Evaluation of genetic variability in the collared peccary Pecari tajacu and the white-lipped peccary Tayassu pecari by microsatellite markers

Detalhes bibliográficos
Autor(a) principal: Silva, Roxane Wirschum
Data de Publicação: 2010
Outros Autores: Freitas, Thales Renato Ochotorena de, Sbalqueiro, Ives Jose
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/23417
Resumo: In this study, the microsatellite technique was used to evaluate the genetic variability in populations of collared and white-lipped peccaries kept in captivity. Six primers developed for domestic pigs were used and amplified in both species. They revealed the presence of five polymorphic loci and one monomorphic locus. The polymorphic loci included 4 of the 16 alleles in collared peccaries, and 3 of the 10 alleles in the white-lipped peccaries. Polymorphic information content (PIC) in both species and all the loci was highly informative. The probability of paternity exclusion (PEC), if one of the parents is known, was almost as high in white-lipped peccaries (95.53%) as in the collared (99,48%). The Fst values for collared (0.042) and white-lipped (0.1387) peccaries showed that both populations are not structured. The Fis values for all loci, except ACTG2 in white-lipped peccaries (-0.0275) and in both species (0.1985 to 0.9284 in collared peccaries and 0.3621 to 0.4754 in the white-lipped), revealed a high level of homozygosis, probably caused by inbreeding. Data on heterologous amplification and genetic variability in collared and white-lipped peccaries are presented for the first time.
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spelling Silva, Roxane WirschumFreitas, Thales Renato Ochotorena deSbalqueiro, Ives Jose2010-06-05T04:17:30Z20101415-4757http://hdl.handle.net/10183/23417000733052In this study, the microsatellite technique was used to evaluate the genetic variability in populations of collared and white-lipped peccaries kept in captivity. Six primers developed for domestic pigs were used and amplified in both species. They revealed the presence of five polymorphic loci and one monomorphic locus. The polymorphic loci included 4 of the 16 alleles in collared peccaries, and 3 of the 10 alleles in the white-lipped peccaries. Polymorphic information content (PIC) in both species and all the loci was highly informative. The probability of paternity exclusion (PEC), if one of the parents is known, was almost as high in white-lipped peccaries (95.53%) as in the collared (99,48%). The Fst values for collared (0.042) and white-lipped (0.1387) peccaries showed that both populations are not structured. The Fis values for all loci, except ACTG2 in white-lipped peccaries (-0.0275) and in both species (0.1985 to 0.9284 in collared peccaries and 0.3621 to 0.4754 in the white-lipped), revealed a high level of homozygosis, probably caused by inbreeding. Data on heterologous amplification and genetic variability in collared and white-lipped peccaries are presented for the first time.application/pdfengGenetics and molecular biology. Ribeirão Preto. Vol. 33, no. 1 (Mar. 2010), p. 62-67MicrossatéliteVariação genéticaTayassu pecariPecari tajacuMicrosatellite markersTayassu pecariPecari tajacuGenetic variabilityAnimals of captivityEvaluation of genetic variability in the collared peccary Pecari tajacu and the white-lipped peccary Tayassu pecari by microsatellite markersinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/otherinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSTEXT000733052.pdf.txt000733052.pdf.txtExtracted Texttext/plain25329http://www.lume.ufrgs.br/bitstream/10183/23417/2/000733052.pdf.txt7a4ab309f33ec2de0aa6e10efe6e8247MD52ORIGINAL000733052.pdf000733052.pdfTexto completo (inglês)application/pdf181075http://www.lume.ufrgs.br/bitstream/10183/23417/1/000733052.pdfdd5957984efc703b57a2a8079423d1c9MD51THUMBNAIL000733052.pdf.jpg000733052.pdf.jpgGenerated Thumbnailimage/jpeg1909http://www.lume.ufrgs.br/bitstream/10183/23417/3/000733052.pdf.jpg2eacbe8da7a9810c5f462c54cf008bf5MD5310183/234172024-04-10 06:32:52.096305oai:www.lume.ufrgs.br:10183/23417Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2024-04-10T09:32:52Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv Evaluation of genetic variability in the collared peccary Pecari tajacu and the white-lipped peccary Tayassu pecari by microsatellite markers
title Evaluation of genetic variability in the collared peccary Pecari tajacu and the white-lipped peccary Tayassu pecari by microsatellite markers
spellingShingle Evaluation of genetic variability in the collared peccary Pecari tajacu and the white-lipped peccary Tayassu pecari by microsatellite markers
Silva, Roxane Wirschum
Microssatélite
Variação genética
Tayassu pecari
Pecari tajacu
Microsatellite markers
Tayassu pecari
Pecari tajacu
Genetic variability
Animals of captivity
title_short Evaluation of genetic variability in the collared peccary Pecari tajacu and the white-lipped peccary Tayassu pecari by microsatellite markers
title_full Evaluation of genetic variability in the collared peccary Pecari tajacu and the white-lipped peccary Tayassu pecari by microsatellite markers
title_fullStr Evaluation of genetic variability in the collared peccary Pecari tajacu and the white-lipped peccary Tayassu pecari by microsatellite markers
title_full_unstemmed Evaluation of genetic variability in the collared peccary Pecari tajacu and the white-lipped peccary Tayassu pecari by microsatellite markers
title_sort Evaluation of genetic variability in the collared peccary Pecari tajacu and the white-lipped peccary Tayassu pecari by microsatellite markers
author Silva, Roxane Wirschum
author_facet Silva, Roxane Wirschum
Freitas, Thales Renato Ochotorena de
Sbalqueiro, Ives Jose
author_role author
author2 Freitas, Thales Renato Ochotorena de
Sbalqueiro, Ives Jose
author2_role author
author
dc.contributor.author.fl_str_mv Silva, Roxane Wirschum
Freitas, Thales Renato Ochotorena de
Sbalqueiro, Ives Jose
dc.subject.por.fl_str_mv Microssatélite
Variação genética
Tayassu pecari
Pecari tajacu
topic Microssatélite
Variação genética
Tayassu pecari
Pecari tajacu
Microsatellite markers
Tayassu pecari
Pecari tajacu
Genetic variability
Animals of captivity
dc.subject.eng.fl_str_mv Microsatellite markers
Tayassu pecari
Pecari tajacu
Genetic variability
Animals of captivity
description In this study, the microsatellite technique was used to evaluate the genetic variability in populations of collared and white-lipped peccaries kept in captivity. Six primers developed for domestic pigs were used and amplified in both species. They revealed the presence of five polymorphic loci and one monomorphic locus. The polymorphic loci included 4 of the 16 alleles in collared peccaries, and 3 of the 10 alleles in the white-lipped peccaries. Polymorphic information content (PIC) in both species and all the loci was highly informative. The probability of paternity exclusion (PEC), if one of the parents is known, was almost as high in white-lipped peccaries (95.53%) as in the collared (99,48%). The Fst values for collared (0.042) and white-lipped (0.1387) peccaries showed that both populations are not structured. The Fis values for all loci, except ACTG2 in white-lipped peccaries (-0.0275) and in both species (0.1985 to 0.9284 in collared peccaries and 0.3621 to 0.4754 in the white-lipped), revealed a high level of homozygosis, probably caused by inbreeding. Data on heterologous amplification and genetic variability in collared and white-lipped peccaries are presented for the first time.
publishDate 2010
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dc.language.iso.fl_str_mv eng
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dc.relation.ispartof.pt_BR.fl_str_mv Genetics and molecular biology. Ribeirão Preto. Vol. 33, no. 1 (Mar. 2010), p. 62-67
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