Comparative genome analysis of entomopathogenic fungi reveals a complex set of secreted proteins
Autor(a) principal: | |
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Data de Publicação: | 2014 |
Outros Autores: | , , , , , , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UFRGS |
Texto Completo: | http://hdl.handle.net/10183/115041 |
Resumo: | Background: Metarhizium anisopliae is an entomopathogenic fungus used in the biological control of some agricultural insect pests, and efforts are underway to use this fungus in the control of insect-borne human diseases. A large repertoire of proteins must be secreted by M. anisopliae to cope with the various available nutrients as this fungus switches through different lifestyles, i.e., from a saprophytic, to an infectious, to a plant endophytic stage. To further evaluate the predicted secretome of M. anisopliae, we employed genomic and transcriptomic analyses, coupled with phylogenomic analysis, focusing on the identification and characterization of secreted proteins. Results: We determined the M. anisopliae E6 genome sequence and compared this sequence to other entomopathogenic fungi genomes. A robust pipeline was generated to evaluate the predicted secretomes of M. anisopliae and 15 other filamentous fungi, leading to the identification of a core of secreted proteins. Transcriptomic analysis using the tick Rhipicephalus microplus cuticle as an infection model during two periods of infection (48 and 144 h) allowed the identification of several differentially expressed genes. This analysis concluded that a large proportion of the predicted secretome coding genes contained altered transcript levels in the conditions analyzed in this study. In addition, some specific secreted proteins from Metarhizium have an evolutionary history similar to orthologs found in Beauveria/Cordyceps. This similarity suggests that a set of secreted proteins has evolved to participate in entomopathogenicity. Conclusions: The data presented represents an important step to the characterization of the role of secreted proteins in the virulence and pathogenicity of M. anisopliae. |
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Staats, Charley ChristianJunges, AngelaGuedes, Rafael Lucas MunizThompson, Claudia ElizabethMorais, Guilherme Loss deBoldo, Juliano TomazzoniAlmeida, Luiz Gonzaga Paula deAndreis, Fábio CarrerGerber, Alexandra LehmkuhlOliveira, Nicolau SbarainiPaixão, Rana Louise de Andrade daBroetto, LeonardoLandell, Melissa FontesSanti, LucéliaSilva, Walter Orlando Beys daSilveira, Carolina PereiraSerrano, Thaiane RispoliOliveira, Eder Silva deSilva, Lívia Kmetzsch Rosa eVainstein, Marilene HenningVasconcelos, Ana Tereza Ribeiro deSchrank, Augusto2015-04-08T01:58:47Z2014http://hdl.handle.net/10183/115041000955042Background: Metarhizium anisopliae is an entomopathogenic fungus used in the biological control of some agricultural insect pests, and efforts are underway to use this fungus in the control of insect-borne human diseases. A large repertoire of proteins must be secreted by M. anisopliae to cope with the various available nutrients as this fungus switches through different lifestyles, i.e., from a saprophytic, to an infectious, to a plant endophytic stage. To further evaluate the predicted secretome of M. anisopliae, we employed genomic and transcriptomic analyses, coupled with phylogenomic analysis, focusing on the identification and characterization of secreted proteins. Results: We determined the M. anisopliae E6 genome sequence and compared this sequence to other entomopathogenic fungi genomes. A robust pipeline was generated to evaluate the predicted secretomes of M. anisopliae and 15 other filamentous fungi, leading to the identification of a core of secreted proteins. Transcriptomic analysis using the tick Rhipicephalus microplus cuticle as an infection model during two periods of infection (48 and 144 h) allowed the identification of several differentially expressed genes. This analysis concluded that a large proportion of the predicted secretome coding genes contained altered transcript levels in the conditions analyzed in this study. In addition, some specific secreted proteins from Metarhizium have an evolutionary history similar to orthologs found in Beauveria/Cordyceps. This similarity suggests that a set of secreted proteins has evolved to participate in entomopathogenicity. Conclusions: The data presented represents an important step to the characterization of the role of secreted proteins in the virulence and pathogenicity of M. anisopliae.application/pdfengBMC Genomics. London. Vol. 15, (Sept. 2014), e822, 18 p.Fungo entomopatogenicoGenomaGenome sequenceEntomopathogenic fungiSecretomePhylogenomicsComparative genome analysis of entomopathogenic fungi reveals a complex set of secreted proteinsEstrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSORIGINAL000955042.pdf000955042.pdfTexto completo (inglês)application/pdf2035420http://www.lume.ufrgs.br/bitstream/10183/115041/1/000955042.pdf5446a602966cb4a941d892abe60ad6ceMD51TEXT000955042.pdf.txt000955042.pdf.txtExtracted Texttext/plain92799http://www.lume.ufrgs.br/bitstream/10183/115041/2/000955042.pdf.txt008df53138d5161fc17f873a9a469268MD52THUMBNAIL000955042.pdf.jpg000955042.pdf.jpgGenerated Thumbnailimage/jpeg1752http://www.lume.ufrgs.br/bitstream/10183/115041/3/000955042.pdf.jpg72a861d5d792f2a0b2e57d344ad77476MD5310183/1150412023-07-06 03:53:29.016606oai:www.lume.ufrgs.br:10183/115041Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2023-07-06T06:53:29Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false |
dc.title.pt_BR.fl_str_mv |
Comparative genome analysis of entomopathogenic fungi reveals a complex set of secreted proteins |
title |
Comparative genome analysis of entomopathogenic fungi reveals a complex set of secreted proteins |
spellingShingle |
Comparative genome analysis of entomopathogenic fungi reveals a complex set of secreted proteins Staats, Charley Christian Fungo entomopatogenico Genoma Genome sequence Entomopathogenic fungi Secretome Phylogenomics |
title_short |
Comparative genome analysis of entomopathogenic fungi reveals a complex set of secreted proteins |
title_full |
Comparative genome analysis of entomopathogenic fungi reveals a complex set of secreted proteins |
title_fullStr |
Comparative genome analysis of entomopathogenic fungi reveals a complex set of secreted proteins |
title_full_unstemmed |
Comparative genome analysis of entomopathogenic fungi reveals a complex set of secreted proteins |
title_sort |
Comparative genome analysis of entomopathogenic fungi reveals a complex set of secreted proteins |
author |
Staats, Charley Christian |
author_facet |
Staats, Charley Christian Junges, Angela Guedes, Rafael Lucas Muniz Thompson, Claudia Elizabeth Morais, Guilherme Loss de Boldo, Juliano Tomazzoni Almeida, Luiz Gonzaga Paula de Andreis, Fábio Carrer Gerber, Alexandra Lehmkuhl Oliveira, Nicolau Sbaraini Paixão, Rana Louise de Andrade da Broetto, Leonardo Landell, Melissa Fontes Santi, Lucélia Silva, Walter Orlando Beys da Silveira, Carolina Pereira Serrano, Thaiane Rispoli Oliveira, Eder Silva de Silva, Lívia Kmetzsch Rosa e Vainstein, Marilene Henning Vasconcelos, Ana Tereza Ribeiro de Schrank, Augusto |
author_role |
author |
author2 |
Junges, Angela Guedes, Rafael Lucas Muniz Thompson, Claudia Elizabeth Morais, Guilherme Loss de Boldo, Juliano Tomazzoni Almeida, Luiz Gonzaga Paula de Andreis, Fábio Carrer Gerber, Alexandra Lehmkuhl Oliveira, Nicolau Sbaraini Paixão, Rana Louise de Andrade da Broetto, Leonardo Landell, Melissa Fontes Santi, Lucélia Silva, Walter Orlando Beys da Silveira, Carolina Pereira Serrano, Thaiane Rispoli Oliveira, Eder Silva de Silva, Lívia Kmetzsch Rosa e Vainstein, Marilene Henning Vasconcelos, Ana Tereza Ribeiro de Schrank, Augusto |
author2_role |
author author author author author author author author author author author author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Staats, Charley Christian Junges, Angela Guedes, Rafael Lucas Muniz Thompson, Claudia Elizabeth Morais, Guilherme Loss de Boldo, Juliano Tomazzoni Almeida, Luiz Gonzaga Paula de Andreis, Fábio Carrer Gerber, Alexandra Lehmkuhl Oliveira, Nicolau Sbaraini Paixão, Rana Louise de Andrade da Broetto, Leonardo Landell, Melissa Fontes Santi, Lucélia Silva, Walter Orlando Beys da Silveira, Carolina Pereira Serrano, Thaiane Rispoli Oliveira, Eder Silva de Silva, Lívia Kmetzsch Rosa e Vainstein, Marilene Henning Vasconcelos, Ana Tereza Ribeiro de Schrank, Augusto |
dc.subject.por.fl_str_mv |
Fungo entomopatogenico Genoma |
topic |
Fungo entomopatogenico Genoma Genome sequence Entomopathogenic fungi Secretome Phylogenomics |
dc.subject.eng.fl_str_mv |
Genome sequence Entomopathogenic fungi Secretome Phylogenomics |
description |
Background: Metarhizium anisopliae is an entomopathogenic fungus used in the biological control of some agricultural insect pests, and efforts are underway to use this fungus in the control of insect-borne human diseases. A large repertoire of proteins must be secreted by M. anisopliae to cope with the various available nutrients as this fungus switches through different lifestyles, i.e., from a saprophytic, to an infectious, to a plant endophytic stage. To further evaluate the predicted secretome of M. anisopliae, we employed genomic and transcriptomic analyses, coupled with phylogenomic analysis, focusing on the identification and characterization of secreted proteins. Results: We determined the M. anisopliae E6 genome sequence and compared this sequence to other entomopathogenic fungi genomes. A robust pipeline was generated to evaluate the predicted secretomes of M. anisopliae and 15 other filamentous fungi, leading to the identification of a core of secreted proteins. Transcriptomic analysis using the tick Rhipicephalus microplus cuticle as an infection model during two periods of infection (48 and 144 h) allowed the identification of several differentially expressed genes. This analysis concluded that a large proportion of the predicted secretome coding genes contained altered transcript levels in the conditions analyzed in this study. In addition, some specific secreted proteins from Metarhizium have an evolutionary history similar to orthologs found in Beauveria/Cordyceps. This similarity suggests that a set of secreted proteins has evolved to participate in entomopathogenicity. Conclusions: The data presented represents an important step to the characterization of the role of secreted proteins in the virulence and pathogenicity of M. anisopliae. |
publishDate |
2014 |
dc.date.issued.fl_str_mv |
2014 |
dc.date.accessioned.fl_str_mv |
2015-04-08T01:58:47Z |
dc.type.driver.fl_str_mv |
Estrangeiro info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
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publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10183/115041 |
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dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.ispartof.pt_BR.fl_str_mv |
BMC Genomics. London. Vol. 15, (Sept. 2014), e822, 18 p. |
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openAccess |
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