Dissection of schistosome tissues under LC–MS compatible preservative conditions for quantitative proteomics.
Autor(a) principal: | |
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Data de Publicação: | 2023 |
Outros Autores: | , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UFOP |
Texto Completo: | http://www.repositorio.ufop.br/jspui/handle/123456789/17940 https://doi.org/10.1002/rcm.9523 |
Resumo: | Schistosomes are blood flukes with specialised tissues and organs, each one playing a pivotal role in perpetuating the parasite life cycle. Herein, we describe a detailed methodology for preserving the proteome of adult Schistosoma mansoni worms during manual dissection for enrichment of tissues associated with the parasite's alimentary tract. We provide step-by-step directions for specimen storage and dissection while in preservative solution, tissue homogenisation, protein extraction and digestion using a methodology fully compatible with downstream quantitative liquid chromatography– mass spectrometry analysis. Our methodology uses label-free and QconCAT-based absolute quantification for detection of S. mansoni oesophageal gland products proposed as vaccine candidates. Through stabilisation of the proteome and minimising sample degradation during dissection our approach has allowed us to access the hidden proteome of target tissues not readily available from total lysates because of their small volume. This protocol can be replicated or adapted to other Schistosoma species lacking quantitative proteomics characterisation of specialised tissues for discovery of proteins with potential diagnostic and therapeutic utility. |
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Dissection of schistosome tissues under LC–MS compatible preservative conditions for quantitative proteomics.Schistosomes are blood flukes with specialised tissues and organs, each one playing a pivotal role in perpetuating the parasite life cycle. Herein, we describe a detailed methodology for preserving the proteome of adult Schistosoma mansoni worms during manual dissection for enrichment of tissues associated with the parasite's alimentary tract. We provide step-by-step directions for specimen storage and dissection while in preservative solution, tissue homogenisation, protein extraction and digestion using a methodology fully compatible with downstream quantitative liquid chromatography– mass spectrometry analysis. Our methodology uses label-free and QconCAT-based absolute quantification for detection of S. mansoni oesophageal gland products proposed as vaccine candidates. Through stabilisation of the proteome and minimising sample degradation during dissection our approach has allowed us to access the hidden proteome of target tissues not readily available from total lysates because of their small volume. This protocol can be replicated or adapted to other Schistosoma species lacking quantitative proteomics characterisation of specialised tissues for discovery of proteins with potential diagnostic and therapeutic utility.2023-12-14T21:03:44Z2023-12-14T21:03:44Z2023info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfNEVES, L. X. et al. Dissection of schistosome tissues under LC–MS compatible preservative conditions for quantitative proteomics. Rapid Communications in Mass Spectrometry, artigo e9523, 2023. Disponível em: <https://analyticalsciencejournals.onlinelibrary.wiley.com/doi/10.1002/rcm.9523>. Acesso em: 01 ago. 2023.1097-0231http://www.repositorio.ufop.br/jspui/handle/123456789/17940https://doi.org/10.1002/rcm.9523This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. Fonte: PDF do artigo.info:eu-repo/semantics/openAccessNeves, Leandro XavierWilson, R. AlanBrownridge, PhilipHolman, Stephen W.Harman, Victoria Margaret ElizabethEyers, Claire E.Beynon, Robert J.Borges, William de Castroengreponame:Repositório Institucional da UFOPinstname:Universidade Federal de Ouro Preto (UFOP)instacron:UFOP2023-12-14T21:03:53Zoai:repositorio.ufop.br:123456789/17940Repositório InstitucionalPUBhttp://www.repositorio.ufop.br/oai/requestrepositorio@ufop.edu.bropendoar:32332023-12-14T21:03:53Repositório Institucional da UFOP - Universidade Federal de Ouro Preto (UFOP)false |
dc.title.none.fl_str_mv |
Dissection of schistosome tissues under LC–MS compatible preservative conditions for quantitative proteomics. |
title |
Dissection of schistosome tissues under LC–MS compatible preservative conditions for quantitative proteomics. |
spellingShingle |
Dissection of schistosome tissues under LC–MS compatible preservative conditions for quantitative proteomics. Neves, Leandro Xavier |
title_short |
Dissection of schistosome tissues under LC–MS compatible preservative conditions for quantitative proteomics. |
title_full |
Dissection of schistosome tissues under LC–MS compatible preservative conditions for quantitative proteomics. |
title_fullStr |
Dissection of schistosome tissues under LC–MS compatible preservative conditions for quantitative proteomics. |
title_full_unstemmed |
Dissection of schistosome tissues under LC–MS compatible preservative conditions for quantitative proteomics. |
title_sort |
Dissection of schistosome tissues under LC–MS compatible preservative conditions for quantitative proteomics. |
author |
Neves, Leandro Xavier |
author_facet |
Neves, Leandro Xavier Wilson, R. Alan Brownridge, Philip Holman, Stephen W. Harman, Victoria Margaret Elizabeth Eyers, Claire E. Beynon, Robert J. Borges, William de Castro |
author_role |
author |
author2 |
Wilson, R. Alan Brownridge, Philip Holman, Stephen W. Harman, Victoria Margaret Elizabeth Eyers, Claire E. Beynon, Robert J. Borges, William de Castro |
author2_role |
author author author author author author author |
dc.contributor.author.fl_str_mv |
Neves, Leandro Xavier Wilson, R. Alan Brownridge, Philip Holman, Stephen W. Harman, Victoria Margaret Elizabeth Eyers, Claire E. Beynon, Robert J. Borges, William de Castro |
description |
Schistosomes are blood flukes with specialised tissues and organs, each one playing a pivotal role in perpetuating the parasite life cycle. Herein, we describe a detailed methodology for preserving the proteome of adult Schistosoma mansoni worms during manual dissection for enrichment of tissues associated with the parasite's alimentary tract. We provide step-by-step directions for specimen storage and dissection while in preservative solution, tissue homogenisation, protein extraction and digestion using a methodology fully compatible with downstream quantitative liquid chromatography– mass spectrometry analysis. Our methodology uses label-free and QconCAT-based absolute quantification for detection of S. mansoni oesophageal gland products proposed as vaccine candidates. Through stabilisation of the proteome and minimising sample degradation during dissection our approach has allowed us to access the hidden proteome of target tissues not readily available from total lysates because of their small volume. This protocol can be replicated or adapted to other Schistosoma species lacking quantitative proteomics characterisation of specialised tissues for discovery of proteins with potential diagnostic and therapeutic utility. |
publishDate |
2023 |
dc.date.none.fl_str_mv |
2023-12-14T21:03:44Z 2023-12-14T21:03:44Z 2023 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
NEVES, L. X. et al. Dissection of schistosome tissues under LC–MS compatible preservative conditions for quantitative proteomics. Rapid Communications in Mass Spectrometry, artigo e9523, 2023. Disponível em: <https://analyticalsciencejournals.onlinelibrary.wiley.com/doi/10.1002/rcm.9523>. Acesso em: 01 ago. 2023. 1097-0231 http://www.repositorio.ufop.br/jspui/handle/123456789/17940 https://doi.org/10.1002/rcm.9523 |
identifier_str_mv |
NEVES, L. X. et al. Dissection of schistosome tissues under LC–MS compatible preservative conditions for quantitative proteomics. Rapid Communications in Mass Spectrometry, artigo e9523, 2023. Disponível em: <https://analyticalsciencejournals.onlinelibrary.wiley.com/doi/10.1002/rcm.9523>. Acesso em: 01 ago. 2023. 1097-0231 |
url |
http://www.repositorio.ufop.br/jspui/handle/123456789/17940 https://doi.org/10.1002/rcm.9523 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da UFOP instname:Universidade Federal de Ouro Preto (UFOP) instacron:UFOP |
instname_str |
Universidade Federal de Ouro Preto (UFOP) |
instacron_str |
UFOP |
institution |
UFOP |
reponame_str |
Repositório Institucional da UFOP |
collection |
Repositório Institucional da UFOP |
repository.name.fl_str_mv |
Repositório Institucional da UFOP - Universidade Federal de Ouro Preto (UFOP) |
repository.mail.fl_str_mv |
repositorio@ufop.edu.br |
_version_ |
1813002865211342848 |