Sequencing and promoter analysis of the nifENXorf3orf5fdxAnifQ operon from Azospirillum brasilense Sp7
Autor(a) principal: | |
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Data de Publicação: | 2001 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UFRGS |
Texto Completo: | http://hdl.handle.net/10183/21142 |
Resumo: | A 40-kb DNA region containing the major cluster of nif genes has been isolated from the Azospirillum brasilense Sp7 genome. In this region three nif operons have been identified: nifHDKorf1Y, nifENXorf3orf5fdxAnifQ and orf2nifUSVorf4. The operons containing nifENX and nifUSV genes are separated from the structural nifHDKorf1Y operon by about 5 kb and 10 kb, respectively. The present study shows the sequence analysis of the 6045-bp DNA region containing the nifENX genes. The deduced amino acid sequences from the open reading frames were compared to the nif gene products of other diazotrophic bacteria and indicate the presence of seven ORFs, all reading in the same direction as that of the nifHDKorf1Y operon. Consensus s54 and NifA-binding sites are present only in the promoter region upstream of the nifE gene. This promoter is activated by NifA protein and is approximately two-times less active than the nifH promoter, as indicated by the ß-galactosidase assays. This result suggests the differential expression of the nif genes and their respective products in Azospirillum. |
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Potrich, Deise PortoBressel, Tatiana Azevedo BastianSchrank, Irene SilveiraPassaglia, Luciane Maria Pereira2010-04-24T04:15:28Z20010100-879Xhttp://hdl.handle.net/10183/21142000328987A 40-kb DNA region containing the major cluster of nif genes has been isolated from the Azospirillum brasilense Sp7 genome. In this region three nif operons have been identified: nifHDKorf1Y, nifENXorf3orf5fdxAnifQ and orf2nifUSVorf4. The operons containing nifENX and nifUSV genes are separated from the structural nifHDKorf1Y operon by about 5 kb and 10 kb, respectively. The present study shows the sequence analysis of the 6045-bp DNA region containing the nifENX genes. The deduced amino acid sequences from the open reading frames were compared to the nif gene products of other diazotrophic bacteria and indicate the presence of seven ORFs, all reading in the same direction as that of the nifHDKorf1Y operon. Consensus s54 and NifA-binding sites are present only in the promoter region upstream of the nifE gene. This promoter is activated by NifA protein and is approximately two-times less active than the nifH promoter, as indicated by the ß-galactosidase assays. This result suggests the differential expression of the nif genes and their respective products in Azospirillum.application/pdfengBrazilian journal of medical and biological research = Revista brasileira de pesquisas médicas e biológicas. Ribeirão Preto, SP. Vol. 34, no. 11 (Nov. 2001), p. 1379-1395Azospirillum brasilenseAzospirillum brasilenseNif genesNifENX operonPromoter activitySequencing and promoter analysis of the nifENXorf3orf5fdxAnifQ operon from Azospirillum brasilense Sp7info:eu-repo/semantics/articleinfo:eu-repo/semantics/otherinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSORIGINAL000328987.pdf000328987.pdfTexto completo (inglês)application/pdf754394http://www.lume.ufrgs.br/bitstream/10183/21142/1/000328987.pdf806bb326951ac976ab9c521cc68366faMD51TEXT000328987.pdf.txt000328987.pdf.txtExtracted Texttext/plain35011http://www.lume.ufrgs.br/bitstream/10183/21142/2/000328987.pdf.txt76fe9ec253ad6315c81a7b1d9bc67fdeMD52THUMBNAIL000328987.pdf.jpg000328987.pdf.jpgGenerated Thumbnailimage/jpeg1660http://www.lume.ufrgs.br/bitstream/10183/21142/3/000328987.pdf.jpg4f1ceac0bcd76bc55a12924662859caaMD5310183/211422018-10-08 09:21:11.796oai:www.lume.ufrgs.br:10183/21142Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2018-10-08T12:21:11Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false |
dc.title.pt_BR.fl_str_mv |
Sequencing and promoter analysis of the nifENXorf3orf5fdxAnifQ operon from Azospirillum brasilense Sp7 |
title |
Sequencing and promoter analysis of the nifENXorf3orf5fdxAnifQ operon from Azospirillum brasilense Sp7 |
spellingShingle |
Sequencing and promoter analysis of the nifENXorf3orf5fdxAnifQ operon from Azospirillum brasilense Sp7 Potrich, Deise Porto Azospirillum brasilense Azospirillum brasilense Nif genes NifENX operon Promoter activity |
title_short |
Sequencing and promoter analysis of the nifENXorf3orf5fdxAnifQ operon from Azospirillum brasilense Sp7 |
title_full |
Sequencing and promoter analysis of the nifENXorf3orf5fdxAnifQ operon from Azospirillum brasilense Sp7 |
title_fullStr |
Sequencing and promoter analysis of the nifENXorf3orf5fdxAnifQ operon from Azospirillum brasilense Sp7 |
title_full_unstemmed |
Sequencing and promoter analysis of the nifENXorf3orf5fdxAnifQ operon from Azospirillum brasilense Sp7 |
title_sort |
Sequencing and promoter analysis of the nifENXorf3orf5fdxAnifQ operon from Azospirillum brasilense Sp7 |
author |
Potrich, Deise Porto |
author_facet |
Potrich, Deise Porto Bressel, Tatiana Azevedo Bastian Schrank, Irene Silveira Passaglia, Luciane Maria Pereira |
author_role |
author |
author2 |
Bressel, Tatiana Azevedo Bastian Schrank, Irene Silveira Passaglia, Luciane Maria Pereira |
author2_role |
author author author |
dc.contributor.author.fl_str_mv |
Potrich, Deise Porto Bressel, Tatiana Azevedo Bastian Schrank, Irene Silveira Passaglia, Luciane Maria Pereira |
dc.subject.por.fl_str_mv |
Azospirillum brasilense |
topic |
Azospirillum brasilense Azospirillum brasilense Nif genes NifENX operon Promoter activity |
dc.subject.eng.fl_str_mv |
Azospirillum brasilense Nif genes NifENX operon Promoter activity |
description |
A 40-kb DNA region containing the major cluster of nif genes has been isolated from the Azospirillum brasilense Sp7 genome. In this region three nif operons have been identified: nifHDKorf1Y, nifENXorf3orf5fdxAnifQ and orf2nifUSVorf4. The operons containing nifENX and nifUSV genes are separated from the structural nifHDKorf1Y operon by about 5 kb and 10 kb, respectively. The present study shows the sequence analysis of the 6045-bp DNA region containing the nifENX genes. The deduced amino acid sequences from the open reading frames were compared to the nif gene products of other diazotrophic bacteria and indicate the presence of seven ORFs, all reading in the same direction as that of the nifHDKorf1Y operon. Consensus s54 and NifA-binding sites are present only in the promoter region upstream of the nifE gene. This promoter is activated by NifA protein and is approximately two-times less active than the nifH promoter, as indicated by the ß-galactosidase assays. This result suggests the differential expression of the nif genes and their respective products in Azospirillum. |
publishDate |
2001 |
dc.date.issued.fl_str_mv |
2001 |
dc.date.accessioned.fl_str_mv |
2010-04-24T04:15:28Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/other |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
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publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10183/21142 |
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0100-879X |
dc.identifier.nrb.pt_BR.fl_str_mv |
000328987 |
identifier_str_mv |
0100-879X 000328987 |
url |
http://hdl.handle.net/10183/21142 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.ispartof.pt_BR.fl_str_mv |
Brazilian journal of medical and biological research = Revista brasileira de pesquisas médicas e biológicas. Ribeirão Preto, SP. Vol. 34, no. 11 (Nov. 2001), p. 1379-1395 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
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application/pdf |
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