Phenotypic and genotypic characterization of Salmonella enteritidis isolates

Detalhes bibliográficos
Autor(a) principal: Oliveira, Sílvia Dias de
Data de Publicação: 2007
Outros Autores: Bessa, Marjô Cadó, Santos, Luciana Ruschel dos, Cardoso, Marisa Ribeiro de Itapema, Brandelli, Adriano, Canal, Cláudio Wageck
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/20537
Resumo: In order to study the epidemiology of Salmonella Enteritidis outbreaks and determine the source of contamination so that a recurrence can be avoided, detailed characterization is necessary. Thus, the purpose of this study was to verify whether rep-PCR was able to discriminate among Salmonella Enteritidis isolates. Phage typing, detection of virulence genes and antimicrobial resistance testing were also associated to rep- PCR results. One hundred and two S. Enteritidis isolates from broiler carcasses, food, human, pigs, poultryrelated samples, and nine isolates from other countries were genotypically typed by REP-PCR, ERIC-PCR and BOX-PCR, collectively called rep-PCR. Phage typing, detection of virulence genes and antimicrobial resistance testing were also performed. Only three fingerprinting profiles were obtained with each rep-PCR method, with the majority of isolates belonging to the same profile. No relationship was observed between genotypic profile and year, place of isolation or source of infection. However, the less frequent rep-PCR profiles showed single antimicrobial resistance patterns. Although few strains isolated from swine were analyzed, different antimicrobial resistance patterns were observed. Furthermore, phage type 4 was not found in swine isolates. rep-PCR showed a lower discriminatory power as compared with antimicrobial resistance and phage typing, but the combination of genotypic and phenotypic methods was more discriminatory than any method alone, resulting in 48 different types.
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spelling Oliveira, Sílvia Dias deBessa, Marjô CadóSantos, Luciana Ruschel dosCardoso, Marisa Ribeiro de ItapemaBrandelli, AdrianoCanal, Cláudio Wageck2010-04-16T09:15:21Z20071517-8382http://hdl.handle.net/10183/20537000630385In order to study the epidemiology of Salmonella Enteritidis outbreaks and determine the source of contamination so that a recurrence can be avoided, detailed characterization is necessary. Thus, the purpose of this study was to verify whether rep-PCR was able to discriminate among Salmonella Enteritidis isolates. Phage typing, detection of virulence genes and antimicrobial resistance testing were also associated to rep- PCR results. One hundred and two S. Enteritidis isolates from broiler carcasses, food, human, pigs, poultryrelated samples, and nine isolates from other countries were genotypically typed by REP-PCR, ERIC-PCR and BOX-PCR, collectively called rep-PCR. Phage typing, detection of virulence genes and antimicrobial resistance testing were also performed. Only three fingerprinting profiles were obtained with each rep-PCR method, with the majority of isolates belonging to the same profile. No relationship was observed between genotypic profile and year, place of isolation or source of infection. However, the less frequent rep-PCR profiles showed single antimicrobial resistance patterns. Although few strains isolated from swine were analyzed, different antimicrobial resistance patterns were observed. Furthermore, phage type 4 was not found in swine isolates. rep-PCR showed a lower discriminatory power as compared with antimicrobial resistance and phage typing, but the combination of genotypic and phenotypic methods was more discriminatory than any method alone, resulting in 48 different types.application/pdfengBrazilian journal of microbiology. São Paulo. Vol. 38, n. 4 (oct./dec. 2007), p. 720-728Salmonella enteritidisSalmonella EnteritidisRep-PCRPhage typingAntimicrobial resistanceVirulence genesPhenotypic and genotypic characterization of Salmonella enteritidis isolatesinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/otherinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSORIGINAL000630385.pdf000630385.pdfTexto completo (inglês)application/pdf209793http://www.lume.ufrgs.br/bitstream/10183/20537/1/000630385.pdfc7a8dde72ea2dcac38d485144da0a046MD51TEXT000630385.pdf.txt000630385.pdf.txtExtracted Texttext/plain40648http://www.lume.ufrgs.br/bitstream/10183/20537/2/000630385.pdf.txtf43750490f5e7547843effb16c77f715MD52THUMBNAIL000630385.pdf.jpg000630385.pdf.jpgGenerated Thumbnailimage/jpeg1763http://www.lume.ufrgs.br/bitstream/10183/20537/3/000630385.pdf.jpgdfeafb9aeb702c22863b807a17967f16MD5310183/205372018-10-08 09:14:29.021oai:www.lume.ufrgs.br:10183/20537Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2018-10-08T12:14:29Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv Phenotypic and genotypic characterization of Salmonella enteritidis isolates
title Phenotypic and genotypic characterization of Salmonella enteritidis isolates
spellingShingle Phenotypic and genotypic characterization of Salmonella enteritidis isolates
Oliveira, Sílvia Dias de
Salmonella enteritidis
Salmonella Enteritidis
Rep-PCR
Phage typing
Antimicrobial resistance
Virulence genes
title_short Phenotypic and genotypic characterization of Salmonella enteritidis isolates
title_full Phenotypic and genotypic characterization of Salmonella enteritidis isolates
title_fullStr Phenotypic and genotypic characterization of Salmonella enteritidis isolates
title_full_unstemmed Phenotypic and genotypic characterization of Salmonella enteritidis isolates
title_sort Phenotypic and genotypic characterization of Salmonella enteritidis isolates
author Oliveira, Sílvia Dias de
author_facet Oliveira, Sílvia Dias de
Bessa, Marjô Cadó
Santos, Luciana Ruschel dos
Cardoso, Marisa Ribeiro de Itapema
Brandelli, Adriano
Canal, Cláudio Wageck
author_role author
author2 Bessa, Marjô Cadó
Santos, Luciana Ruschel dos
Cardoso, Marisa Ribeiro de Itapema
Brandelli, Adriano
Canal, Cláudio Wageck
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Oliveira, Sílvia Dias de
Bessa, Marjô Cadó
Santos, Luciana Ruschel dos
Cardoso, Marisa Ribeiro de Itapema
Brandelli, Adriano
Canal, Cláudio Wageck
dc.subject.por.fl_str_mv Salmonella enteritidis
topic Salmonella enteritidis
Salmonella Enteritidis
Rep-PCR
Phage typing
Antimicrobial resistance
Virulence genes
dc.subject.eng.fl_str_mv Salmonella Enteritidis
Rep-PCR
Phage typing
Antimicrobial resistance
Virulence genes
description In order to study the epidemiology of Salmonella Enteritidis outbreaks and determine the source of contamination so that a recurrence can be avoided, detailed characterization is necessary. Thus, the purpose of this study was to verify whether rep-PCR was able to discriminate among Salmonella Enteritidis isolates. Phage typing, detection of virulence genes and antimicrobial resistance testing were also associated to rep- PCR results. One hundred and two S. Enteritidis isolates from broiler carcasses, food, human, pigs, poultryrelated samples, and nine isolates from other countries were genotypically typed by REP-PCR, ERIC-PCR and BOX-PCR, collectively called rep-PCR. Phage typing, detection of virulence genes and antimicrobial resistance testing were also performed. Only three fingerprinting profiles were obtained with each rep-PCR method, with the majority of isolates belonging to the same profile. No relationship was observed between genotypic profile and year, place of isolation or source of infection. However, the less frequent rep-PCR profiles showed single antimicrobial resistance patterns. Although few strains isolated from swine were analyzed, different antimicrobial resistance patterns were observed. Furthermore, phage type 4 was not found in swine isolates. rep-PCR showed a lower discriminatory power as compared with antimicrobial resistance and phage typing, but the combination of genotypic and phenotypic methods was more discriminatory than any method alone, resulting in 48 different types.
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dc.relation.ispartof.pt_BR.fl_str_mv Brazilian journal of microbiology. São Paulo. Vol. 38, n. 4 (oct./dec. 2007), p. 720-728
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