The germ cell marker dead end reveals alternatively spliced transcripts with dissimilar expression
Autor(a) principal: | |
---|---|
Data de Publicação: | 2019 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UFRGS |
Texto Completo: | http://hdl.handle.net/10183/225516 |
Resumo: | Since the late 19th century, the Amazon species Colossoma macropomum (tambaqui) has been exploited commercially and the climate change has contributed to decline in tambaqui numbers. Although germ cell cryopreservation and transplantation can help preserve the species’ genetic resources semipermanently, its germ cell behavior has not been analyzed to date. In this study, we isolated the tambaqui’s dead end gene (dnd) homolog (tdnd) and used it as a molecular marker for germ cells to obtain basic information essential for transplantation. The amino acid sequence showed 98% similarity and 53% identity with the zebrafish dnd. Phylogenetic analysis and the presence of consensus motifs known for dnd revealed that tdnd encodes the dnd ortholog and its transcript is detectable only in the testes and ovaries, showing a strong positive signal in oocytes and spermatogonia. The tambaqui possesses, at least, three different transcripts of tdnd which show dissimilar expression profile in undifferentiated and sexually mature animals, suggesting that they play distinct roles in germline development and they may influence the choice of donors for the cell transplantation study. |
id |
UFRGS-2_413b6a742fef774896b3545eda8d925b |
---|---|
oai_identifier_str |
oai:www.lume.ufrgs.br:10183/225516 |
network_acronym_str |
UFRGS-2 |
network_name_str |
Repositório Institucional da UFRGS |
repository_id_str |
|
spelling |
Vasconcelos, Ana Carina NogueiraStreit Júnior, Danilo PedroOctavera, AnnaMiwa, MisakoKabeya, NaokiYoshizaki, Goro2021-08-11T04:47:02Z20192045-2322http://hdl.handle.net/10183/225516001107429Since the late 19th century, the Amazon species Colossoma macropomum (tambaqui) has been exploited commercially and the climate change has contributed to decline in tambaqui numbers. Although germ cell cryopreservation and transplantation can help preserve the species’ genetic resources semipermanently, its germ cell behavior has not been analyzed to date. In this study, we isolated the tambaqui’s dead end gene (dnd) homolog (tdnd) and used it as a molecular marker for germ cells to obtain basic information essential for transplantation. The amino acid sequence showed 98% similarity and 53% identity with the zebrafish dnd. Phylogenetic analysis and the presence of consensus motifs known for dnd revealed that tdnd encodes the dnd ortholog and its transcript is detectable only in the testes and ovaries, showing a strong positive signal in oocytes and spermatogonia. The tambaqui possesses, at least, three different transcripts of tdnd which show dissimilar expression profile in undifferentiated and sexually mature animals, suggesting that they play distinct roles in germline development and they may influence the choice of donors for the cell transplantation study.application/pdfengScientific reports. London. Vol. 9 (Feb. 2019), 2407, 10 p.TambaquiMarcador molecularGenética animalThe germ cell marker dead end reveals alternatively spliced transcripts with dissimilar expressionEstrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSTEXT001107429.pdf.txt001107429.pdf.txtExtracted Texttext/plain40369http://www.lume.ufrgs.br/bitstream/10183/225516/2/001107429.pdf.txt19d60ff5d4ce6e17d4998d1e919cdd40MD52ORIGINAL001107429.pdfTexto completo (inglês)application/pdf3656347http://www.lume.ufrgs.br/bitstream/10183/225516/1/001107429.pdfc74fc8169d56dec713a168da17dde38dMD5110183/2255162024-05-25 06:48:07.577302oai:www.lume.ufrgs.br:10183/225516Repositório InstitucionalPUBhttps://lume.ufrgs.br/oai/requestlume@ufrgs.bropendoar:2024-05-25T09:48:07Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false |
dc.title.pt_BR.fl_str_mv |
The germ cell marker dead end reveals alternatively spliced transcripts with dissimilar expression |
title |
The germ cell marker dead end reveals alternatively spliced transcripts with dissimilar expression |
spellingShingle |
The germ cell marker dead end reveals alternatively spliced transcripts with dissimilar expression Vasconcelos, Ana Carina Nogueira Tambaqui Marcador molecular Genética animal |
title_short |
The germ cell marker dead end reveals alternatively spliced transcripts with dissimilar expression |
title_full |
The germ cell marker dead end reveals alternatively spliced transcripts with dissimilar expression |
title_fullStr |
The germ cell marker dead end reveals alternatively spliced transcripts with dissimilar expression |
title_full_unstemmed |
The germ cell marker dead end reveals alternatively spliced transcripts with dissimilar expression |
title_sort |
The germ cell marker dead end reveals alternatively spliced transcripts with dissimilar expression |
author |
Vasconcelos, Ana Carina Nogueira |
author_facet |
Vasconcelos, Ana Carina Nogueira Streit Júnior, Danilo Pedro Octavera, Anna Miwa, Misako Kabeya, Naoki Yoshizaki, Goro |
author_role |
author |
author2 |
Streit Júnior, Danilo Pedro Octavera, Anna Miwa, Misako Kabeya, Naoki Yoshizaki, Goro |
author2_role |
author author author author author |
dc.contributor.author.fl_str_mv |
Vasconcelos, Ana Carina Nogueira Streit Júnior, Danilo Pedro Octavera, Anna Miwa, Misako Kabeya, Naoki Yoshizaki, Goro |
dc.subject.por.fl_str_mv |
Tambaqui Marcador molecular Genética animal |
topic |
Tambaqui Marcador molecular Genética animal |
description |
Since the late 19th century, the Amazon species Colossoma macropomum (tambaqui) has been exploited commercially and the climate change has contributed to decline in tambaqui numbers. Although germ cell cryopreservation and transplantation can help preserve the species’ genetic resources semipermanently, its germ cell behavior has not been analyzed to date. In this study, we isolated the tambaqui’s dead end gene (dnd) homolog (tdnd) and used it as a molecular marker for germ cells to obtain basic information essential for transplantation. The amino acid sequence showed 98% similarity and 53% identity with the zebrafish dnd. Phylogenetic analysis and the presence of consensus motifs known for dnd revealed that tdnd encodes the dnd ortholog and its transcript is detectable only in the testes and ovaries, showing a strong positive signal in oocytes and spermatogonia. The tambaqui possesses, at least, three different transcripts of tdnd which show dissimilar expression profile in undifferentiated and sexually mature animals, suggesting that they play distinct roles in germline development and they may influence the choice of donors for the cell transplantation study. |
publishDate |
2019 |
dc.date.issued.fl_str_mv |
2019 |
dc.date.accessioned.fl_str_mv |
2021-08-11T04:47:02Z |
dc.type.driver.fl_str_mv |
Estrangeiro info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10183/225516 |
dc.identifier.issn.pt_BR.fl_str_mv |
2045-2322 |
dc.identifier.nrb.pt_BR.fl_str_mv |
001107429 |
identifier_str_mv |
2045-2322 001107429 |
url |
http://hdl.handle.net/10183/225516 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.ispartof.pt_BR.fl_str_mv |
Scientific reports. London. Vol. 9 (Feb. 2019), 2407, 10 p. |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da UFRGS instname:Universidade Federal do Rio Grande do Sul (UFRGS) instacron:UFRGS |
instname_str |
Universidade Federal do Rio Grande do Sul (UFRGS) |
instacron_str |
UFRGS |
institution |
UFRGS |
reponame_str |
Repositório Institucional da UFRGS |
collection |
Repositório Institucional da UFRGS |
bitstream.url.fl_str_mv |
http://www.lume.ufrgs.br/bitstream/10183/225516/2/001107429.pdf.txt http://www.lume.ufrgs.br/bitstream/10183/225516/1/001107429.pdf |
bitstream.checksum.fl_str_mv |
19d60ff5d4ce6e17d4998d1e919cdd40 c74fc8169d56dec713a168da17dde38d |
bitstream.checksumAlgorithm.fl_str_mv |
MD5 MD5 |
repository.name.fl_str_mv |
Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS) |
repository.mail.fl_str_mv |
lume@ufrgs.br |
_version_ |
1824427407981936640 |