Utilização do kit DNA IQ™ system na extração de dna por lise diferencial em amostras coletadas de vítimas de crime sexual

Detalhes bibliográficos
Autor(a) principal: Bastos, Gisleyde Valério
Data de Publicação: 2018
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Biblioteca Digital de Teses e Dissertações da UFPB
Texto Completo: https://repositorio.ufpb.br/jspui/handle/123456789/15327
Resumo: Forensic samples from cases of sexual crime are often characterized by an unbalanced mixture between the victim's epithelial cells and sperm cells of the offender. DNA extraction by organic differential lysis is still the methodology routinely used to process the separation of male and female DNA in these samples, based on the resistance of the nuclear membrane of the sperm cells to certain reagents. However the technique is extremely time consuming and uses toxic organic solvents such as phenol and chloroform and modifications in this protocol has been a challenge for the forensic laboratories in the world. This study propose the use of DNA extraction kit DNA IQ™ System (Promega) with magnetic particles to eliminate some drawbacks of the standard technique. To perform a comparative analysis between the current use technique and the proposed, 50 samples of sexual crimes were submitted to the same analysis conditions by the two methodologies, resulting in 100 extraction products non-sperm fraction (NSF) and 100 sperm fraction (SF) results. Samples were quantified by real-time PCR using the Plexor HY® System kit (Promega) to evaluate the quantity and quality of amplified autosomal and Y chromosome DNA. 86% of the sperm fractions (SF) from the extraction using the DNA IQ™ System kit presented higher amount of amplified DNA autosomal compared to the standard differential extraction. With respect to Y chromosome DNA, 66% of the samples extracted using the commercial kit technique offered higher amounts of amplified DNA as compared to the standard technique. Statistical analyzes were performed using GraphPad Prism® v.6.0 software and the Wilcoxon test showed that the differences were considered statistically significant with p < 0.0001. The research demonstrated that the technique using the DNA IQ™ System kit is more efficient than the organic differential technique in all analyzed parameters, providing the elimination of toxic solvents, guaranteeing greater security for the forensic analyst, faster execution of the extraction and favorable quantity and quality of recovered DNA. Therefore, its implementation is indicated as an alternative method in forensic laboratories to analyze samples of sexual crime.
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spelling Utilização do kit DNA IQ™ system na extração de dna por lise diferencial em amostras coletadas de vítimas de crime sexualCrime sexualExtração diferencialPartículas magnéticasDNA IQ™ SystemSexual crimeDifferential extractionMagnetic particlesAmostras forenses - Crime sexualCrime sexual - Kit DNA IQPrática forense - Amostras - Crime sexualCNPQ::CIENCIAS BIOLOGICAS::BIOLOGIA GERALForensic samples from cases of sexual crime are often characterized by an unbalanced mixture between the victim's epithelial cells and sperm cells of the offender. DNA extraction by organic differential lysis is still the methodology routinely used to process the separation of male and female DNA in these samples, based on the resistance of the nuclear membrane of the sperm cells to certain reagents. However the technique is extremely time consuming and uses toxic organic solvents such as phenol and chloroform and modifications in this protocol has been a challenge for the forensic laboratories in the world. This study propose the use of DNA extraction kit DNA IQ™ System (Promega) with magnetic particles to eliminate some drawbacks of the standard technique. To perform a comparative analysis between the current use technique and the proposed, 50 samples of sexual crimes were submitted to the same analysis conditions by the two methodologies, resulting in 100 extraction products non-sperm fraction (NSF) and 100 sperm fraction (SF) results. Samples were quantified by real-time PCR using the Plexor HY® System kit (Promega) to evaluate the quantity and quality of amplified autosomal and Y chromosome DNA. 86% of the sperm fractions (SF) from the extraction using the DNA IQ™ System kit presented higher amount of amplified DNA autosomal compared to the standard differential extraction. With respect to Y chromosome DNA, 66% of the samples extracted using the commercial kit technique offered higher amounts of amplified DNA as compared to the standard technique. Statistical analyzes were performed using GraphPad Prism® v.6.0 software and the Wilcoxon test showed that the differences were considered statistically significant with p < 0.0001. The research demonstrated that the technique using the DNA IQ™ System kit is more efficient than the organic differential technique in all analyzed parameters, providing the elimination of toxic solvents, guaranteeing greater security for the forensic analyst, faster execution of the extraction and favorable quantity and quality of recovered DNA. Therefore, its implementation is indicated as an alternative method in forensic laboratories to analyze samples of sexual crime.NenhumaAs amostras forenses decorrentes de casos de crime sexual caracterizam-se, muitas vezes, por uma mistura desequilibrada entre células epiteliais da vítima e espermatozoides do agressor. A extração de DNA por lise diferencial orgânica ainda é a metodologia rotineiramente utilizada para processar a separação de DNA masculino e feminino nestas amostras, baseada na resistência da membrana nuclear dos espermatozoides a determinados reagentes. Entretanto a técnica é extremamente morosa e utiliza solventes orgânicos tóxicos como o fenol e o clorofórmio. Modificações neste protocolo tem sido um desafio para os laboratórios forenses no mundo. O presente estudo propôs a utilização do kit de extração DNA IQ™ System(Promega) com partículas magnéticas para eliminação de alguns inconvenientes da técnica padrão. Para realizar uma análise comparativa entre a técnica de uso corrente e a proposta, 50 amostras de crimes sexuais foram submetidas às mesmas condições de análise pelas duas metodologias, resultando em 100 produtos de extração de fração não espermática (FNE) e 100 de fração espermática (FE). As amostras foram quantificadas por PCR em tempo real utilizando o kit Plexor HY® System (Promega) para avaliar a quantidade e a qualidade de DNA autossômico e de cromossomo Y recuperados. Das amostras de frações espermáticas (FE) analisadas utilizando o kit DNA IQ™ System 86 % apresentaram maior quantidade de DNA autossômico quantificado em comparação à extração diferencial padrão. Com relação ao DNA de cromossomo Y, 66 % das amostras extraídas utilizando a técnica com o kit comercial ofereceram maior quantidade de DNA quando comparadas com a técnica padrão. As análises estatísticas foram realizadas utilizando o software GraphPad Prism® v.6.0. e o teste de Wilcoxon mostrou que as diferenças foram consideradas estatisticamente significativas com o valor de p < 0,0001. A presente pesquisa demonstrou que a técnica utilizando o kit DNA IQ™ System é mais eficiente que a técnica diferencial orgânica em todos os parâmetros analisados proporcionando a eliminação de solventes tóxicos, garantindo maior segurança ao analista forense, maior rapidez de execução da extração e quantidade e qualidade favorável de DNA recuperado. Portanto, sua implementação é indicada como método alternativo nos laboratórios forenses para análise de amostras de crime sexual.Universidade Federal da ParaíbaBrasilBiologia Celular e MolecularPrograma de Pós-Graduação em Biologia Celular e MolecularUFPBDelatorre, Pliniohttp://lattes.cnpq.br/7961149719224268Lima, Eleonidas Mourahttp://lattes.cnpq.br/5494251269749692Bastos, Gisleyde Valério2019-08-21T12:18:04Z2019-02-132019-08-21T12:18:04Z2018-12-11info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesishttps://repositorio.ufpb.br/jspui/handle/123456789/15327porAttribution-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nd/3.0/br/info:eu-repo/semantics/openAccessreponame:Biblioteca Digital de Teses e Dissertações da UFPBinstname:Universidade Federal da Paraíba (UFPB)instacron:UFPB2019-08-21T12:18:04Zoai:repositorio.ufpb.br:123456789/15327Biblioteca Digital de Teses e Dissertaçõeshttps://repositorio.ufpb.br/PUBhttp://tede.biblioteca.ufpb.br:8080/oai/requestdiretoria@ufpb.br|| diretoria@ufpb.bropendoar:2019-08-21T12:18:04Biblioteca Digital de Teses e Dissertações da UFPB - Universidade Federal da Paraíba (UFPB)false
dc.title.none.fl_str_mv Utilização do kit DNA IQ™ system na extração de dna por lise diferencial em amostras coletadas de vítimas de crime sexual
title Utilização do kit DNA IQ™ system na extração de dna por lise diferencial em amostras coletadas de vítimas de crime sexual
spellingShingle Utilização do kit DNA IQ™ system na extração de dna por lise diferencial em amostras coletadas de vítimas de crime sexual
Bastos, Gisleyde Valério
Crime sexual
Extração diferencial
Partículas magnéticas
DNA IQ™ System
Sexual crime
Differential extraction
Magnetic particles
Amostras forenses - Crime sexual
Crime sexual - Kit DNA IQ
Prática forense - Amostras - Crime sexual
CNPQ::CIENCIAS BIOLOGICAS::BIOLOGIA GERAL
title_short Utilização do kit DNA IQ™ system na extração de dna por lise diferencial em amostras coletadas de vítimas de crime sexual
title_full Utilização do kit DNA IQ™ system na extração de dna por lise diferencial em amostras coletadas de vítimas de crime sexual
title_fullStr Utilização do kit DNA IQ™ system na extração de dna por lise diferencial em amostras coletadas de vítimas de crime sexual
title_full_unstemmed Utilização do kit DNA IQ™ system na extração de dna por lise diferencial em amostras coletadas de vítimas de crime sexual
title_sort Utilização do kit DNA IQ™ system na extração de dna por lise diferencial em amostras coletadas de vítimas de crime sexual
author Bastos, Gisleyde Valério
author_facet Bastos, Gisleyde Valério
author_role author
dc.contributor.none.fl_str_mv Delatorre, Plinio
http://lattes.cnpq.br/7961149719224268
Lima, Eleonidas Moura
http://lattes.cnpq.br/5494251269749692
dc.contributor.author.fl_str_mv Bastos, Gisleyde Valério
dc.subject.por.fl_str_mv Crime sexual
Extração diferencial
Partículas magnéticas
DNA IQ™ System
Sexual crime
Differential extraction
Magnetic particles
Amostras forenses - Crime sexual
Crime sexual - Kit DNA IQ
Prática forense - Amostras - Crime sexual
CNPQ::CIENCIAS BIOLOGICAS::BIOLOGIA GERAL
topic Crime sexual
Extração diferencial
Partículas magnéticas
DNA IQ™ System
Sexual crime
Differential extraction
Magnetic particles
Amostras forenses - Crime sexual
Crime sexual - Kit DNA IQ
Prática forense - Amostras - Crime sexual
CNPQ::CIENCIAS BIOLOGICAS::BIOLOGIA GERAL
description Forensic samples from cases of sexual crime are often characterized by an unbalanced mixture between the victim's epithelial cells and sperm cells of the offender. DNA extraction by organic differential lysis is still the methodology routinely used to process the separation of male and female DNA in these samples, based on the resistance of the nuclear membrane of the sperm cells to certain reagents. However the technique is extremely time consuming and uses toxic organic solvents such as phenol and chloroform and modifications in this protocol has been a challenge for the forensic laboratories in the world. This study propose the use of DNA extraction kit DNA IQ™ System (Promega) with magnetic particles to eliminate some drawbacks of the standard technique. To perform a comparative analysis between the current use technique and the proposed, 50 samples of sexual crimes were submitted to the same analysis conditions by the two methodologies, resulting in 100 extraction products non-sperm fraction (NSF) and 100 sperm fraction (SF) results. Samples were quantified by real-time PCR using the Plexor HY® System kit (Promega) to evaluate the quantity and quality of amplified autosomal and Y chromosome DNA. 86% of the sperm fractions (SF) from the extraction using the DNA IQ™ System kit presented higher amount of amplified DNA autosomal compared to the standard differential extraction. With respect to Y chromosome DNA, 66% of the samples extracted using the commercial kit technique offered higher amounts of amplified DNA as compared to the standard technique. Statistical analyzes were performed using GraphPad Prism® v.6.0 software and the Wilcoxon test showed that the differences were considered statistically significant with p < 0.0001. The research demonstrated that the technique using the DNA IQ™ System kit is more efficient than the organic differential technique in all analyzed parameters, providing the elimination of toxic solvents, guaranteeing greater security for the forensic analyst, faster execution of the extraction and favorable quantity and quality of recovered DNA. Therefore, its implementation is indicated as an alternative method in forensic laboratories to analyze samples of sexual crime.
publishDate 2018
dc.date.none.fl_str_mv 2018-12-11
2019-08-21T12:18:04Z
2019-02-13
2019-08-21T12:18:04Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://repositorio.ufpb.br/jspui/handle/123456789/15327
url https://repositorio.ufpb.br/jspui/handle/123456789/15327
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv Attribution-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nd/3.0/br/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nd/3.0/br/
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Universidade Federal da Paraíba
Brasil
Biologia Celular e Molecular
Programa de Pós-Graduação em Biologia Celular e Molecular
UFPB
publisher.none.fl_str_mv Universidade Federal da Paraíba
Brasil
Biologia Celular e Molecular
Programa de Pós-Graduação em Biologia Celular e Molecular
UFPB
dc.source.none.fl_str_mv reponame:Biblioteca Digital de Teses e Dissertações da UFPB
instname:Universidade Federal da Paraíba (UFPB)
instacron:UFPB
instname_str Universidade Federal da Paraíba (UFPB)
instacron_str UFPB
institution UFPB
reponame_str Biblioteca Digital de Teses e Dissertações da UFPB
collection Biblioteca Digital de Teses e Dissertações da UFPB
repository.name.fl_str_mv Biblioteca Digital de Teses e Dissertações da UFPB - Universidade Federal da Paraíba (UFPB)
repository.mail.fl_str_mv diretoria@ufpb.br|| diretoria@ufpb.br
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