Sequencing and promoter analysis of the nifENXorf3orf5fdxAnifQ operon from Azospirillum brasilense Sp7

Detalhes bibliográficos
Autor(a) principal: Potrich, Deise Porto
Data de Publicação: 2001
Outros Autores: Bressel, Tatiana Azevedo Bastian, Schrank, Irene Silveira, Passaglia, Luciane Maria Pereira
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/21142
Resumo: A 40-kb DNA region containing the major cluster of nif genes has been isolated from the Azospirillum brasilense Sp7 genome. In this region three nif operons have been identified: nifHDKorf1Y, nifENXorf3orf5fdxAnifQ and orf2nifUSVorf4. The operons containing nifENX and nifUSV genes are separated from the structural nifHDKorf1Y operon by about 5 kb and 10 kb, respectively. The present study shows the sequence analysis of the 6045-bp DNA region containing the nifENX genes. The deduced amino acid sequences from the open reading frames were compared to the nif gene products of other diazotrophic bacteria and indicate the presence of seven ORFs, all reading in the same direction as that of the nifHDKorf1Y operon. Consensus s54 and NifA-binding sites are present only in the promoter region upstream of the nifE gene. This promoter is activated by NifA protein and is approximately two-times less active than the nifH promoter, as indicated by the ß-galactosidase assays. This result suggests the differential expression of the nif genes and their respective products in Azospirillum.
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spelling Potrich, Deise PortoBressel, Tatiana Azevedo BastianSchrank, Irene SilveiraPassaglia, Luciane Maria Pereira2010-04-24T04:15:28Z20010100-879Xhttp://hdl.handle.net/10183/21142000328987A 40-kb DNA region containing the major cluster of nif genes has been isolated from the Azospirillum brasilense Sp7 genome. In this region three nif operons have been identified: nifHDKorf1Y, nifENXorf3orf5fdxAnifQ and orf2nifUSVorf4. The operons containing nifENX and nifUSV genes are separated from the structural nifHDKorf1Y operon by about 5 kb and 10 kb, respectively. The present study shows the sequence analysis of the 6045-bp DNA region containing the nifENX genes. The deduced amino acid sequences from the open reading frames were compared to the nif gene products of other diazotrophic bacteria and indicate the presence of seven ORFs, all reading in the same direction as that of the nifHDKorf1Y operon. Consensus s54 and NifA-binding sites are present only in the promoter region upstream of the nifE gene. This promoter is activated by NifA protein and is approximately two-times less active than the nifH promoter, as indicated by the ß-galactosidase assays. This result suggests the differential expression of the nif genes and their respective products in Azospirillum.application/pdfengBrazilian journal of medical and biological research = Revista brasileira de pesquisas médicas e biológicas. Ribeirão Preto, SP. Vol. 34, no. 11 (Nov. 2001), p. 1379-1395Azospirillum brasilenseAzospirillum brasilenseNif genesNifENX operonPromoter activitySequencing and promoter analysis of the nifENXorf3orf5fdxAnifQ operon from Azospirillum brasilense Sp7info:eu-repo/semantics/articleinfo:eu-repo/semantics/otherinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSORIGINAL000328987.pdf000328987.pdfTexto completo (inglês)application/pdf754394http://www.lume.ufrgs.br/bitstream/10183/21142/1/000328987.pdf806bb326951ac976ab9c521cc68366faMD51TEXT000328987.pdf.txt000328987.pdf.txtExtracted Texttext/plain35011http://www.lume.ufrgs.br/bitstream/10183/21142/2/000328987.pdf.txt76fe9ec253ad6315c81a7b1d9bc67fdeMD52THUMBNAIL000328987.pdf.jpg000328987.pdf.jpgGenerated Thumbnailimage/jpeg1660http://www.lume.ufrgs.br/bitstream/10183/21142/3/000328987.pdf.jpg4f1ceac0bcd76bc55a12924662859caaMD5310183/211422018-10-08 09:21:11.796oai:www.lume.ufrgs.br:10183/21142Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2018-10-08T12:21:11Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv Sequencing and promoter analysis of the nifENXorf3orf5fdxAnifQ operon from Azospirillum brasilense Sp7
title Sequencing and promoter analysis of the nifENXorf3orf5fdxAnifQ operon from Azospirillum brasilense Sp7
spellingShingle Sequencing and promoter analysis of the nifENXorf3orf5fdxAnifQ operon from Azospirillum brasilense Sp7
Potrich, Deise Porto
Azospirillum brasilense
Azospirillum brasilense
Nif genes
NifENX operon
Promoter activity
title_short Sequencing and promoter analysis of the nifENXorf3orf5fdxAnifQ operon from Azospirillum brasilense Sp7
title_full Sequencing and promoter analysis of the nifENXorf3orf5fdxAnifQ operon from Azospirillum brasilense Sp7
title_fullStr Sequencing and promoter analysis of the nifENXorf3orf5fdxAnifQ operon from Azospirillum brasilense Sp7
title_full_unstemmed Sequencing and promoter analysis of the nifENXorf3orf5fdxAnifQ operon from Azospirillum brasilense Sp7
title_sort Sequencing and promoter analysis of the nifENXorf3orf5fdxAnifQ operon from Azospirillum brasilense Sp7
author Potrich, Deise Porto
author_facet Potrich, Deise Porto
Bressel, Tatiana Azevedo Bastian
Schrank, Irene Silveira
Passaglia, Luciane Maria Pereira
author_role author
author2 Bressel, Tatiana Azevedo Bastian
Schrank, Irene Silveira
Passaglia, Luciane Maria Pereira
author2_role author
author
author
dc.contributor.author.fl_str_mv Potrich, Deise Porto
Bressel, Tatiana Azevedo Bastian
Schrank, Irene Silveira
Passaglia, Luciane Maria Pereira
dc.subject.por.fl_str_mv Azospirillum brasilense
topic Azospirillum brasilense
Azospirillum brasilense
Nif genes
NifENX operon
Promoter activity
dc.subject.eng.fl_str_mv Azospirillum brasilense
Nif genes
NifENX operon
Promoter activity
description A 40-kb DNA region containing the major cluster of nif genes has been isolated from the Azospirillum brasilense Sp7 genome. In this region three nif operons have been identified: nifHDKorf1Y, nifENXorf3orf5fdxAnifQ and orf2nifUSVorf4. The operons containing nifENX and nifUSV genes are separated from the structural nifHDKorf1Y operon by about 5 kb and 10 kb, respectively. The present study shows the sequence analysis of the 6045-bp DNA region containing the nifENX genes. The deduced amino acid sequences from the open reading frames were compared to the nif gene products of other diazotrophic bacteria and indicate the presence of seven ORFs, all reading in the same direction as that of the nifHDKorf1Y operon. Consensus s54 and NifA-binding sites are present only in the promoter region upstream of the nifE gene. This promoter is activated by NifA protein and is approximately two-times less active than the nifH promoter, as indicated by the ß-galactosidase assays. This result suggests the differential expression of the nif genes and their respective products in Azospirillum.
publishDate 2001
dc.date.issued.fl_str_mv 2001
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dc.relation.ispartof.pt_BR.fl_str_mv Brazilian journal of medical and biological research = Revista brasileira de pesquisas médicas e biológicas. Ribeirão Preto, SP. Vol. 34, no. 11 (Nov. 2001), p. 1379-1395
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