Circulation of Dengue virus serotype 1 genotype V and Dengue virus serotype 2 genotype III in Tocantins state, Northern Brazil, 2021–2022

Detalhes bibliográficos
Autor(a) principal: Souza, Ueric José Borges de
Data de Publicação: 2023
Outros Autores: Macêdo, Ygor da Silva Miranda, Santos, Raíssa Nunes dos, Cardoso, Francisco Dias Pereira, Galvão, Jucimária Dantas, Gabev, Evgeni Evgeniev, Franco, Ana Claudia, Roehe, Paulo Michel, Spilki, Fernando Rosado, Campos, Fabrício Souza
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/267204
Resumo: In Brazil, the state of Tocantins, located in north-central Brazil, has experienced a significant number of cases of arboviral disease, particularly Dengue virus (DENV). This study aimed to deepen the knowledge on DENV circulation within that state by conducting full genome sequencing of viral genomes recovered from 61 patients between June 2021 and July 2022. There were a total of 8807 and 20,692 cases in 2021 and 2022, respectively, as reported by the state’s Secretary of Health. Nucleotide sequencing confirmed the circulation of DENV serotype 1, genotype V and DENV serotype 2, genotype III in the State. Younger age groups (4 to 43 years old) were mostly affected; however, no significant differences were detected regarding the gender distribution of cases in humans. Phylogenetic analysis revealed that the circulating viruses belong to DENV-1 genotype V American and DENV-2 genotype III Southeast Asian/American. The Bayesian analysis of DENV-1 genotype V genomes sequenced here are closely related to genomes previously sequenced in the state of São Paulo. Regarding the DENV-2 genotype III genomes, these clustered in a distinct, well-supported subclade, along with previously reported isolates from the states of Goiás and São Paulo. The findings reported here suggest that multiple introductions of these genotypes occurred in the Tocantins state. This observation highlights the importance of major population centers in Brazil on virus dispersion, such as those observed in other Latin American and North American countries. In the SNP analysis, DENV-1 displayed 122 distinct missense mutations, while DENV-2 had 44, with significant mutations predominantly occurring in the envelope and NS5 proteins. The analyses performed here highlight the concomitant circulation of distinct DENV-1 and -2 genotypes in some Brazilian states, underscoring the dynamic evolution of DENV and the relevance of surveillance efforts in supporting public health policies.
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spelling Souza, Ueric José Borges deMacêdo, Ygor da Silva MirandaSantos, Raíssa Nunes dosCardoso, Francisco Dias PereiraGalvão, Jucimária DantasGabev, Evgeni EvgenievFranco, Ana ClaudiaRoehe, Paulo MichelSpilki, Fernando RosadoCampos, Fabrício Souza2023-11-18T03:24:14Z20231999-4915http://hdl.handle.net/10183/267204001187424In Brazil, the state of Tocantins, located in north-central Brazil, has experienced a significant number of cases of arboviral disease, particularly Dengue virus (DENV). This study aimed to deepen the knowledge on DENV circulation within that state by conducting full genome sequencing of viral genomes recovered from 61 patients between June 2021 and July 2022. There were a total of 8807 and 20,692 cases in 2021 and 2022, respectively, as reported by the state’s Secretary of Health. Nucleotide sequencing confirmed the circulation of DENV serotype 1, genotype V and DENV serotype 2, genotype III in the State. Younger age groups (4 to 43 years old) were mostly affected; however, no significant differences were detected regarding the gender distribution of cases in humans. Phylogenetic analysis revealed that the circulating viruses belong to DENV-1 genotype V American and DENV-2 genotype III Southeast Asian/American. The Bayesian analysis of DENV-1 genotype V genomes sequenced here are closely related to genomes previously sequenced in the state of São Paulo. Regarding the DENV-2 genotype III genomes, these clustered in a distinct, well-supported subclade, along with previously reported isolates from the states of Goiás and São Paulo. The findings reported here suggest that multiple introductions of these genotypes occurred in the Tocantins state. This observation highlights the importance of major population centers in Brazil on virus dispersion, such as those observed in other Latin American and North American countries. In the SNP analysis, DENV-1 displayed 122 distinct missense mutations, while DENV-2 had 44, with significant mutations predominantly occurring in the envelope and NS5 proteins. The analyses performed here highlight the concomitant circulation of distinct DENV-1 and -2 genotypes in some Brazilian states, underscoring the dynamic evolution of DENV and the relevance of surveillance efforts in supporting public health policies.application/pdfengViruses. Basel. Vol. 15, no. 11 (Oct. 2023), 2136, 18 p.Vigilância em saúde públicaVigilância sanitáriaVírus da dengueArbovírusSequenciamento completo do genomaPolítica de saúdeDENVGenomic surveillanceMolecular clockArbovirusesCirculation of Dengue virus serotype 1 genotype V and Dengue virus serotype 2 genotype III in Tocantins state, Northern Brazil, 2021–2022Estrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSTEXT001187424.pdf.txt001187424.pdf.txtExtracted Texttext/plain72531http://www.lume.ufrgs.br/bitstream/10183/267204/2/001187424.pdf.txt24c933e4c06248c8cb80654c9efb0e2bMD52ORIGINAL001187424.pdfTexto completo (inglês)application/pdf3928130http://www.lume.ufrgs.br/bitstream/10183/267204/1/001187424.pdfab0d040845214548a5bc52d86dae9452MD5110183/2672042023-11-19 04:21:00.710409oai:www.lume.ufrgs.br:10183/267204Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2023-11-19T06:21Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv Circulation of Dengue virus serotype 1 genotype V and Dengue virus serotype 2 genotype III in Tocantins state, Northern Brazil, 2021–2022
title Circulation of Dengue virus serotype 1 genotype V and Dengue virus serotype 2 genotype III in Tocantins state, Northern Brazil, 2021–2022
spellingShingle Circulation of Dengue virus serotype 1 genotype V and Dengue virus serotype 2 genotype III in Tocantins state, Northern Brazil, 2021–2022
Souza, Ueric José Borges de
Vigilância em saúde pública
Vigilância sanitária
Vírus da dengue
Arbovírus
Sequenciamento completo do genoma
Política de saúde
DENV
Genomic surveillance
Molecular clock
Arboviruses
title_short Circulation of Dengue virus serotype 1 genotype V and Dengue virus serotype 2 genotype III in Tocantins state, Northern Brazil, 2021–2022
title_full Circulation of Dengue virus serotype 1 genotype V and Dengue virus serotype 2 genotype III in Tocantins state, Northern Brazil, 2021–2022
title_fullStr Circulation of Dengue virus serotype 1 genotype V and Dengue virus serotype 2 genotype III in Tocantins state, Northern Brazil, 2021–2022
title_full_unstemmed Circulation of Dengue virus serotype 1 genotype V and Dengue virus serotype 2 genotype III in Tocantins state, Northern Brazil, 2021–2022
title_sort Circulation of Dengue virus serotype 1 genotype V and Dengue virus serotype 2 genotype III in Tocantins state, Northern Brazil, 2021–2022
author Souza, Ueric José Borges de
author_facet Souza, Ueric José Borges de
Macêdo, Ygor da Silva Miranda
Santos, Raíssa Nunes dos
Cardoso, Francisco Dias Pereira
Galvão, Jucimária Dantas
Gabev, Evgeni Evgeniev
Franco, Ana Claudia
Roehe, Paulo Michel
Spilki, Fernando Rosado
Campos, Fabrício Souza
author_role author
author2 Macêdo, Ygor da Silva Miranda
Santos, Raíssa Nunes dos
Cardoso, Francisco Dias Pereira
Galvão, Jucimária Dantas
Gabev, Evgeni Evgeniev
Franco, Ana Claudia
Roehe, Paulo Michel
Spilki, Fernando Rosado
Campos, Fabrício Souza
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Souza, Ueric José Borges de
Macêdo, Ygor da Silva Miranda
Santos, Raíssa Nunes dos
Cardoso, Francisco Dias Pereira
Galvão, Jucimária Dantas
Gabev, Evgeni Evgeniev
Franco, Ana Claudia
Roehe, Paulo Michel
Spilki, Fernando Rosado
Campos, Fabrício Souza
dc.subject.por.fl_str_mv Vigilância em saúde pública
Vigilância sanitária
Vírus da dengue
Arbovírus
Sequenciamento completo do genoma
Política de saúde
topic Vigilância em saúde pública
Vigilância sanitária
Vírus da dengue
Arbovírus
Sequenciamento completo do genoma
Política de saúde
DENV
Genomic surveillance
Molecular clock
Arboviruses
dc.subject.eng.fl_str_mv DENV
Genomic surveillance
Molecular clock
Arboviruses
description In Brazil, the state of Tocantins, located in north-central Brazil, has experienced a significant number of cases of arboviral disease, particularly Dengue virus (DENV). This study aimed to deepen the knowledge on DENV circulation within that state by conducting full genome sequencing of viral genomes recovered from 61 patients between June 2021 and July 2022. There were a total of 8807 and 20,692 cases in 2021 and 2022, respectively, as reported by the state’s Secretary of Health. Nucleotide sequencing confirmed the circulation of DENV serotype 1, genotype V and DENV serotype 2, genotype III in the State. Younger age groups (4 to 43 years old) were mostly affected; however, no significant differences were detected regarding the gender distribution of cases in humans. Phylogenetic analysis revealed that the circulating viruses belong to DENV-1 genotype V American and DENV-2 genotype III Southeast Asian/American. The Bayesian analysis of DENV-1 genotype V genomes sequenced here are closely related to genomes previously sequenced in the state of São Paulo. Regarding the DENV-2 genotype III genomes, these clustered in a distinct, well-supported subclade, along with previously reported isolates from the states of Goiás and São Paulo. The findings reported here suggest that multiple introductions of these genotypes occurred in the Tocantins state. This observation highlights the importance of major population centers in Brazil on virus dispersion, such as those observed in other Latin American and North American countries. In the SNP analysis, DENV-1 displayed 122 distinct missense mutations, while DENV-2 had 44, with significant mutations predominantly occurring in the envelope and NS5 proteins. The analyses performed here highlight the concomitant circulation of distinct DENV-1 and -2 genotypes in some Brazilian states, underscoring the dynamic evolution of DENV and the relevance of surveillance efforts in supporting public health policies.
publishDate 2023
dc.date.accessioned.fl_str_mv 2023-11-18T03:24:14Z
dc.date.issued.fl_str_mv 2023
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dc.relation.ispartof.pt_BR.fl_str_mv Viruses. Basel. Vol. 15, no. 11 (Oct. 2023), 2136, 18 p.
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