Nuclear Morphometric Analysis (NMA) : screening of senescence, apoptosis and nuclear irregularities
Autor(a) principal: | |
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Data de Publicação: | 2012 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UFRGS |
Texto Completo: | http://hdl.handle.net/10183/179997 |
Resumo: | Several cellular mechanisms affect nuclear morphology which can therefore be used to assess certain processes. Here, we present an analytic tool to quantify the number of cells in a population that present characteristics of senescence, apoptosis or nuclear irregularities through nuclear morphometric analysis. The tool presented here is based on nuclear image analysis and evaluation of size and regularity of adhered cells in culture. From 46 measurements of nuclear morphometry, principal component analysis filtered four measurements that best separated regular from irregular nuclei. These measurements, namely aspect, area box, radius ratio and roundness were combined into a single nuclear irregularity index (NII). Normal nuclei are used to set the parameters for a given cell type, and different nuclear phenotypes are separated in an area versus Nll plot. The tool was validated with B-gal staining for senescence and annexin or caspases inhibitor for apoptosis as well as severa I treatments that induce different cellular phenotypes. This method provides a direct and objective way of screening normal, senescent, apoptotic and nuclear irregularities which may occur during failed mitosis or mitotic catastrophe, which may be very useful in basic and clinicai research. |
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Chiela, Eduardo Cremonese FilippiOliveira Neto, Manuel Menezes deJurkovski, BrunoCallegari-Jacques, Sidia MariaSilva, Vinícius Duval daLenz, Guido2018-07-03T02:25:37Z20121932-6203http://hdl.handle.net/10183/179997000856974Several cellular mechanisms affect nuclear morphology which can therefore be used to assess certain processes. Here, we present an analytic tool to quantify the number of cells in a population that present characteristics of senescence, apoptosis or nuclear irregularities through nuclear morphometric analysis. The tool presented here is based on nuclear image analysis and evaluation of size and regularity of adhered cells in culture. From 46 measurements of nuclear morphometry, principal component analysis filtered four measurements that best separated regular from irregular nuclei. These measurements, namely aspect, area box, radius ratio and roundness were combined into a single nuclear irregularity index (NII). Normal nuclei are used to set the parameters for a given cell type, and different nuclear phenotypes are separated in an area versus Nll plot. The tool was validated with B-gal staining for senescence and annexin or caspases inhibitor for apoptosis as well as severa I treatments that induce different cellular phenotypes. This method provides a direct and objective way of screening normal, senescent, apoptotic and nuclear irregularities which may occur during failed mitosis or mitotic catastrophe, which may be very useful in basic and clinicai research.application/pdfengPLoS ONE. San Francisco. Vol. 7, no. 8 (Aug. 2012), p. e42522, 10 p.Estatistica : Analise de dadosBiologia celularNuclear Morphometric Analysis (NMA) : screening of senescence, apoptosis and nuclear irregularitiesEstrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSORIGINAL000856974.pdf000856974.pdfTexto completo (inglês)application/pdf2608722http://www.lume.ufrgs.br/bitstream/10183/179997/1/000856974.pdf105dc4aa3fc8af2c51323bc760f891a1MD51TEXT000856974.pdf.txt000856974.pdf.txtExtracted Texttext/plain11http://www.lume.ufrgs.br/bitstream/10183/179997/2/000856974.pdf.txt32b899f1fc06999dcf2d41745950fdf3MD5210183/1799972024-05-23 06:43:20.547613oai:www.lume.ufrgs.br:10183/179997Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2024-05-23T09:43:20Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false |
dc.title.pt_BR.fl_str_mv |
Nuclear Morphometric Analysis (NMA) : screening of senescence, apoptosis and nuclear irregularities |
title |
Nuclear Morphometric Analysis (NMA) : screening of senescence, apoptosis and nuclear irregularities |
spellingShingle |
Nuclear Morphometric Analysis (NMA) : screening of senescence, apoptosis and nuclear irregularities Chiela, Eduardo Cremonese Filippi Estatistica : Analise de dados Biologia celular |
title_short |
Nuclear Morphometric Analysis (NMA) : screening of senescence, apoptosis and nuclear irregularities |
title_full |
Nuclear Morphometric Analysis (NMA) : screening of senescence, apoptosis and nuclear irregularities |
title_fullStr |
Nuclear Morphometric Analysis (NMA) : screening of senescence, apoptosis and nuclear irregularities |
title_full_unstemmed |
Nuclear Morphometric Analysis (NMA) : screening of senescence, apoptosis and nuclear irregularities |
title_sort |
Nuclear Morphometric Analysis (NMA) : screening of senescence, apoptosis and nuclear irregularities |
author |
Chiela, Eduardo Cremonese Filippi |
author_facet |
Chiela, Eduardo Cremonese Filippi Oliveira Neto, Manuel Menezes de Jurkovski, Bruno Callegari-Jacques, Sidia Maria Silva, Vinícius Duval da Lenz, Guido |
author_role |
author |
author2 |
Oliveira Neto, Manuel Menezes de Jurkovski, Bruno Callegari-Jacques, Sidia Maria Silva, Vinícius Duval da Lenz, Guido |
author2_role |
author author author author author |
dc.contributor.author.fl_str_mv |
Chiela, Eduardo Cremonese Filippi Oliveira Neto, Manuel Menezes de Jurkovski, Bruno Callegari-Jacques, Sidia Maria Silva, Vinícius Duval da Lenz, Guido |
dc.subject.por.fl_str_mv |
Estatistica : Analise de dados Biologia celular |
topic |
Estatistica : Analise de dados Biologia celular |
description |
Several cellular mechanisms affect nuclear morphology which can therefore be used to assess certain processes. Here, we present an analytic tool to quantify the number of cells in a population that present characteristics of senescence, apoptosis or nuclear irregularities through nuclear morphometric analysis. The tool presented here is based on nuclear image analysis and evaluation of size and regularity of adhered cells in culture. From 46 measurements of nuclear morphometry, principal component analysis filtered four measurements that best separated regular from irregular nuclei. These measurements, namely aspect, area box, radius ratio and roundness were combined into a single nuclear irregularity index (NII). Normal nuclei are used to set the parameters for a given cell type, and different nuclear phenotypes are separated in an area versus Nll plot. The tool was validated with B-gal staining for senescence and annexin or caspases inhibitor for apoptosis as well as severa I treatments that induce different cellular phenotypes. This method provides a direct and objective way of screening normal, senescent, apoptotic and nuclear irregularities which may occur during failed mitosis or mitotic catastrophe, which may be very useful in basic and clinicai research. |
publishDate |
2012 |
dc.date.issued.fl_str_mv |
2012 |
dc.date.accessioned.fl_str_mv |
2018-07-03T02:25:37Z |
dc.type.driver.fl_str_mv |
Estrangeiro info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10183/179997 |
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1932-6203 |
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000856974 |
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http://hdl.handle.net/10183/179997 |
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eng |
language |
eng |
dc.relation.ispartof.pt_BR.fl_str_mv |
PLoS ONE. San Francisco. Vol. 7, no. 8 (Aug. 2012), p. e42522, 10 p. |
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info:eu-repo/semantics/openAccess |
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openAccess |
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