Integrating citizen-science and planned-survey data improves species distribution estimates

Detalhes bibliográficos
Autor(a) principal: Zulian, Viviane
Data de Publicação: 2021
Outros Autores: Miller, David A.W., Oliveira, Gonçalo Nuno Côrte-Real Ferraz de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/274358
Resumo: Aim: Mapping species distributions is a crucial but challenging requirement of wildlife management. The frequent need to sample vast expanses of potential habitat increases the cost of planned surveys and rewards accumulation of opportunistic observations. In this paper, we integrate planned-survey data from roost counts with opportunistic samples from eBird, WikiAves and Xeno-canto citizen-science platforms to map the geographic range of the endangered Vinaceous-breasted Parrot. We demonstrate the estimation and mapping of species occurrence based on data integration while accounting for specifics of each dataset, including observation technique and uncertainty about the observations. Location: Argentina, Brazil and Paraguay. Methods: Our analysis illustrates (a) the incorporation of sampling effort, spatial autocorrelation and site covariates in a joint-likelihood, hierarchical, data integration model; (b) the evaluation of the contribution of each dataset, as well as the contribution of effort covariates, spatial autocorrelation and site covariates to the predictive ability of fitted models using a cross-validation approach; and (c) how spatial representation of the latent occupancy state (i.e. realized occupancy) helps identify areas with high uncertainty that should be prioritized in future fieldwork. Results: We estimate a Vinaceous-breasted Parrot geographic range of 434,670 km², which is three times larger than the “Extant” area previously reported in the IUCN Red List. The exclusion of one dataset at a time from the analyses always resulted in worse predictions by the models of truncated data than by the Full Model, which included all datasets. Likewise, exclusion of spatial autocorrelation, site covariates or sampling effort resulted in worse predictions. Main conclusions: The integration of different datasets into one joint-likelihood model produced a more reliable representation of the species range than any individual dataset taken on its own, improving the use of citizen-science data in combination with planned-survey results.
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spelling Zulian, VivianeMiller, David A.W.Oliveira, Gonçalo Nuno Côrte-Real Ferraz de2024-03-28T06:25:33Z20211472-4642http://hdl.handle.net/10183/274358001171723Aim: Mapping species distributions is a crucial but challenging requirement of wildlife management. The frequent need to sample vast expanses of potential habitat increases the cost of planned surveys and rewards accumulation of opportunistic observations. In this paper, we integrate planned-survey data from roost counts with opportunistic samples from eBird, WikiAves and Xeno-canto citizen-science platforms to map the geographic range of the endangered Vinaceous-breasted Parrot. We demonstrate the estimation and mapping of species occurrence based on data integration while accounting for specifics of each dataset, including observation technique and uncertainty about the observations. Location: Argentina, Brazil and Paraguay. Methods: Our analysis illustrates (a) the incorporation of sampling effort, spatial autocorrelation and site covariates in a joint-likelihood, hierarchical, data integration model; (b) the evaluation of the contribution of each dataset, as well as the contribution of effort covariates, spatial autocorrelation and site covariates to the predictive ability of fitted models using a cross-validation approach; and (c) how spatial representation of the latent occupancy state (i.e. realized occupancy) helps identify areas with high uncertainty that should be prioritized in future fieldwork. Results: We estimate a Vinaceous-breasted Parrot geographic range of 434,670 km², which is three times larger than the “Extant” area previously reported in the IUCN Red List. The exclusion of one dataset at a time from the analyses always resulted in worse predictions by the models of truncated data than by the Full Model, which included all datasets. Likewise, exclusion of spatial autocorrelation, site covariates or sampling effort resulted in worse predictions. Main conclusions: The integration of different datasets into one joint-likelihood model produced a more reliable representation of the species range than any individual dataset taken on its own, improving the use of citizen-science data in combination with planned-survey results.application/pdfengDiversity and Distributions Journal. Oxford. Vol. 27, no.12 (Dec. 2021), 2498–509Ciência cidadãModelos de distribuição de espéciesPapagaio-de-peito-roxo Amazona vinaceaData integration modelsEndangered speciesGeographic rangeIntegrating citizen-science and planned-survey data improves species distribution estimatesEstrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSTEXT001171723.pdf.txt001171723.pdf.txtExtracted Texttext/plain67109http://www.lume.ufrgs.br/bitstream/10183/274358/2/001171723.pdf.txta13130701ae289e5f11cdd1667a50ab1MD52ORIGINAL001171723.pdfTexto completo (inglês)application/pdf2820627http://www.lume.ufrgs.br/bitstream/10183/274358/1/001171723.pdf1af8e2995a9c131a22d4adf556ff904dMD5110183/2743582024-03-29 06:17:38.13179oai:www.lume.ufrgs.br:10183/274358Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2024-03-29T09:17:38Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv Integrating citizen-science and planned-survey data improves species distribution estimates
title Integrating citizen-science and planned-survey data improves species distribution estimates
spellingShingle Integrating citizen-science and planned-survey data improves species distribution estimates
Zulian, Viviane
Ciência cidadã
Modelos de distribuição de espécies
Papagaio-de-peito-roxo Amazona vinacea
Data integration models
Endangered species
Geographic range
title_short Integrating citizen-science and planned-survey data improves species distribution estimates
title_full Integrating citizen-science and planned-survey data improves species distribution estimates
title_fullStr Integrating citizen-science and planned-survey data improves species distribution estimates
title_full_unstemmed Integrating citizen-science and planned-survey data improves species distribution estimates
title_sort Integrating citizen-science and planned-survey data improves species distribution estimates
author Zulian, Viviane
author_facet Zulian, Viviane
Miller, David A.W.
Oliveira, Gonçalo Nuno Côrte-Real Ferraz de
author_role author
author2 Miller, David A.W.
Oliveira, Gonçalo Nuno Côrte-Real Ferraz de
author2_role author
author
dc.contributor.author.fl_str_mv Zulian, Viviane
Miller, David A.W.
Oliveira, Gonçalo Nuno Côrte-Real Ferraz de
dc.subject.por.fl_str_mv Ciência cidadã
Modelos de distribuição de espécies
Papagaio-de-peito-roxo Amazona vinacea
topic Ciência cidadã
Modelos de distribuição de espécies
Papagaio-de-peito-roxo Amazona vinacea
Data integration models
Endangered species
Geographic range
dc.subject.eng.fl_str_mv Data integration models
Endangered species
Geographic range
description Aim: Mapping species distributions is a crucial but challenging requirement of wildlife management. The frequent need to sample vast expanses of potential habitat increases the cost of planned surveys and rewards accumulation of opportunistic observations. In this paper, we integrate planned-survey data from roost counts with opportunistic samples from eBird, WikiAves and Xeno-canto citizen-science platforms to map the geographic range of the endangered Vinaceous-breasted Parrot. We demonstrate the estimation and mapping of species occurrence based on data integration while accounting for specifics of each dataset, including observation technique and uncertainty about the observations. Location: Argentina, Brazil and Paraguay. Methods: Our analysis illustrates (a) the incorporation of sampling effort, spatial autocorrelation and site covariates in a joint-likelihood, hierarchical, data integration model; (b) the evaluation of the contribution of each dataset, as well as the contribution of effort covariates, spatial autocorrelation and site covariates to the predictive ability of fitted models using a cross-validation approach; and (c) how spatial representation of the latent occupancy state (i.e. realized occupancy) helps identify areas with high uncertainty that should be prioritized in future fieldwork. Results: We estimate a Vinaceous-breasted Parrot geographic range of 434,670 km², which is three times larger than the “Extant” area previously reported in the IUCN Red List. The exclusion of one dataset at a time from the analyses always resulted in worse predictions by the models of truncated data than by the Full Model, which included all datasets. Likewise, exclusion of spatial autocorrelation, site covariates or sampling effort resulted in worse predictions. Main conclusions: The integration of different datasets into one joint-likelihood model produced a more reliable representation of the species range than any individual dataset taken on its own, improving the use of citizen-science data in combination with planned-survey results.
publishDate 2021
dc.date.issued.fl_str_mv 2021
dc.date.accessioned.fl_str_mv 2024-03-28T06:25:33Z
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dc.relation.ispartof.pt_BR.fl_str_mv Diversity and Distributions Journal. Oxford. Vol. 27, no.12 (Dec. 2021), 2498–509
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