Allele frequency distributions of six hypervariable loci (D1S80, APOB, D4S43, vW1, F13A and DYS19) in two African-Brazilian communities from the Amazon region

Detalhes bibliográficos
Autor(a) principal: VALLINOTO, Izaura Maria Vieira Cayres
Data de Publicação: 2003
Outros Autores: VALLINOTO, Antonio Carlos Rosário, VALENTE, Cristina Maria Duarte, GUERREIRO, João Farias
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFPA
Texto Completo: http://repositorio.ufpa.br/jspui/handle/2011/3639
Resumo: The allele frequency distributions of three VNTR (D1S80, APOB and D4S43) and three STR (vW1, F13A1 and DYS19) loci were investigated in two Afro-Brazilian populations from the Amazon: Curiau and Pacoval. Exact tests for population differentiation revealed significant differences in allele frequency between populations only for the D1S80 and APOB loci. A statistically significant deviation from the Hardy-Weinberg equilibrium was observed only in the D1S80 locus of the Pacoval sample. A neighbor-joining tree was constructed based on DA genetic distances of allele frequencies in four Afro-Brazilian populations from the Amazon (Pacoval, Curiau, Trombetas, and Cametá), along with those from Congo, Cameroon, Brazilian Amerindians, and Europeans. This analysis revealed the usefulness of these Amp-FLPs for population studies - African and African-derived populations were closely grouped, and clearly separated from Amerindians and Europeans. Estimates of admixture components based on the gene identity method revealed the prevalence of the African component in both populations studied, amounting to 51% in Pacoval, and to 43% in Curiau. The Amerindian component was also important in both populations (37% in Pacoval, and 24% in Curiau). The European component reached 33% in Curiau.
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spelling 2013-04-05T15:00:58Z2013-04-05T15:00:58Z2003VALLINOTO, Izaura Maria Vieira Cayres, et al. Allele frequency distributions of six hypervariable loci (D1S80, APOB, D4S43, vW1, F13A and DYS19) in two African-Brazilian communities from the Amazon region. Genetics and Molecular Biology, São Paulo, v. 26, n. 3, p. 235-240, 2003. Disponível em: <http://www.scielo.br/pdf/gmb/v26n3/a03v26n3.pdf>. Acesso em: 04 abr. 2013. <http://dx.doi.org/10.1590/S1415-47572003000300003>.1678-46851415-4757http://repositorio.ufpa.br/jspui/handle/2011/3639The allele frequency distributions of three VNTR (D1S80, APOB and D4S43) and three STR (vW1, F13A1 and DYS19) loci were investigated in two Afro-Brazilian populations from the Amazon: Curiau and Pacoval. Exact tests for population differentiation revealed significant differences in allele frequency between populations only for the D1S80 and APOB loci. A statistically significant deviation from the Hardy-Weinberg equilibrium was observed only in the D1S80 locus of the Pacoval sample. A neighbor-joining tree was constructed based on DA genetic distances of allele frequencies in four Afro-Brazilian populations from the Amazon (Pacoval, Curiau, Trombetas, and Cametá), along with those from Congo, Cameroon, Brazilian Amerindians, and Europeans. This analysis revealed the usefulness of these Amp-FLPs for population studies - African and African-derived populations were closely grouped, and clearly separated from Amerindians and Europeans. Estimates of admixture components based on the gene identity method revealed the prevalence of the African component in both populations studied, amounting to 51% in Pacoval, and to 43% in Curiau. The Amerindian component was also important in both populations (37% in Pacoval, and 24% in Curiau). 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dc.title.pt_BR.fl_str_mv Allele frequency distributions of six hypervariable loci (D1S80, APOB, D4S43, vW1, F13A and DYS19) in two African-Brazilian communities from the Amazon region
title Allele frequency distributions of six hypervariable loci (D1S80, APOB, D4S43, vW1, F13A and DYS19) in two African-Brazilian communities from the Amazon region
spellingShingle Allele frequency distributions of six hypervariable loci (D1S80, APOB, D4S43, vW1, F13A and DYS19) in two African-Brazilian communities from the Amazon region
VALLINOTO, Izaura Maria Vieira Cayres
Polimorfismo genético
DNA
Negro (Raça)
Quilombolas
Amapá - Estado
Pará - Estado
Amazônia brasileira
title_short Allele frequency distributions of six hypervariable loci (D1S80, APOB, D4S43, vW1, F13A and DYS19) in two African-Brazilian communities from the Amazon region
title_full Allele frequency distributions of six hypervariable loci (D1S80, APOB, D4S43, vW1, F13A and DYS19) in two African-Brazilian communities from the Amazon region
title_fullStr Allele frequency distributions of six hypervariable loci (D1S80, APOB, D4S43, vW1, F13A and DYS19) in two African-Brazilian communities from the Amazon region
title_full_unstemmed Allele frequency distributions of six hypervariable loci (D1S80, APOB, D4S43, vW1, F13A and DYS19) in two African-Brazilian communities from the Amazon region
title_sort Allele frequency distributions of six hypervariable loci (D1S80, APOB, D4S43, vW1, F13A and DYS19) in two African-Brazilian communities from the Amazon region
author VALLINOTO, Izaura Maria Vieira Cayres
author_facet VALLINOTO, Izaura Maria Vieira Cayres
VALLINOTO, Antonio Carlos Rosário
VALENTE, Cristina Maria Duarte
GUERREIRO, João Farias
author_role author
author2 VALLINOTO, Antonio Carlos Rosário
VALENTE, Cristina Maria Duarte
GUERREIRO, João Farias
author2_role author
author
author
dc.contributor.author.fl_str_mv VALLINOTO, Izaura Maria Vieira Cayres
VALLINOTO, Antonio Carlos Rosário
VALENTE, Cristina Maria Duarte
GUERREIRO, João Farias
dc.subject.por.fl_str_mv Polimorfismo genético
DNA
Negro (Raça)
Quilombolas
Amapá - Estado
Pará - Estado
Amazônia brasileira
topic Polimorfismo genético
DNA
Negro (Raça)
Quilombolas
Amapá - Estado
Pará - Estado
Amazônia brasileira
description The allele frequency distributions of three VNTR (D1S80, APOB and D4S43) and three STR (vW1, F13A1 and DYS19) loci were investigated in two Afro-Brazilian populations from the Amazon: Curiau and Pacoval. Exact tests for population differentiation revealed significant differences in allele frequency between populations only for the D1S80 and APOB loci. A statistically significant deviation from the Hardy-Weinberg equilibrium was observed only in the D1S80 locus of the Pacoval sample. A neighbor-joining tree was constructed based on DA genetic distances of allele frequencies in four Afro-Brazilian populations from the Amazon (Pacoval, Curiau, Trombetas, and Cametá), along with those from Congo, Cameroon, Brazilian Amerindians, and Europeans. This analysis revealed the usefulness of these Amp-FLPs for population studies - African and African-derived populations were closely grouped, and clearly separated from Amerindians and Europeans. Estimates of admixture components based on the gene identity method revealed the prevalence of the African component in both populations studied, amounting to 51% in Pacoval, and to 43% in Curiau. The Amerindian component was also important in both populations (37% in Pacoval, and 24% in Curiau). The European component reached 33% in Curiau.
publishDate 2003
dc.date.issued.fl_str_mv 2003
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dc.identifier.citation.fl_str_mv VALLINOTO, Izaura Maria Vieira Cayres, et al. Allele frequency distributions of six hypervariable loci (D1S80, APOB, D4S43, vW1, F13A and DYS19) in two African-Brazilian communities from the Amazon region. Genetics and Molecular Biology, São Paulo, v. 26, n. 3, p. 235-240, 2003. Disponível em: <http://www.scielo.br/pdf/gmb/v26n3/a03v26n3.pdf>. Acesso em: 04 abr. 2013. <http://dx.doi.org/10.1590/S1415-47572003000300003>.
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identifier_str_mv VALLINOTO, Izaura Maria Vieira Cayres, et al. Allele frequency distributions of six hypervariable loci (D1S80, APOB, D4S43, vW1, F13A and DYS19) in two African-Brazilian communities from the Amazon region. Genetics and Molecular Biology, São Paulo, v. 26, n. 3, p. 235-240, 2003. Disponível em: <http://www.scielo.br/pdf/gmb/v26n3/a03v26n3.pdf>. Acesso em: 04 abr. 2013. <http://dx.doi.org/10.1590/S1415-47572003000300003>.
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