Unveiling fungal community structure along different levels of anthropic disturbance in a South American subtropical lagoon

Detalhes bibliográficos
Autor(a) principal: Pagani, Danielle Machado
Data de Publicação: 2023
Outros Autores: Reis, Stefânia Pereira Ventura dos, Vu, Duong, Pereira, Thairine Mendes, Tomé, Luiz Marcelo Ribeiro, Carvalho, Daniel Santana de, Rezende, Diogo Henrique Costa de, Kato, Rodrigo Bentes, García, Glen Jasper Yupanqui, Geml, József, Robert, Vicent, They, Ng Haig, Brenig, Bertram, Azevedo, Vasco Ariston de Carvalho, Scroferneker, Maria Lucia, Silva, Patrícia Valente da, Goes Neto, Aristóteles
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/267105
Resumo: Studies of fungal communities through amplicon metagenomics in aquatic environments, particularly in freshwater ecosystems, are still relatively recent. Unfortunately, many of these water bodies are facing growing threats from human expansion, such as effluent discharge from various human activities. As a result, these effluents have the potential to significantly alter the characteristics of water bodies and, subsequently, impact the diversity of their resident microorganisms. In this context, our objective was to investigate whether the fungal community structure varies according to the presence of different anthropic disturbances. We expect (i) the diversity of fungi will be greater and (ii) more specific unique operational taxonomic units (OTUs) related to each ecotonal system will be found compared to other sites of a lagoon. The study was conducted in the Tramandaí Lagoon (subtropical southern Brazil) at four distinct sampling points (estuary, middle of the lagoon, crop field area, and near a residential area where the Tramandaí River flows into the lagoon). As expected, the estuary and residential zones, which are ecotones, exhibited greater fungal diversity and more specific OTUs compared to the middle of the lagoon and crop field area. Moreover, a substantial proportion of fungal taxa could not be identified at the genus level, with many only classified at the phylum level, indicating potential new lineages. These findings underscore our limited understanding of the subtropical freshwater mycobiota.
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spelling Pagani, Danielle MachadoReis, Stefânia Pereira Ventura dosVu, DuongPereira, Thairine MendesTomé, Luiz Marcelo RibeiroCarvalho, Daniel Santana deRezende, Diogo Henrique Costa deKato, Rodrigo BentesGarcía, Glen Jasper YupanquiGeml, JózsefRobert, VicentThey, Ng HaigBrenig, BertramAzevedo, Vasco Ariston de CarvalhoScroferneker, Maria LuciaSilva, Patrícia Valente daGoes Neto, Aristóteles2023-11-14T03:24:55Z20232309-608Xhttp://hdl.handle.net/10183/267105001186245Studies of fungal communities through amplicon metagenomics in aquatic environments, particularly in freshwater ecosystems, are still relatively recent. Unfortunately, many of these water bodies are facing growing threats from human expansion, such as effluent discharge from various human activities. As a result, these effluents have the potential to significantly alter the characteristics of water bodies and, subsequently, impact the diversity of their resident microorganisms. In this context, our objective was to investigate whether the fungal community structure varies according to the presence of different anthropic disturbances. We expect (i) the diversity of fungi will be greater and (ii) more specific unique operational taxonomic units (OTUs) related to each ecotonal system will be found compared to other sites of a lagoon. The study was conducted in the Tramandaí Lagoon (subtropical southern Brazil) at four distinct sampling points (estuary, middle of the lagoon, crop field area, and near a residential area where the Tramandaí River flows into the lagoon). As expected, the estuary and residential zones, which are ecotones, exhibited greater fungal diversity and more specific OTUs compared to the middle of the lagoon and crop field area. Moreover, a substantial proportion of fungal taxa could not be identified at the genus level, with many only classified at the phylum level, indicating potential new lineages. These findings underscore our limited understanding of the subtropical freshwater mycobiota.application/pdfapplication/zipengJournal of fungi. Basel. Vol. 9, no. 9 (Sept. 2023), 890, 19 p.Fenômenos ecológicos e ambientaisÁgua doceLagoasFungosQualidade da águaTramandaí, Lagoa de (RS)FreshwaterFungiAmplicon metagenomicsUnveiling fungal community structure along different levels of anthropic disturbance in a South American subtropical lagoonEstrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSTEXT001186245.pdf.txt001186245.pdf.txtExtracted Texttext/plain75626http://www.lume.ufrgs.br/bitstream/10183/267105/3/001186245.pdf.txt375a520aebbad6939ba361c633402b12MD53ORIGINAL001186245.pdfTexto completo (inglês)application/pdf3558589http://www.lume.ufrgs.br/bitstream/10183/267105/1/001186245.pdff129050a5c8663bc5f81604497df59a2MD51001186245.zipMaterial suplementarapplication/zip1180659http://www.lume.ufrgs.br/bitstream/10183/267105/2/001186245.zipf632d05b299f7c0a3d3738ec24402594MD5210183/2671052023-12-08 04:22:16.718864oai:www.lume.ufrgs.br:10183/267105Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2023-12-08T06:22:16Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv Unveiling fungal community structure along different levels of anthropic disturbance in a South American subtropical lagoon
title Unveiling fungal community structure along different levels of anthropic disturbance in a South American subtropical lagoon
spellingShingle Unveiling fungal community structure along different levels of anthropic disturbance in a South American subtropical lagoon
Pagani, Danielle Machado
Fenômenos ecológicos e ambientais
Água doce
Lagoas
Fungos
Qualidade da água
Tramandaí, Lagoa de (RS)
Freshwater
Fungi
Amplicon metagenomics
title_short Unveiling fungal community structure along different levels of anthropic disturbance in a South American subtropical lagoon
title_full Unveiling fungal community structure along different levels of anthropic disturbance in a South American subtropical lagoon
title_fullStr Unveiling fungal community structure along different levels of anthropic disturbance in a South American subtropical lagoon
title_full_unstemmed Unveiling fungal community structure along different levels of anthropic disturbance in a South American subtropical lagoon
title_sort Unveiling fungal community structure along different levels of anthropic disturbance in a South American subtropical lagoon
author Pagani, Danielle Machado
author_facet Pagani, Danielle Machado
Reis, Stefânia Pereira Ventura dos
Vu, Duong
Pereira, Thairine Mendes
Tomé, Luiz Marcelo Ribeiro
Carvalho, Daniel Santana de
Rezende, Diogo Henrique Costa de
Kato, Rodrigo Bentes
García, Glen Jasper Yupanqui
Geml, József
Robert, Vicent
They, Ng Haig
Brenig, Bertram
Azevedo, Vasco Ariston de Carvalho
Scroferneker, Maria Lucia
Silva, Patrícia Valente da
Goes Neto, Aristóteles
author_role author
author2 Reis, Stefânia Pereira Ventura dos
Vu, Duong
Pereira, Thairine Mendes
Tomé, Luiz Marcelo Ribeiro
Carvalho, Daniel Santana de
Rezende, Diogo Henrique Costa de
Kato, Rodrigo Bentes
García, Glen Jasper Yupanqui
Geml, József
Robert, Vicent
They, Ng Haig
Brenig, Bertram
Azevedo, Vasco Ariston de Carvalho
Scroferneker, Maria Lucia
Silva, Patrícia Valente da
Goes Neto, Aristóteles
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Pagani, Danielle Machado
Reis, Stefânia Pereira Ventura dos
Vu, Duong
Pereira, Thairine Mendes
Tomé, Luiz Marcelo Ribeiro
Carvalho, Daniel Santana de
Rezende, Diogo Henrique Costa de
Kato, Rodrigo Bentes
García, Glen Jasper Yupanqui
Geml, József
Robert, Vicent
They, Ng Haig
Brenig, Bertram
Azevedo, Vasco Ariston de Carvalho
Scroferneker, Maria Lucia
Silva, Patrícia Valente da
Goes Neto, Aristóteles
dc.subject.por.fl_str_mv Fenômenos ecológicos e ambientais
Água doce
Lagoas
Fungos
Qualidade da água
Tramandaí, Lagoa de (RS)
topic Fenômenos ecológicos e ambientais
Água doce
Lagoas
Fungos
Qualidade da água
Tramandaí, Lagoa de (RS)
Freshwater
Fungi
Amplicon metagenomics
dc.subject.eng.fl_str_mv Freshwater
Fungi
Amplicon metagenomics
description Studies of fungal communities through amplicon metagenomics in aquatic environments, particularly in freshwater ecosystems, are still relatively recent. Unfortunately, many of these water bodies are facing growing threats from human expansion, such as effluent discharge from various human activities. As a result, these effluents have the potential to significantly alter the characteristics of water bodies and, subsequently, impact the diversity of their resident microorganisms. In this context, our objective was to investigate whether the fungal community structure varies according to the presence of different anthropic disturbances. We expect (i) the diversity of fungi will be greater and (ii) more specific unique operational taxonomic units (OTUs) related to each ecotonal system will be found compared to other sites of a lagoon. The study was conducted in the Tramandaí Lagoon (subtropical southern Brazil) at four distinct sampling points (estuary, middle of the lagoon, crop field area, and near a residential area where the Tramandaí River flows into the lagoon). As expected, the estuary and residential zones, which are ecotones, exhibited greater fungal diversity and more specific OTUs compared to the middle of the lagoon and crop field area. Moreover, a substantial proportion of fungal taxa could not be identified at the genus level, with many only classified at the phylum level, indicating potential new lineages. These findings underscore our limited understanding of the subtropical freshwater mycobiota.
publishDate 2023
dc.date.accessioned.fl_str_mv 2023-11-14T03:24:55Z
dc.date.issued.fl_str_mv 2023
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dc.language.iso.fl_str_mv eng
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dc.relation.ispartof.pt_BR.fl_str_mv Journal of fungi. Basel. Vol. 9, no. 9 (Sept. 2023), 890, 19 p.
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