Genetic characterisation of populations of the critically endangered Goliath grouper (Epinephelus itajara, Serranidae) from the Northern Brazilian coast through analyses of mtDNA

Detalhes bibliográficos
Autor(a) principal: OLIVEIRA, Gláucia Caroline Silva de
Data de Publicação: 2008
Outros Autores: RÊGO, Péricles Sena do, SCHNEIDER, Horacio, SAMPAIO, Maria Iracilda da Cunha, SOUZA, Marcelo Nazareno Vallinoto de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFPA
Texto Completo: http://www.repositorio.ufpa.br:8080/jspui/handle/2011/2191
Resumo: The Goliath grouper (Epinephelus itajara) is one of the most endangered species of fish of the subfamily Epinephelinae. Slow to develop and mature, and dependent on mangrove habitats for breeding, the species also suffers intense harvesting, which has reduced drastically in numbers in many areas. To contribute to the understanding of the characteristics of E. itajara populations, we conducted a molecular genetics study of the species, focusing on populations from the Northern Brazilian coast. The mtDNA control region (D-loop) of 116 individuals from five localities (Bragança, Ajuruteua, Parnaíba, Fortaleza and Natal) was analysed, and a sequence of 499 base pairs identified. Analyses of the sequences indicated that genetic variability was generally lower in E. itajara than in other endangered species of the genus. AMOVA found no significant grouping structure among the populations. Nested Clade Analysis revealed a significant association between genetic variability and geographic distribution among only three populations (Ajuruteua, Parnaíba and Natal). Genetic diversity was higher in populations from the Amazon region, which may be related to the better conservation of mangrove habitats in this area. Therefore, the present study could be used for the implementation of conservation and management measures in order to protect and consolidate these populations.
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spelling 2011-05-18T19:55:33Z2011-05-18T19:55:33Z2008SILVA-OLIVEIRA, Gláucia C. et al. Genetic characterisation of populations of the critically endangered Goliath grouper (Epinephelus itajara, Serranidae) from the Northern Brazilian coast through analyses of mtDNA. Genetics and Molecular Biology, São Paulo, v. 31, n. 4, p. 988-995, 2008. Disponível em: <http://www.scielo.br/pdf/gmb/v31n4/gmb-31-4-aop5.pdf>. Acesso em: 24 mar. 2011. <http://dx.doi.org/10.1590/S1415-47572008005000016>.1415-4757http://www.repositorio.ufpa.br:8080/jspui/handle/2011/2191The Goliath grouper (Epinephelus itajara) is one of the most endangered species of fish of the subfamily Epinephelinae. Slow to develop and mature, and dependent on mangrove habitats for breeding, the species also suffers intense harvesting, which has reduced drastically in numbers in many areas. To contribute to the understanding of the characteristics of E. itajara populations, we conducted a molecular genetics study of the species, focusing on populations from the Northern Brazilian coast. The mtDNA control region (D-loop) of 116 individuals from five localities (Bragança, Ajuruteua, Parnaíba, Fortaleza and Natal) was analysed, and a sequence of 499 base pairs identified. Analyses of the sequences indicated that genetic variability was generally lower in E. itajara than in other endangered species of the genus. AMOVA found no significant grouping structure among the populations. Nested Clade Analysis revealed a significant association between genetic variability and geographic distribution among only three populations (Ajuruteua, Parnaíba and Natal). Genetic diversity was higher in populations from the Amazon region, which may be related to the better conservation of mangrove habitats in this area. Therefore, the present study could be used for the implementation of conservation and management measures in order to protect and consolidate these populations.engPeixeGenética de populaçõesGenética molecularFilogeografiaSerranidaeBrasil - PaísRegião Norte - BrasilRegião Nordeste - BrasilGenetic characterisation of populations of the critically endangered Goliath grouper (Epinephelus itajara, Serranidae) from the Northern Brazilian coast through analyses of mtDNAinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleOLIVEIRA, Gláucia Caroline Silva deRÊGO, Péricles Sena doSCHNEIDER, HoracioSAMPAIO, Maria Iracilda da CunhaSOUZA, Marcelo Nazareno Vallinoto deinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFPAinstname:Universidade Federal do Pará (UFPA)instacron:UFPAORIGINALArtigo_GeneticCharacterisationPopulations.pdfArtigo_GeneticCharacterisationPopulations.pdfapplication/pdf172643http://repositorio.ufpa.br/oai/bitstream/2011/2191/1/Artigo_GeneticCharacterisationPopulations.pdf2665d454d7032dd8bcd80fd98d8c395dMD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748http://repositorio.ufpa.br/oai/bitstream/2011/2191/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52CC-LICENSElicense_urllicense_urltext/plain; charset=utf-849http://repositorio.ufpa.br/oai/bitstream/2011/2191/3/license_urlfd26723f8d7edacdb29e3f03465c3b03MD53license_textlicense_texttext/html; charset=utf-820904http://repositorio.ufpa.br/oai/bitstream/2011/2191/4/license_texte09bf99e64678e4285abf3ef3e05412dMD54license_rdflicense_rdfapplication/rdf+xml; charset=utf-823422http://repositorio.ufpa.br/oai/bitstream/2011/2191/5/license_rdfb145eda3d84bdc4f56b389c0ab98d368MD55TEXTArtigo_GeneticCharacterisationPopulations.pdf.txtArtigo_GeneticCharacterisationPopulations.pdf.txtExtracted texttext/plain28848http://repositorio.ufpa.br/oai/bitstream/2011/2191/6/Artigo_GeneticCharacterisationPopulations.pdf.txtdd4cf9c8c1baf3b9bb96e924596fda30MD562011/21912017-10-16 11:29:51.194oai:repositorio.ufpa.br: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Repositório InstitucionalPUBhttp://repositorio.ufpa.br/oai/requestriufpabc@ufpa.bropendoar:21232017-10-16T14:29:51Repositório Institucional da UFPA - Universidade Federal do Pará (UFPA)false
dc.title.pt_BR.fl_str_mv Genetic characterisation of populations of the critically endangered Goliath grouper (Epinephelus itajara, Serranidae) from the Northern Brazilian coast through analyses of mtDNA
title Genetic characterisation of populations of the critically endangered Goliath grouper (Epinephelus itajara, Serranidae) from the Northern Brazilian coast through analyses of mtDNA
spellingShingle Genetic characterisation of populations of the critically endangered Goliath grouper (Epinephelus itajara, Serranidae) from the Northern Brazilian coast through analyses of mtDNA
OLIVEIRA, Gláucia Caroline Silva de
Peixe
Genética de populações
Genética molecular
Filogeografia
Serranidae
Brasil - País
Região Norte - Brasil
Região Nordeste - Brasil
title_short Genetic characterisation of populations of the critically endangered Goliath grouper (Epinephelus itajara, Serranidae) from the Northern Brazilian coast through analyses of mtDNA
title_full Genetic characterisation of populations of the critically endangered Goliath grouper (Epinephelus itajara, Serranidae) from the Northern Brazilian coast through analyses of mtDNA
title_fullStr Genetic characterisation of populations of the critically endangered Goliath grouper (Epinephelus itajara, Serranidae) from the Northern Brazilian coast through analyses of mtDNA
title_full_unstemmed Genetic characterisation of populations of the critically endangered Goliath grouper (Epinephelus itajara, Serranidae) from the Northern Brazilian coast through analyses of mtDNA
title_sort Genetic characterisation of populations of the critically endangered Goliath grouper (Epinephelus itajara, Serranidae) from the Northern Brazilian coast through analyses of mtDNA
author OLIVEIRA, Gláucia Caroline Silva de
author_facet OLIVEIRA, Gláucia Caroline Silva de
RÊGO, Péricles Sena do
SCHNEIDER, Horacio
SAMPAIO, Maria Iracilda da Cunha
SOUZA, Marcelo Nazareno Vallinoto de
author_role author
author2 RÊGO, Péricles Sena do
SCHNEIDER, Horacio
SAMPAIO, Maria Iracilda da Cunha
SOUZA, Marcelo Nazareno Vallinoto de
author2_role author
author
author
author
dc.contributor.author.fl_str_mv OLIVEIRA, Gláucia Caroline Silva de
RÊGO, Péricles Sena do
SCHNEIDER, Horacio
SAMPAIO, Maria Iracilda da Cunha
SOUZA, Marcelo Nazareno Vallinoto de
dc.subject.por.fl_str_mv Peixe
Genética de populações
Genética molecular
Filogeografia
Serranidae
Brasil - País
Região Norte - Brasil
Região Nordeste - Brasil
topic Peixe
Genética de populações
Genética molecular
Filogeografia
Serranidae
Brasil - País
Região Norte - Brasil
Região Nordeste - Brasil
description The Goliath grouper (Epinephelus itajara) is one of the most endangered species of fish of the subfamily Epinephelinae. Slow to develop and mature, and dependent on mangrove habitats for breeding, the species also suffers intense harvesting, which has reduced drastically in numbers in many areas. To contribute to the understanding of the characteristics of E. itajara populations, we conducted a molecular genetics study of the species, focusing on populations from the Northern Brazilian coast. The mtDNA control region (D-loop) of 116 individuals from five localities (Bragança, Ajuruteua, Parnaíba, Fortaleza and Natal) was analysed, and a sequence of 499 base pairs identified. Analyses of the sequences indicated that genetic variability was generally lower in E. itajara than in other endangered species of the genus. AMOVA found no significant grouping structure among the populations. Nested Clade Analysis revealed a significant association between genetic variability and geographic distribution among only three populations (Ajuruteua, Parnaíba and Natal). Genetic diversity was higher in populations from the Amazon region, which may be related to the better conservation of mangrove habitats in this area. Therefore, the present study could be used for the implementation of conservation and management measures in order to protect and consolidate these populations.
publishDate 2008
dc.date.issued.fl_str_mv 2008
dc.date.accessioned.fl_str_mv 2011-05-18T19:55:33Z
dc.date.available.fl_str_mv 2011-05-18T19:55:33Z
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dc.identifier.citation.fl_str_mv SILVA-OLIVEIRA, Gláucia C. et al. Genetic characterisation of populations of the critically endangered Goliath grouper (Epinephelus itajara, Serranidae) from the Northern Brazilian coast through analyses of mtDNA. Genetics and Molecular Biology, São Paulo, v. 31, n. 4, p. 988-995, 2008. Disponível em: <http://www.scielo.br/pdf/gmb/v31n4/gmb-31-4-aop5.pdf>. Acesso em: 24 mar. 2011. <http://dx.doi.org/10.1590/S1415-47572008005000016>.
dc.identifier.uri.fl_str_mv http://www.repositorio.ufpa.br:8080/jspui/handle/2011/2191
dc.identifier.issn.none.fl_str_mv 1415-4757
identifier_str_mv SILVA-OLIVEIRA, Gláucia C. et al. Genetic characterisation of populations of the critically endangered Goliath grouper (Epinephelus itajara, Serranidae) from the Northern Brazilian coast through analyses of mtDNA. Genetics and Molecular Biology, São Paulo, v. 31, n. 4, p. 988-995, 2008. Disponível em: <http://www.scielo.br/pdf/gmb/v31n4/gmb-31-4-aop5.pdf>. Acesso em: 24 mar. 2011. <http://dx.doi.org/10.1590/S1415-47572008005000016>.
1415-4757
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