Comparative genome analysis of entomopathogenic fungi reveals a complex set of secreted proteins

Detalhes bibliográficos
Autor(a) principal: Staats, Charley Christian
Data de Publicação: 2014
Outros Autores: Junges, Angela, Guedes, Rafael Lucas Muniz, Thompson, Claudia Elizabeth, Morais, Guilherme Loss de, Boldo, Juliano Tomazzoni, Almeida, Luiz Gonzaga Paula de, Andreis, Fábio Carrer, Gerber, Alexandra Lehmkuhl, Oliveira, Nicolau Sbaraini, Paixão, Rana Louise de Andrade da, Broetto, Leonardo, Landell, Melissa Fontes, Santi, Lucélia, Silva, Walter Orlando Beys da, Silveira, Carolina Pereira, Serrano, Thaiane Rispoli, Oliveira, Eder Silva de, Silva, Lívia Kmetzsch Rosa e, Vainstein, Marilene Henning, Vasconcelos, Ana Tereza Ribeiro de, Schrank, Augusto
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/115041
Resumo: Background: Metarhizium anisopliae is an entomopathogenic fungus used in the biological control of some agricultural insect pests, and efforts are underway to use this fungus in the control of insect-borne human diseases. A large repertoire of proteins must be secreted by M. anisopliae to cope with the various available nutrients as this fungus switches through different lifestyles, i.e., from a saprophytic, to an infectious, to a plant endophytic stage. To further evaluate the predicted secretome of M. anisopliae, we employed genomic and transcriptomic analyses, coupled with phylogenomic analysis, focusing on the identification and characterization of secreted proteins. Results: We determined the M. anisopliae E6 genome sequence and compared this sequence to other entomopathogenic fungi genomes. A robust pipeline was generated to evaluate the predicted secretomes of M. anisopliae and 15 other filamentous fungi, leading to the identification of a core of secreted proteins. Transcriptomic analysis using the tick Rhipicephalus microplus cuticle as an infection model during two periods of infection (48 and 144 h) allowed the identification of several differentially expressed genes. This analysis concluded that a large proportion of the predicted secretome coding genes contained altered transcript levels in the conditions analyzed in this study. In addition, some specific secreted proteins from Metarhizium have an evolutionary history similar to orthologs found in Beauveria/Cordyceps. This similarity suggests that a set of secreted proteins has evolved to participate in entomopathogenicity. Conclusions: The data presented represents an important step to the characterization of the role of secreted proteins in the virulence and pathogenicity of M. anisopliae.
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spelling Staats, Charley ChristianJunges, AngelaGuedes, Rafael Lucas MunizThompson, Claudia ElizabethMorais, Guilherme Loss deBoldo, Juliano TomazzoniAlmeida, Luiz Gonzaga Paula deAndreis, Fábio CarrerGerber, Alexandra LehmkuhlOliveira, Nicolau SbarainiPaixão, Rana Louise de Andrade daBroetto, LeonardoLandell, Melissa FontesSanti, LucéliaSilva, Walter Orlando Beys daSilveira, Carolina PereiraSerrano, Thaiane RispoliOliveira, Eder Silva deSilva, Lívia Kmetzsch Rosa eVainstein, Marilene HenningVasconcelos, Ana Tereza Ribeiro deSchrank, Augusto2015-04-08T01:58:47Z2014http://hdl.handle.net/10183/115041000955042Background: Metarhizium anisopliae is an entomopathogenic fungus used in the biological control of some agricultural insect pests, and efforts are underway to use this fungus in the control of insect-borne human diseases. A large repertoire of proteins must be secreted by M. anisopliae to cope with the various available nutrients as this fungus switches through different lifestyles, i.e., from a saprophytic, to an infectious, to a plant endophytic stage. To further evaluate the predicted secretome of M. anisopliae, we employed genomic and transcriptomic analyses, coupled with phylogenomic analysis, focusing on the identification and characterization of secreted proteins. Results: We determined the M. anisopliae E6 genome sequence and compared this sequence to other entomopathogenic fungi genomes. A robust pipeline was generated to evaluate the predicted secretomes of M. anisopliae and 15 other filamentous fungi, leading to the identification of a core of secreted proteins. Transcriptomic analysis using the tick Rhipicephalus microplus cuticle as an infection model during two periods of infection (48 and 144 h) allowed the identification of several differentially expressed genes. This analysis concluded that a large proportion of the predicted secretome coding genes contained altered transcript levels in the conditions analyzed in this study. In addition, some specific secreted proteins from Metarhizium have an evolutionary history similar to orthologs found in Beauveria/Cordyceps. This similarity suggests that a set of secreted proteins has evolved to participate in entomopathogenicity. Conclusions: The data presented represents an important step to the characterization of the role of secreted proteins in the virulence and pathogenicity of M. anisopliae.application/pdfengBMC Genomics. London. Vol. 15, (Sept. 2014), e822, 18 p.Fungo entomopatogenicoGenomaGenome sequenceEntomopathogenic fungiSecretomePhylogenomicsComparative genome analysis of entomopathogenic fungi reveals a complex set of secreted proteinsEstrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSORIGINAL000955042.pdf000955042.pdfTexto completo (inglês)application/pdf2035420http://www.lume.ufrgs.br/bitstream/10183/115041/1/000955042.pdf5446a602966cb4a941d892abe60ad6ceMD51TEXT000955042.pdf.txt000955042.pdf.txtExtracted Texttext/plain92799http://www.lume.ufrgs.br/bitstream/10183/115041/2/000955042.pdf.txt008df53138d5161fc17f873a9a469268MD52THUMBNAIL000955042.pdf.jpg000955042.pdf.jpgGenerated Thumbnailimage/jpeg1752http://www.lume.ufrgs.br/bitstream/10183/115041/3/000955042.pdf.jpg72a861d5d792f2a0b2e57d344ad77476MD5310183/1150412023-07-06 03:53:29.016606oai:www.lume.ufrgs.br:10183/115041Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2023-07-06T06:53:29Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv Comparative genome analysis of entomopathogenic fungi reveals a complex set of secreted proteins
title Comparative genome analysis of entomopathogenic fungi reveals a complex set of secreted proteins
spellingShingle Comparative genome analysis of entomopathogenic fungi reveals a complex set of secreted proteins
Staats, Charley Christian
Fungo entomopatogenico
Genoma
Genome sequence
Entomopathogenic fungi
Secretome
Phylogenomics
title_short Comparative genome analysis of entomopathogenic fungi reveals a complex set of secreted proteins
title_full Comparative genome analysis of entomopathogenic fungi reveals a complex set of secreted proteins
title_fullStr Comparative genome analysis of entomopathogenic fungi reveals a complex set of secreted proteins
title_full_unstemmed Comparative genome analysis of entomopathogenic fungi reveals a complex set of secreted proteins
title_sort Comparative genome analysis of entomopathogenic fungi reveals a complex set of secreted proteins
author Staats, Charley Christian
author_facet Staats, Charley Christian
Junges, Angela
Guedes, Rafael Lucas Muniz
Thompson, Claudia Elizabeth
Morais, Guilherme Loss de
Boldo, Juliano Tomazzoni
Almeida, Luiz Gonzaga Paula de
Andreis, Fábio Carrer
Gerber, Alexandra Lehmkuhl
Oliveira, Nicolau Sbaraini
Paixão, Rana Louise de Andrade da
Broetto, Leonardo
Landell, Melissa Fontes
Santi, Lucélia
Silva, Walter Orlando Beys da
Silveira, Carolina Pereira
Serrano, Thaiane Rispoli
Oliveira, Eder Silva de
Silva, Lívia Kmetzsch Rosa e
Vainstein, Marilene Henning
Vasconcelos, Ana Tereza Ribeiro de
Schrank, Augusto
author_role author
author2 Junges, Angela
Guedes, Rafael Lucas Muniz
Thompson, Claudia Elizabeth
Morais, Guilherme Loss de
Boldo, Juliano Tomazzoni
Almeida, Luiz Gonzaga Paula de
Andreis, Fábio Carrer
Gerber, Alexandra Lehmkuhl
Oliveira, Nicolau Sbaraini
Paixão, Rana Louise de Andrade da
Broetto, Leonardo
Landell, Melissa Fontes
Santi, Lucélia
Silva, Walter Orlando Beys da
Silveira, Carolina Pereira
Serrano, Thaiane Rispoli
Oliveira, Eder Silva de
Silva, Lívia Kmetzsch Rosa e
Vainstein, Marilene Henning
Vasconcelos, Ana Tereza Ribeiro de
Schrank, Augusto
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Staats, Charley Christian
Junges, Angela
Guedes, Rafael Lucas Muniz
Thompson, Claudia Elizabeth
Morais, Guilherme Loss de
Boldo, Juliano Tomazzoni
Almeida, Luiz Gonzaga Paula de
Andreis, Fábio Carrer
Gerber, Alexandra Lehmkuhl
Oliveira, Nicolau Sbaraini
Paixão, Rana Louise de Andrade da
Broetto, Leonardo
Landell, Melissa Fontes
Santi, Lucélia
Silva, Walter Orlando Beys da
Silveira, Carolina Pereira
Serrano, Thaiane Rispoli
Oliveira, Eder Silva de
Silva, Lívia Kmetzsch Rosa e
Vainstein, Marilene Henning
Vasconcelos, Ana Tereza Ribeiro de
Schrank, Augusto
dc.subject.por.fl_str_mv Fungo entomopatogenico
Genoma
topic Fungo entomopatogenico
Genoma
Genome sequence
Entomopathogenic fungi
Secretome
Phylogenomics
dc.subject.eng.fl_str_mv Genome sequence
Entomopathogenic fungi
Secretome
Phylogenomics
description Background: Metarhizium anisopliae is an entomopathogenic fungus used in the biological control of some agricultural insect pests, and efforts are underway to use this fungus in the control of insect-borne human diseases. A large repertoire of proteins must be secreted by M. anisopliae to cope with the various available nutrients as this fungus switches through different lifestyles, i.e., from a saprophytic, to an infectious, to a plant endophytic stage. To further evaluate the predicted secretome of M. anisopliae, we employed genomic and transcriptomic analyses, coupled with phylogenomic analysis, focusing on the identification and characterization of secreted proteins. Results: We determined the M. anisopliae E6 genome sequence and compared this sequence to other entomopathogenic fungi genomes. A robust pipeline was generated to evaluate the predicted secretomes of M. anisopliae and 15 other filamentous fungi, leading to the identification of a core of secreted proteins. Transcriptomic analysis using the tick Rhipicephalus microplus cuticle as an infection model during two periods of infection (48 and 144 h) allowed the identification of several differentially expressed genes. This analysis concluded that a large proportion of the predicted secretome coding genes contained altered transcript levels in the conditions analyzed in this study. In addition, some specific secreted proteins from Metarhizium have an evolutionary history similar to orthologs found in Beauveria/Cordyceps. This similarity suggests that a set of secreted proteins has evolved to participate in entomopathogenicity. Conclusions: The data presented represents an important step to the characterization of the role of secreted proteins in the virulence and pathogenicity of M. anisopliae.
publishDate 2014
dc.date.issued.fl_str_mv 2014
dc.date.accessioned.fl_str_mv 2015-04-08T01:58:47Z
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dc.relation.ispartof.pt_BR.fl_str_mv BMC Genomics. London. Vol. 15, (Sept. 2014), e822, 18 p.
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