Experimental steering of electron microscopy studies using prior X-ray computed tomography.

Detalhes bibliográficos
Autor(a) principal: Starborg, Tobias
Data de Publicação: 2019
Outros Autores: O'Sullivan, James, Carneiro, Cláudia Martins, Behnsen, Julia, Else, Kathryn, Grencis, Richard, Withers, Philip John
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFOP
Texto Completo: http://www.repositorio.ufop.br/handle/123456789/12175
https://doi.org/10.1016/j.ultramic.2019.03.002
Resumo: Transmission electron microscopy (TEM) and scanning electron microscopy (SEM) can provide unrivalled high-resolution images of specific features and volumes of interest. However, the regions interrogated are typically very small, and sample preparation is both time-consuming and destructive. Here we consider how prior X-ray micro-computed tomography (microCT) presents an opportunity to increase the efficiency of electron microscopy in biology. We demonstrate how it can be used to; select the most promising samples and target site-specific locations; provide a wider context of the location being interrogated (multiscale correlative imaging); guide sample preparation and 3D imaging schemes; as well as quantify the effects of destructive sample preparation and staining procedures. We present a workflow utilising open source software in which microCT can be used either broadly, or precisely, to experimentally steer and inform subsequent electron microscopy studies. As automated sample registration procedures are developed to enable correlative microscopy, experimental steering by prior CT could be beneficially routinely incorporated into many experimental workflows.
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spelling Starborg, TobiasO'Sullivan, JamesCarneiro, Cláudia MartinsBehnsen, JuliaElse, KathrynGrencis, RichardWithers, Philip John2020-05-08T18:51:14Z2020-05-08T18:51:14Z2019STARBORG, T. et al. Experimental steering of electron microscopy studies using prior X-ray computed tomography. Ultramicroscopy, v. 201, p. 58-67, jun. 2019. Disponível em: <https://www.sciencedirect.com/science/article/pii/S0304399118304443>. Acesso em: 10 fev. 2020.0304-3991http://www.repositorio.ufop.br/handle/123456789/12175https://doi.org/10.1016/j.ultramic.2019.03.002Transmission electron microscopy (TEM) and scanning electron microscopy (SEM) can provide unrivalled high-resolution images of specific features and volumes of interest. However, the regions interrogated are typically very small, and sample preparation is both time-consuming and destructive. Here we consider how prior X-ray micro-computed tomography (microCT) presents an opportunity to increase the efficiency of electron microscopy in biology. We demonstrate how it can be used to; select the most promising samples and target site-specific locations; provide a wider context of the location being interrogated (multiscale correlative imaging); guide sample preparation and 3D imaging schemes; as well as quantify the effects of destructive sample preparation and staining procedures. We present a workflow utilising open source software in which microCT can be used either broadly, or precisely, to experimentally steer and inform subsequent electron microscopy studies. As automated sample registration procedures are developed to enable correlative microscopy, experimental steering by prior CT could be beneficially routinely incorporated into many experimental workflows.This is an open access article under the CC BY license (http://creativecommons.org/licenses/BY/4.0/). Fonte: o próprio artigo.info:eu-repo/semantics/openAccessUltramicrotomyMultiscale imagingPre-screeningScanning electron microscopyExperimental steering of electron microscopy studies using prior X-ray computed tomography.info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleengreponame:Repositório Institucional da UFOPinstname:Universidade Federal de Ouro Preto (UFOP)instacron:UFOPLICENSElicense.txtlicense.txttext/plain; charset=utf-8924http://www.repositorio.ufop.br/bitstream/123456789/12175/2/license.txt62604f8d955274beb56c80ce1ee5dcaeMD52ORIGINALARTIGO_ExperimentalSteeringElectron.pdfARTIGO_ExperimentalSteeringElectron.pdfapplication/pdf3774143http://www.repositorio.ufop.br/bitstream/123456789/12175/1/ARTIGO_ExperimentalSteeringElectron.pdffa5625a664dbac6febb796867e133ac9MD51123456789/121752020-05-08 14:51:14.253oai:localhost: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ório InstitucionalPUBhttp://www.repositorio.ufop.br/oai/requestrepositorio@ufop.edu.bropendoar:32332020-05-08T18:51:14Repositório Institucional da UFOP - Universidade Federal de Ouro Preto (UFOP)false
dc.title.pt_BR.fl_str_mv Experimental steering of electron microscopy studies using prior X-ray computed tomography.
title Experimental steering of electron microscopy studies using prior X-ray computed tomography.
spellingShingle Experimental steering of electron microscopy studies using prior X-ray computed tomography.
Starborg, Tobias
Ultramicrotomy
Multiscale imaging
Pre-screening
Scanning electron microscopy
title_short Experimental steering of electron microscopy studies using prior X-ray computed tomography.
title_full Experimental steering of electron microscopy studies using prior X-ray computed tomography.
title_fullStr Experimental steering of electron microscopy studies using prior X-ray computed tomography.
title_full_unstemmed Experimental steering of electron microscopy studies using prior X-ray computed tomography.
title_sort Experimental steering of electron microscopy studies using prior X-ray computed tomography.
author Starborg, Tobias
author_facet Starborg, Tobias
O'Sullivan, James
Carneiro, Cláudia Martins
Behnsen, Julia
Else, Kathryn
Grencis, Richard
Withers, Philip John
author_role author
author2 O'Sullivan, James
Carneiro, Cláudia Martins
Behnsen, Julia
Else, Kathryn
Grencis, Richard
Withers, Philip John
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Starborg, Tobias
O'Sullivan, James
Carneiro, Cláudia Martins
Behnsen, Julia
Else, Kathryn
Grencis, Richard
Withers, Philip John
dc.subject.por.fl_str_mv Ultramicrotomy
Multiscale imaging
Pre-screening
Scanning electron microscopy
topic Ultramicrotomy
Multiscale imaging
Pre-screening
Scanning electron microscopy
description Transmission electron microscopy (TEM) and scanning electron microscopy (SEM) can provide unrivalled high-resolution images of specific features and volumes of interest. However, the regions interrogated are typically very small, and sample preparation is both time-consuming and destructive. Here we consider how prior X-ray micro-computed tomography (microCT) presents an opportunity to increase the efficiency of electron microscopy in biology. We demonstrate how it can be used to; select the most promising samples and target site-specific locations; provide a wider context of the location being interrogated (multiscale correlative imaging); guide sample preparation and 3D imaging schemes; as well as quantify the effects of destructive sample preparation and staining procedures. We present a workflow utilising open source software in which microCT can be used either broadly, or precisely, to experimentally steer and inform subsequent electron microscopy studies. As automated sample registration procedures are developed to enable correlative microscopy, experimental steering by prior CT could be beneficially routinely incorporated into many experimental workflows.
publishDate 2019
dc.date.issued.fl_str_mv 2019
dc.date.accessioned.fl_str_mv 2020-05-08T18:51:14Z
dc.date.available.fl_str_mv 2020-05-08T18:51:14Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.citation.fl_str_mv STARBORG, T. et al. Experimental steering of electron microscopy studies using prior X-ray computed tomography. Ultramicroscopy, v. 201, p. 58-67, jun. 2019. Disponível em: <https://www.sciencedirect.com/science/article/pii/S0304399118304443>. Acesso em: 10 fev. 2020.
dc.identifier.uri.fl_str_mv http://www.repositorio.ufop.br/handle/123456789/12175
dc.identifier.issn.none.fl_str_mv 0304-3991
dc.identifier.doi.pt_BR.fl_str_mv https://doi.org/10.1016/j.ultramic.2019.03.002
identifier_str_mv STARBORG, T. et al. Experimental steering of electron microscopy studies using prior X-ray computed tomography. Ultramicroscopy, v. 201, p. 58-67, jun. 2019. Disponível em: <https://www.sciencedirect.com/science/article/pii/S0304399118304443>. Acesso em: 10 fev. 2020.
0304-3991
url http://www.repositorio.ufop.br/handle/123456789/12175
https://doi.org/10.1016/j.ultramic.2019.03.002
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