de suscetibilidade às drogas antifúngicas in vitro. Foram analisados 62 isolados clínicos de Cryptococcus spp no período compreendido entre 09/2005 a 02/2014, as espécies foram identificadas por quimiotipagem em meio canavanina-glicina-azul de bromotimol (CGB) e confirmadas por PCR. A tipagem molecular foi realizada por URA5- RFLP. O perfil de susceptibilidade in vitro foi determinado pelo método de referência de microdiluição em caldo segundo CLSI. Dentre os 62 pacientes com criptococose, foram encontrados 40 (64,52%) indivíduos HIV positivos e 22 (35,48%) HIV negativos, sendo a neurocriptococose a manifestação clínica mais frequente. Considerando o sexo, 36 pertenciam ao sexo masculino e 26 ao feminino; a faixa etária variou de 4 a 74 anos com média de 37,89 anos. Dos isolados clínicos obtidos, 44 Cryptococcus neoformans VNI, 17 Cryptococcus gattii VGII e um Cryptococcus neoformans VNII. A neurocriptococose foi a forma clínica predominante tanto nos pacientes HIV positivos quanto negativos. Dentre estes casos, os sinais e sintomas mais frequentes foram: cefaleia, febre, vômitos, alteração de consciência e em alguns casos comprometimento pulmonar. A susceptibilidade in vitro foi realizada para 60 dos 62 isolados clínicos de Cryptococcus spp, e foi verificado que todos os 60 isolados demonstraram ser susceptíveis in vitro aos cinco antifúngicos testados. As faixas intervalares das concentrações inibitórias mínimas expressas em µg/mL para C. neoformans VNI foram: anfotericina B (0,5 - 1,0), flucitosina (0.5 - 16), fluconazol (0.5 - 16), itraconazol (0.015 – 0.25) e voriconazol (0,03 - 0,25, e para C. gattii VGII anfotericina B (0,5 – 1), flucitosina (1 - 16), fluconazol (1 - 16), itraconazol (0.03 – 0.5) e voriconazol (0,06 - 0,5). O genótipo C. neoformans VNI predominou em pacientes com AIDS emquanto que C. gattii em pacientes soronegativos para o HIV. Não houveram casos de resistência in vitro destes genótipos frente aos antifúngicos testados. Este foi o primeiro trabalho realizado no Estado de Mato Grosso relatando a caracterização clinico-epidemiológica e molecular de isolados clínicos de Crytpococcus spp evidenciando novos aspectos novos dados sobre a epidemiologia molecular.Universidade Federal de Mato GrossoBrasilFaculdade de Medicina (FM)UFMT CUC - CuiabáPrograma de Pós-Graduação em Ciências da SaúdeHahn, Rosane Christinehttp://lattes.cnpq.br/5133908054482037Hahn, Rosane Christine783.744.807-34http://lattes.cnpq.br/5133908054482037Nakazato, Luciano638.389.071-91http://lattes.cnpq.br/3898850578198054783.744.807-34Dutra, Valéria501.674.720-20http://lattes.cnpq.br/4478191386305454Scroferneker, Maria Lucia168.139.010-87http://lattes.cnpq.br/7872136823235638Chang, Marilene Rodrigues290.226.811-49http://lattes.cnpq.br/0781878501103357Favalessa, Olívia Cometti2022-06-10T19:08:52Z2014-11-032022-06-10T19:08:52Z2014-09-19info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisFAVALESSA, Olívia Cometti. Caracterização clínico-epidemiológica, molecular e susceptibilidade in vitro aos antifúngicos de isolados clínicos do complexo Cryptococcus neoformans / Cryptococcus gattii em Cuiabá e Várzea Grande – MT. 2014. 96 f. Tese (Doutorado em Ciências da Saúde) - Universidade Federal de Mato Grosso, Faculdade de Medicina, Cuiabá, 2014.http://ri.ufmt.br/handle/1/3333porinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFMTinstname:Universidade Federal de Mato Grosso (UFMT)instacron:UFMT2022-06-17T07:02:30Zoai:localhost:1/3333Repositório InstitucionalPUBhttp://ri.ufmt.br/oai/requestjordanbiblio@gmail.comopendoar:2022-06-17T07:02:30Repositório Institucional da UFMT - Universidade Federal de Mato Grosso (UFMT)false
dc.title.none.fl_str_mv Caracterização clínico-epidemiológica, molecular e susceptibilidade in vitro aos antifúngicos de isolados clínicos do complexo Cryptococcus neoformans / Cryptococcus gattii em Cuiabá e Várzea Grande - MT
title Caracterização clínico-epidemiológica, molecular e susceptibilidade in vitro aos antifúngicos de isolados clínicos do complexo Cryptococcus neoformans / Cryptococcus gattii em Cuiabá e Várzea Grande - MT
spellingShingle Caracterização clínico-epidemiológica, molecular e susceptibilidade in vitro aos antifúngicos de isolados clínicos do complexo Cryptococcus neoformans / Cryptococcus gattii em Cuiabá e Várzea Grande - MT
Favalessa, Olívia Cometti
.
CNPQ::CIENCIAS DA SAUDE
.
title_short Caracterização clínico-epidemiológica, molecular e susceptibilidade in vitro aos antifúngicos de isolados clínicos do complexo Cryptococcus neoformans / Cryptococcus gattii em Cuiabá e Várzea Grande - MT
title_full Caracterização clínico-epidemiológica, molecular e susceptibilidade in vitro aos antifúngicos de isolados clínicos do complexo Cryptococcus neoformans / Cryptococcus gattii em Cuiabá e Várzea Grande - MT
title_fullStr Caracterização clínico-epidemiológica, molecular e susceptibilidade in vitro aos antifúngicos de isolados clínicos do complexo Cryptococcus neoformans / Cryptococcus gattii em Cuiabá e Várzea Grande - MT
title_full_unstemmed Caracterização clínico-epidemiológica, molecular e susceptibilidade in vitro aos antifúngicos de isolados clínicos do complexo Cryptococcus neoformans / Cryptococcus gattii em Cuiabá e Várzea Grande - MT
title_sort Caracterização clínico-epidemiológica, molecular e susceptibilidade in vitro aos antifúngicos de isolados clínicos do complexo Cryptococcus neoformans / Cryptococcus gattii em Cuiabá e Várzea Grande - MT
author Favalessa, Olívia Cometti
author_facet Favalessa, Olívia Cometti
author_role author
dc.contributor.none.fl_str_mv Hahn, Rosane Christine
http://lattes.cnpq.br/5133908054482037
Hahn, Rosane Christine
783.744.807-34
http://lattes.cnpq.br/5133908054482037
Nakazato, Luciano
638.389.071-91
http://lattes.cnpq.br/3898850578198054
783.744.807-34
Dutra, Valéria
501.674.720-20
http://lattes.cnpq.br/4478191386305454
Scroferneker, Maria Lucia
168.139.010-87
http://lattes.cnpq.br/7872136823235638
Chang, Marilene Rodrigues
290.226.811-49
http://lattes.cnpq.br/0781878501103357
dc.contributor.author.fl_str_mv Favalessa, Olívia Cometti
dc.subject.por.fl_str_mv .
CNPQ::CIENCIAS DA SAUDE
.
topic .
CNPQ::CIENCIAS DA SAUDE
.
description Cryptococcosis is a systemic fungal infection caused by the Cryptococcus species complex, the most commonly isolated species are Cryptococcus neoformans (serotypes A, D and AD) and Cryptococcus gattii (serotypes B and C). are those most frequently affected by C. neoformans serotype A and D. This species are distributed worldwide and is considered an important cause of morbidity and mortality in these patients. Cryptococcus gattii predominantly affects healthy individuals and rarely been reported affecting HIV positive individuals. It occurs endemically in northeastern Brazil. The purpose of this study was to characterize phenotypic and molecular characterization of the Cryptococcus species complex in clinical isolates of HIV-positive and HIV-negative patients attended at the Cuiabá emergency and Várzea Grande University Hospitals of the municipalities of Cuiabá and Várzea Grande, Mato Grosso, and determine the antifungal drug in vitro susceptibility profile. The study was conducted between September 2005 and February 2014. 62 clinical samples of Cryptococcus spp were identified by chemotyping using canavanine-glycine-bromothymol blue agar and confirmed by PCR. The molecular typing was performed by URA5 – RFLP. The susceptibility profile was performed using the reference broth microdilution method, in accordance with CLSI standards guidelines. Among the 62 patients with cryptococcosis, 40 (64,52%) HIV-positive individuals and 22 (35,48%) were found HIV negative. Considering gender, 36 were male and 26 females and the age ranged 4-74 years with a mean of 37.89 years. Clinical isolates, 44 Cryptococcus neoformans VNI, 17 Cryptococcus gattii VGII and one Cryptococcus neoformans VNII. Neurocryptococcosis was predominant clinical manifestation. Among these cases, the most frequent symptoms were headache, fever, vomiting, altered consciousness, and in some cases pulmonary involvement. The in vitro susceptibility was performed for 60 clinical isolates. The 60 isolates C. neoformans and C. gattii showed in vitro susceptibility to the antifungal agents tested. The ranges of minimal inhibitory concentrations (MIC) expressed in µg/mL for C. neoformans VNI were: amphotericin B (0.5 to 1.0), flucytosine (0.5 - 16), fluconazole (0.5 - 16), itraconazole (0.015 – 0.25), and voriconazole (0.03 to 0.25) and C. gattii VGII amphotericin B (0.5 - 1), flucytosine (1-16), fluconazole (1-16), itraconazole (0.03 - 0.5) and voriconazole (0.06 to 0.5).The genotype C. neoformans VNI was predominant in patients with AIDS, and C. gattii VGII was predominant in HIV negative patients. There were no cases of in vitro resistance of these genotypes to the antifungal agents tested. This was the first study reporting molecular, clinical and epidemiological aspects of clinical isolates of the Crytpococcus spp highlighting new features on molecular epidemiology in the State of Mato Grosso.
publishDate 2014
dc.date.none.fl_str_mv 2014-11-03
2014-09-19
2022-06-10T19:08:52Z
2022-06-10T19:08:52Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv FAVALESSA, Olívia Cometti. Caracterização clínico-epidemiológica, molecular e susceptibilidade in vitro aos antifúngicos de isolados clínicos do complexo Cryptococcus neoformans / Cryptococcus gattii em Cuiabá e Várzea Grande – MT. 2014. 96 f. Tese (Doutorado em Ciências da Saúde) - Universidade Federal de Mato Grosso, Faculdade de Medicina, Cuiabá, 2014.
http://ri.ufmt.br/handle/1/3333
identifier_str_mv FAVALESSA, Olívia Cometti. Caracterização clínico-epidemiológica, molecular e susceptibilidade in vitro aos antifúngicos de isolados clínicos do complexo Cryptococcus neoformans / Cryptococcus gattii em Cuiabá e Várzea Grande – MT. 2014. 96 f. Tese (Doutorado em Ciências da Saúde) - Universidade Federal de Mato Grosso, Faculdade de Medicina, Cuiabá, 2014.
url http://ri.ufmt.br/handle/1/3333
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Universidade Federal de Mato Grosso
Brasil
Faculdade de Medicina (FM)
UFMT CUC - Cuiabá
Programa de Pós-Graduação em Ciências da Saúde
publisher.none.fl_str_mv Universidade Federal de Mato Grosso
Brasil
Faculdade de Medicina (FM)
UFMT CUC - Cuiabá
Programa de Pós-Graduação em Ciências da Saúde
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFMT
instname:Universidade Federal de Mato Grosso (UFMT)
instacron:UFMT
instname_str Universidade Federal de Mato Grosso (UFMT)
instacron_str UFMT
institution UFMT
reponame_str Repositório Institucional da UFMT
collection Repositório Institucional da UFMT
repository.name.fl_str_mv Repositório Institucional da UFMT - Universidade Federal de Mato Grosso (UFMT)
repository.mail.fl_str_mv jordanbiblio@gmail.com
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