Homo sapiens, Homo neanderthalensis and the Denisova specimen : New insights on their evolutionary histories using whole-genome comparisons

Detalhes bibliográficos
Autor(a) principal: Paixão Côrtes, Vanessa Rodrigues
Data de Publicação: 2012
Outros Autores: Viscardi, Lucas Henriques, Salzano, Francisco Mauro, Hunemeier, Tábita, Bortolini, Maria Cátira
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/87817
Resumo: After a brief review of the most recent findings in the study of human evolution, an extensive comparison of the complete genomes of our nearest relative, the chimpanzee (Pan troglodytes), of extant Homo sapiens, archaic Homo neanderthalensis and the Denisova specimen were made. The focus was on non-synonymous mutations, which consequently had an impact on protein levels and these changes were classified according to degree of effect. A total of 10,447 non-synonymous substitutions were found in which the derived allele is fixed or nearly fixed in humans as compared to chimpanzee. Their most frequent location was on chromosome 21. Their presence was then searched in the two archaic genomes. Mutations in 381 genes would imply radical amino acid changes, with a fraction of these related to olfaction and other important physiological processes. Eight new alleles were identified in the Neanderthal and/or Denisova genetic pools. Four others, possibly affecting cognition, occured both in the sapiens and two other archaic genomes. The selective sweep that gave rise to Homo sapiens could, therefore, have initiated before the modern/archaic human divergence.
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spelling Paixão Côrtes, Vanessa RodriguesViscardi, Lucas HenriquesSalzano, Francisco MauroHunemeier, TábitaBortolini, Maria Cátira2014-02-27T01:50:54Z20121415-4757http://hdl.handle.net/10183/87817000871249After a brief review of the most recent findings in the study of human evolution, an extensive comparison of the complete genomes of our nearest relative, the chimpanzee (Pan troglodytes), of extant Homo sapiens, archaic Homo neanderthalensis and the Denisova specimen were made. The focus was on non-synonymous mutations, which consequently had an impact on protein levels and these changes were classified according to degree of effect. A total of 10,447 non-synonymous substitutions were found in which the derived allele is fixed or nearly fixed in humans as compared to chimpanzee. Their most frequent location was on chromosome 21. Their presence was then searched in the two archaic genomes. Mutations in 381 genes would imply radical amino acid changes, with a fraction of these related to olfaction and other important physiological processes. Eight new alleles were identified in the Neanderthal and/or Denisova genetic pools. Four others, possibly affecting cognition, occured both in the sapiens and two other archaic genomes. The selective sweep that gave rise to Homo sapiens could, therefore, have initiated before the modern/archaic human divergence.application/pdfengGenetics and molecular biology. Ribeirão Preto, SP. Vol. 35, n. 4 supl (2012), p. 904-911Evolução humanaGenômicaSeleção naturalHomo sapiensNeandertalDenisovahuman evolutioncomparative genomicspositive selectionNeanderthalDenisovaHomo sapiens, Homo neanderthalensis and the Denisova specimen : New insights on their evolutionary histories using whole-genome comparisonsinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/otherinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSORIGINAL000871249.pdf000871249.pdfTexto completo (inglês)application/pdf559977http://www.lume.ufrgs.br/bitstream/10183/87817/1/000871249.pdf3921ae549e5fd116670b3efc467c8bd6MD51TEXT000871249.pdf.txt000871249.pdf.txtExtracted Texttext/plain47911http://www.lume.ufrgs.br/bitstream/10183/87817/2/000871249.pdf.txt9d09485b060eca3551590b642997f5d3MD52THUMBNAIL000871249.pdf.jpg000871249.pdf.jpgGenerated Thumbnailimage/jpeg1870http://www.lume.ufrgs.br/bitstream/10183/87817/3/000871249.pdf.jpgac239646a1cfb74a0c80778aa4e0c815MD5310183/878172021-07-09 04:34:21.643708oai:www.lume.ufrgs.br:10183/87817Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2021-07-09T07:34:21Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv Homo sapiens, Homo neanderthalensis and the Denisova specimen : New insights on their evolutionary histories using whole-genome comparisons
title Homo sapiens, Homo neanderthalensis and the Denisova specimen : New insights on their evolutionary histories using whole-genome comparisons
spellingShingle Homo sapiens, Homo neanderthalensis and the Denisova specimen : New insights on their evolutionary histories using whole-genome comparisons
Paixão Côrtes, Vanessa Rodrigues
Evolução humana
Genômica
Seleção natural
Homo sapiens
Neandertal
Denisova
human evolution
comparative genomics
positive selection
Neanderthal
Denisova
title_short Homo sapiens, Homo neanderthalensis and the Denisova specimen : New insights on their evolutionary histories using whole-genome comparisons
title_full Homo sapiens, Homo neanderthalensis and the Denisova specimen : New insights on their evolutionary histories using whole-genome comparisons
title_fullStr Homo sapiens, Homo neanderthalensis and the Denisova specimen : New insights on their evolutionary histories using whole-genome comparisons
title_full_unstemmed Homo sapiens, Homo neanderthalensis and the Denisova specimen : New insights on their evolutionary histories using whole-genome comparisons
title_sort Homo sapiens, Homo neanderthalensis and the Denisova specimen : New insights on their evolutionary histories using whole-genome comparisons
author Paixão Côrtes, Vanessa Rodrigues
author_facet Paixão Côrtes, Vanessa Rodrigues
Viscardi, Lucas Henriques
Salzano, Francisco Mauro
Hunemeier, Tábita
Bortolini, Maria Cátira
author_role author
author2 Viscardi, Lucas Henriques
Salzano, Francisco Mauro
Hunemeier, Tábita
Bortolini, Maria Cátira
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Paixão Côrtes, Vanessa Rodrigues
Viscardi, Lucas Henriques
Salzano, Francisco Mauro
Hunemeier, Tábita
Bortolini, Maria Cátira
dc.subject.por.fl_str_mv Evolução humana
Genômica
Seleção natural
Homo sapiens
Neandertal
Denisova
topic Evolução humana
Genômica
Seleção natural
Homo sapiens
Neandertal
Denisova
human evolution
comparative genomics
positive selection
Neanderthal
Denisova
dc.subject.eng.fl_str_mv human evolution
comparative genomics
positive selection
Neanderthal
Denisova
description After a brief review of the most recent findings in the study of human evolution, an extensive comparison of the complete genomes of our nearest relative, the chimpanzee (Pan troglodytes), of extant Homo sapiens, archaic Homo neanderthalensis and the Denisova specimen were made. The focus was on non-synonymous mutations, which consequently had an impact on protein levels and these changes were classified according to degree of effect. A total of 10,447 non-synonymous substitutions were found in which the derived allele is fixed or nearly fixed in humans as compared to chimpanzee. Their most frequent location was on chromosome 21. Their presence was then searched in the two archaic genomes. Mutations in 381 genes would imply radical amino acid changes, with a fraction of these related to olfaction and other important physiological processes. Eight new alleles were identified in the Neanderthal and/or Denisova genetic pools. Four others, possibly affecting cognition, occured both in the sapiens and two other archaic genomes. The selective sweep that gave rise to Homo sapiens could, therefore, have initiated before the modern/archaic human divergence.
publishDate 2012
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dc.relation.ispartof.pt_BR.fl_str_mv Genetics and molecular biology. Ribeirão Preto, SP. Vol. 35, n. 4 supl (2012), p. 904-911
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