Genetic diversity within and among populations of Cajazeira

Detalhes bibliográficos
Autor(a) principal: Lopes, Maria Teresa Gomes
Data de Publicação: 2014
Outros Autores: Coelho, Lucyanna Moura, Costa Neto, Pedro de Queiroz, Bentes, Jania Silva
Tipo de documento: Artigo
Idioma: por
Título da fonte: Revista de Ciências Agrárias (Belém. Online)
Texto Completo: https://ajaes.ufra.edu.br/index.php/ajaes/article/view/1470
Resumo:   Spondias mombin is a fruit species belonging in the Anacardiaceae family with a large geographical distribution. It is of economical and social importance due to its fruit being intensively used for the industrial purposes of making juice, popsicle, jelly, and liquors. The objective of this work was the characterization of the genetic diversity both intra and inter populations of this species. This analysis was made by means of molecular markers of the type AFLP (amplified fragment length polymorphism) in three populations in a region close to Manaus city, state of Amazonas: Amozonas National University (UFAM), Buriti village (VLB) and the Executive Commission for the Cultivation of Cacao (Ceplac). Ten oligonucleotide combinations were tested and four of them were picked for this analysis: E + AAC/M + CAT, E + AGT/M + CTC, E + AAC/M + CTC, E + AGT/M + CAT. The oligonucleotides revealed 283 polymorphic loci with a variation of 63 to 97.2% inter populations. The calculated Fst (genetic differentiation between populations) was of 0.52, this meaning a high level of genetic differentiation inter populations. According to the molecular analysis of variance, the variations inter and intra populations were of 52.8 and 47.1%, respectively. The dendrogram based on the AFLP markers showed the existence of two groups, one being that of the natural populations (UFAM and VLB) and another group formed by a population developed under cropping practices (Ceplac). The AFLP markers are efficient to detect genetic diversity in S. mombin and thus differentiate between populations of distinct constitutions. Most of the genetic variability is found to occur inter populations.
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spelling Genetic diversity within and among populations of Cajazeira  Spondias mombin is a fruit species belonging in the Anacardiaceae family with a large geographical distribution. It is of economical and social importance due to its fruit being intensively used for the industrial purposes of making juice, popsicle, jelly, and liquors. The objective of this work was the characterization of the genetic diversity both intra and inter populations of this species. This analysis was made by means of molecular markers of the type AFLP (amplified fragment length polymorphism) in three populations in a region close to Manaus city, state of Amazonas: Amozonas National University (UFAM), Buriti village (VLB) and the Executive Commission for the Cultivation of Cacao (Ceplac). Ten oligonucleotide combinations were tested and four of them were picked for this analysis: E + AAC/M + CAT, E + AGT/M + CTC, E + AAC/M + CTC, E + AGT/M + CAT. The oligonucleotides revealed 283 polymorphic loci with a variation of 63 to 97.2% inter populations. The calculated Fst (genetic differentiation between populations) was of 0.52, this meaning a high level of genetic differentiation inter populations. According to the molecular analysis of variance, the variations inter and intra populations were of 52.8 and 47.1%, respectively. The dendrogram based on the AFLP markers showed the existence of two groups, one being that of the natural populations (UFAM and VLB) and another group formed by a population developed under cropping practices (Ceplac). The AFLP markers are efficient to detect genetic diversity in S. mombin and thus differentiate between populations of distinct constitutions. Most of the genetic variability is found to occur inter populations.Universidade Federal Rural da Amazônia/UFRA2014-02-25info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://ajaes.ufra.edu.br/index.php/ajaes/article/view/1470Amazonian Journal of Agricultural Sciences Journal of Agricultural and Environmental Sciences; Vol 56 No Suple (2013): RCA; 61-67Revista de Ciências Agrárias Amazonian Journal of Agricultural and Environmental Sciences; v. 56 n. Suple (2013): RCA; 61-672177-87601517-591Xreponame:Revista de Ciências Agrárias (Belém. Online)instname:Universidade Federal Rural da Amazônia (UFRA)instacron:UFRAporhttps://ajaes.ufra.edu.br/index.php/ajaes/article/view/1470/452Lopes, Maria Teresa GomesCoelho, Lucyanna MouraCosta Neto, Pedro de QueirozBentes, Jania Silvainfo:eu-repo/semantics/openAccess2018-12-18T18:48:38Zoai:ojs.www.periodicos.ufra.edu.br:article/1470Revistahttps://ajaes.ufra.edu.br/index.php/ajaes/PUBhttps://ajaes.ufra.edu.br/index.php/ajaes/oaiallan.lobato@ufra.edu.br || ajaes.suporte@gmail.com2177-87601517-591Xopendoar:2018-12-18T18:48:38Revista de Ciências Agrárias (Belém. Online) - Universidade Federal Rural da Amazônia (UFRA)false
dc.title.none.fl_str_mv Genetic diversity within and among populations of Cajazeira
title Genetic diversity within and among populations of Cajazeira
spellingShingle Genetic diversity within and among populations of Cajazeira
Lopes, Maria Teresa Gomes
title_short Genetic diversity within and among populations of Cajazeira
title_full Genetic diversity within and among populations of Cajazeira
title_fullStr Genetic diversity within and among populations of Cajazeira
title_full_unstemmed Genetic diversity within and among populations of Cajazeira
title_sort Genetic diversity within and among populations of Cajazeira
author Lopes, Maria Teresa Gomes
author_facet Lopes, Maria Teresa Gomes
Coelho, Lucyanna Moura
Costa Neto, Pedro de Queiroz
Bentes, Jania Silva
author_role author
author2 Coelho, Lucyanna Moura
Costa Neto, Pedro de Queiroz
Bentes, Jania Silva
author2_role author
author
author
dc.contributor.author.fl_str_mv Lopes, Maria Teresa Gomes
Coelho, Lucyanna Moura
Costa Neto, Pedro de Queiroz
Bentes, Jania Silva
description   Spondias mombin is a fruit species belonging in the Anacardiaceae family with a large geographical distribution. It is of economical and social importance due to its fruit being intensively used for the industrial purposes of making juice, popsicle, jelly, and liquors. The objective of this work was the characterization of the genetic diversity both intra and inter populations of this species. This analysis was made by means of molecular markers of the type AFLP (amplified fragment length polymorphism) in three populations in a region close to Manaus city, state of Amazonas: Amozonas National University (UFAM), Buriti village (VLB) and the Executive Commission for the Cultivation of Cacao (Ceplac). Ten oligonucleotide combinations were tested and four of them were picked for this analysis: E + AAC/M + CAT, E + AGT/M + CTC, E + AAC/M + CTC, E + AGT/M + CAT. The oligonucleotides revealed 283 polymorphic loci with a variation of 63 to 97.2% inter populations. The calculated Fst (genetic differentiation between populations) was of 0.52, this meaning a high level of genetic differentiation inter populations. According to the molecular analysis of variance, the variations inter and intra populations were of 52.8 and 47.1%, respectively. The dendrogram based on the AFLP markers showed the existence of two groups, one being that of the natural populations (UFAM and VLB) and another group formed by a population developed under cropping practices (Ceplac). The AFLP markers are efficient to detect genetic diversity in S. mombin and thus differentiate between populations of distinct constitutions. Most of the genetic variability is found to occur inter populations.
publishDate 2014
dc.date.none.fl_str_mv 2014-02-25
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://ajaes.ufra.edu.br/index.php/ajaes/article/view/1470
url https://ajaes.ufra.edu.br/index.php/ajaes/article/view/1470
dc.language.iso.fl_str_mv por
language por
dc.relation.none.fl_str_mv https://ajaes.ufra.edu.br/index.php/ajaes/article/view/1470/452
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.none.fl_str_mv Universidade Federal Rural da Amazônia/UFRA
publisher.none.fl_str_mv Universidade Federal Rural da Amazônia/UFRA
dc.source.none.fl_str_mv Amazonian Journal of Agricultural Sciences Journal of Agricultural and Environmental Sciences; Vol 56 No Suple (2013): RCA; 61-67
Revista de Ciências Agrárias Amazonian Journal of Agricultural and Environmental Sciences; v. 56 n. Suple (2013): RCA; 61-67
2177-8760
1517-591X
reponame:Revista de Ciências Agrárias (Belém. Online)
instname:Universidade Federal Rural da Amazônia (UFRA)
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instname_str Universidade Federal Rural da Amazônia (UFRA)
instacron_str UFRA
institution UFRA
reponame_str Revista de Ciências Agrárias (Belém. Online)
collection Revista de Ciências Agrárias (Belém. Online)
repository.name.fl_str_mv Revista de Ciências Agrárias (Belém. Online) - Universidade Federal Rural da Amazônia (UFRA)
repository.mail.fl_str_mv allan.lobato@ufra.edu.br || ajaes.suporte@gmail.com
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