RNA expression of the molecular signature genes for metastasis in colorectal cancer

Detalhes bibliográficos
Autor(a) principal: Carvalho, Luciano Pinto de
Data de Publicação: 2011
Outros Autores: Yu, Jinsheng, Schwartsmann, Gilberto, McLeod, Howard L., Fleshman, James W.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/194136
Resumo: Colorectal cancer is an endemic disease in the Western world. Search for molecular signatures present in primary tumors that predict tumor metastasis potential has been proposed and in particular, a 17-gene molecular signature is associated with poor survival in breast cancer, prostate cancer, meduloblastoma and lymphoma in a recent study. Using quantitative real-time PCR assay (qPCR), our study observed tumor-normal differential RNA expression in 15 of these 17 genes in a cohort of 52 stage III colorectal cancer patients (all P<0.05), which signified the importance of these 17 signature genes in colorectal cancer. Although no significant correlation was found between tumor RNA levels of these 17 genes and some of clinical features (age, gender, and location, all P>0.05), two distinct groups among these genes were observed with Spearman correlation scores >0.6 (P<0.01), suggesting co-expression/interaction within these genes. Of the 37 patients for whom complete follow-up data was available, 12 patients had recurrence and 25 had no recurrence. There was no significant difference in tumor RNA levels between recurrence and non-recurrence groups for the 17 genes (all P>0.05), but the recurrence group had more patients with mucinous tumors (9/12 vs. 7/25, P<0.05) and more lymph node involvement (median 7.2 vs. 2.5, P<0.05) compared to the non-recurrence group. Moreover, survival analysis revealed a significant difference in patient overall survival time between low and high tumor RNA levels for 1 of the 17 genes (PTTG1, P=0.024). Our qPCR validation study confirms the importance of most 17-gene molecular signature genes with differential RNA expression and suggests the relevance of PTTG1 for survival in colorectal cancers.
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spelling Carvalho, Luciano Pinto deYu, JinshengSchwartsmann, GilbertoMcLeod, Howard L.Fleshman, James W.2019-05-11T02:37:38Z20111791-2431http://hdl.handle.net/10183/194136000979932Colorectal cancer is an endemic disease in the Western world. Search for molecular signatures present in primary tumors that predict tumor metastasis potential has been proposed and in particular, a 17-gene molecular signature is associated with poor survival in breast cancer, prostate cancer, meduloblastoma and lymphoma in a recent study. Using quantitative real-time PCR assay (qPCR), our study observed tumor-normal differential RNA expression in 15 of these 17 genes in a cohort of 52 stage III colorectal cancer patients (all P<0.05), which signified the importance of these 17 signature genes in colorectal cancer. Although no significant correlation was found between tumor RNA levels of these 17 genes and some of clinical features (age, gender, and location, all P>0.05), two distinct groups among these genes were observed with Spearman correlation scores >0.6 (P<0.01), suggesting co-expression/interaction within these genes. Of the 37 patients for whom complete follow-up data was available, 12 patients had recurrence and 25 had no recurrence. There was no significant difference in tumor RNA levels between recurrence and non-recurrence groups for the 17 genes (all P>0.05), but the recurrence group had more patients with mucinous tumors (9/12 vs. 7/25, P<0.05) and more lymph node involvement (median 7.2 vs. 2.5, P<0.05) compared to the non-recurrence group. Moreover, survival analysis revealed a significant difference in patient overall survival time between low and high tumor RNA levels for 1 of the 17 genes (PTTG1, P=0.024). Our qPCR validation study confirms the importance of most 17-gene molecular signature genes with differential RNA expression and suggests the relevance of PTTG1 for survival in colorectal cancers.application/pdfengOncology reports. London. Vol. 25, no. 5 (May 2011), p. 1321-1327Expressão gênicaNeoplasias colorretaisMetástase neoplásicaGene expressionQuantitative PCRColorectal cancerMetastasisRNA expression of the molecular signature genes for metastasis in colorectal cancerEstrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSTEXT000979932.pdf.txt000979932.pdf.txtExtracted Texttext/plain33187http://www.lume.ufrgs.br/bitstream/10183/194136/2/000979932.pdf.txt149cf52e90f3bbd199fdccfc82425c8fMD52ORIGINAL000979932.pdfTexto completo (inglês)application/pdf249843http://www.lume.ufrgs.br/bitstream/10183/194136/1/000979932.pdf491a04e248a0be2520b89bd374f7cd50MD5110183/1941362019-05-12 02:36:34.209158oai:www.lume.ufrgs.br:10183/194136Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2019-05-12T05:36:34Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv RNA expression of the molecular signature genes for metastasis in colorectal cancer
title RNA expression of the molecular signature genes for metastasis in colorectal cancer
spellingShingle RNA expression of the molecular signature genes for metastasis in colorectal cancer
Carvalho, Luciano Pinto de
Expressão gênica
Neoplasias colorretais
Metástase neoplásica
Gene expression
Quantitative PCR
Colorectal cancer
Metastasis
title_short RNA expression of the molecular signature genes for metastasis in colorectal cancer
title_full RNA expression of the molecular signature genes for metastasis in colorectal cancer
title_fullStr RNA expression of the molecular signature genes for metastasis in colorectal cancer
title_full_unstemmed RNA expression of the molecular signature genes for metastasis in colorectal cancer
title_sort RNA expression of the molecular signature genes for metastasis in colorectal cancer
author Carvalho, Luciano Pinto de
author_facet Carvalho, Luciano Pinto de
Yu, Jinsheng
Schwartsmann, Gilberto
McLeod, Howard L.
Fleshman, James W.
author_role author
author2 Yu, Jinsheng
Schwartsmann, Gilberto
McLeod, Howard L.
Fleshman, James W.
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Carvalho, Luciano Pinto de
Yu, Jinsheng
Schwartsmann, Gilberto
McLeod, Howard L.
Fleshman, James W.
dc.subject.por.fl_str_mv Expressão gênica
Neoplasias colorretais
Metástase neoplásica
topic Expressão gênica
Neoplasias colorretais
Metástase neoplásica
Gene expression
Quantitative PCR
Colorectal cancer
Metastasis
dc.subject.eng.fl_str_mv Gene expression
Quantitative PCR
Colorectal cancer
Metastasis
description Colorectal cancer is an endemic disease in the Western world. Search for molecular signatures present in primary tumors that predict tumor metastasis potential has been proposed and in particular, a 17-gene molecular signature is associated with poor survival in breast cancer, prostate cancer, meduloblastoma and lymphoma in a recent study. Using quantitative real-time PCR assay (qPCR), our study observed tumor-normal differential RNA expression in 15 of these 17 genes in a cohort of 52 stage III colorectal cancer patients (all P<0.05), which signified the importance of these 17 signature genes in colorectal cancer. Although no significant correlation was found between tumor RNA levels of these 17 genes and some of clinical features (age, gender, and location, all P>0.05), two distinct groups among these genes were observed with Spearman correlation scores >0.6 (P<0.01), suggesting co-expression/interaction within these genes. Of the 37 patients for whom complete follow-up data was available, 12 patients had recurrence and 25 had no recurrence. There was no significant difference in tumor RNA levels between recurrence and non-recurrence groups for the 17 genes (all P>0.05), but the recurrence group had more patients with mucinous tumors (9/12 vs. 7/25, P<0.05) and more lymph node involvement (median 7.2 vs. 2.5, P<0.05) compared to the non-recurrence group. Moreover, survival analysis revealed a significant difference in patient overall survival time between low and high tumor RNA levels for 1 of the 17 genes (PTTG1, P=0.024). Our qPCR validation study confirms the importance of most 17-gene molecular signature genes with differential RNA expression and suggests the relevance of PTTG1 for survival in colorectal cancers.
publishDate 2011
dc.date.issued.fl_str_mv 2011
dc.date.accessioned.fl_str_mv 2019-05-11T02:37:38Z
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dc.relation.ispartof.pt_BR.fl_str_mv Oncology reports. London. Vol. 25, no. 5 (May 2011), p. 1321-1327
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