Cytogenomic evaluation of subjects with syndromic and nonsyndromic conotruncal heart defects
Autor(a) principal: | |
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Data de Publicação: | 2015 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UFRGS |
Texto Completo: | http://hdl.handle.net/10183/132026 |
Resumo: | Despite considerable advances in the detection of genomic abnormalities in congenital heart disease (CHD), the etiology of CHD remains largely unknown. CHD is the most common birth defect and is a major cause of infant morbidity and mortality, and conotruncal defects constitute 20% of all CHD cases. We used array comparative genomic hybridization (array-CGH) to retrospectively study 60 subjects with conotruncal defects and identify genomic imbalances. The DNA copy number variations (CNVs) detected were matched with data from genomic databases, and their clinical significance was evaluated. We found that 38.3% (23/60) of CHD cases possessed genomic imbalances. In 8.3% (5/60) of these cases, the imbalances were causal or potentially causal CNVs; in 8.3% (5/60), unclassified CNVs were identified; and in 21.6% (13/60), common variants were detected. Although the interpretation of the results must be refined and there is not yet a consensus regarding the types of CHD cases in which array- CGH should be used as a first-line test, the identification of these CNVs can assist in the evaluation and management of CHD.The results of such studies emphasize the growing importance of the use of genome-wide assays in subjects with CHD to increase the number of genomic data sets associated with this condition. |
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Souza, Karen Regina Silva deMergener, RafaellaHuber, JanainaPellanda, Lucia CamposRiegel, Mariluce2016-01-20T02:40:02Z20152314-6141http://hdl.handle.net/10183/132026000973518Despite considerable advances in the detection of genomic abnormalities in congenital heart disease (CHD), the etiology of CHD remains largely unknown. CHD is the most common birth defect and is a major cause of infant morbidity and mortality, and conotruncal defects constitute 20% of all CHD cases. We used array comparative genomic hybridization (array-CGH) to retrospectively study 60 subjects with conotruncal defects and identify genomic imbalances. The DNA copy number variations (CNVs) detected were matched with data from genomic databases, and their clinical significance was evaluated. We found that 38.3% (23/60) of CHD cases possessed genomic imbalances. In 8.3% (5/60) of these cases, the imbalances were causal or potentially causal CNVs; in 8.3% (5/60), unclassified CNVs were identified; and in 21.6% (13/60), common variants were detected. Although the interpretation of the results must be refined and there is not yet a consensus regarding the types of CHD cases in which array- CGH should be used as a first-line test, the identification of these CNVs can assist in the evaluation and management of CHD.The results of such studies emphasize the growing importance of the use of genome-wide assays in subjects with CHD to increase the number of genomic data sets associated with this condition.application/pdfengBioMed Research International. New York, NY. Vol. 2015 (2015), ID 401941, [12] p.Cardiopatias congênitasGenômicaCytogenomic evaluation of subjects with syndromic and nonsyndromic conotruncal heart defectsEstrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSORIGINAL000973518.pdf000973518.pdfTexto completo (inglês)application/pdf2534102http://www.lume.ufrgs.br/bitstream/10183/132026/1/000973518.pdfd1b8e7d029da0f1e43bc59b5c044a386MD51TEXT000973518.pdf.txt000973518.pdf.txtExtracted Texttext/plain58802http://www.lume.ufrgs.br/bitstream/10183/132026/2/000973518.pdf.txt55aabb5991f8a01f6096c520b79e53efMD52THUMBNAIL000973518.pdf.jpg000973518.pdf.jpgGenerated Thumbnailimage/jpeg1836http://www.lume.ufrgs.br/bitstream/10183/132026/3/000973518.pdf.jpg7e0c95dd068c5deb3bb7164d803c98bbMD5310183/1320262021-09-18 04:48:17.942514oai:www.lume.ufrgs.br:10183/132026Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2021-09-18T07:48:17Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false |
dc.title.pt_BR.fl_str_mv |
Cytogenomic evaluation of subjects with syndromic and nonsyndromic conotruncal heart defects |
title |
Cytogenomic evaluation of subjects with syndromic and nonsyndromic conotruncal heart defects |
spellingShingle |
Cytogenomic evaluation of subjects with syndromic and nonsyndromic conotruncal heart defects Souza, Karen Regina Silva de Cardiopatias congênitas Genômica |
title_short |
Cytogenomic evaluation of subjects with syndromic and nonsyndromic conotruncal heart defects |
title_full |
Cytogenomic evaluation of subjects with syndromic and nonsyndromic conotruncal heart defects |
title_fullStr |
Cytogenomic evaluation of subjects with syndromic and nonsyndromic conotruncal heart defects |
title_full_unstemmed |
Cytogenomic evaluation of subjects with syndromic and nonsyndromic conotruncal heart defects |
title_sort |
Cytogenomic evaluation of subjects with syndromic and nonsyndromic conotruncal heart defects |
author |
Souza, Karen Regina Silva de |
author_facet |
Souza, Karen Regina Silva de Mergener, Rafaella Huber, Janaina Pellanda, Lucia Campos Riegel, Mariluce |
author_role |
author |
author2 |
Mergener, Rafaella Huber, Janaina Pellanda, Lucia Campos Riegel, Mariluce |
author2_role |
author author author author |
dc.contributor.author.fl_str_mv |
Souza, Karen Regina Silva de Mergener, Rafaella Huber, Janaina Pellanda, Lucia Campos Riegel, Mariluce |
dc.subject.por.fl_str_mv |
Cardiopatias congênitas Genômica |
topic |
Cardiopatias congênitas Genômica |
description |
Despite considerable advances in the detection of genomic abnormalities in congenital heart disease (CHD), the etiology of CHD remains largely unknown. CHD is the most common birth defect and is a major cause of infant morbidity and mortality, and conotruncal defects constitute 20% of all CHD cases. We used array comparative genomic hybridization (array-CGH) to retrospectively study 60 subjects with conotruncal defects and identify genomic imbalances. The DNA copy number variations (CNVs) detected were matched with data from genomic databases, and their clinical significance was evaluated. We found that 38.3% (23/60) of CHD cases possessed genomic imbalances. In 8.3% (5/60) of these cases, the imbalances were causal or potentially causal CNVs; in 8.3% (5/60), unclassified CNVs were identified; and in 21.6% (13/60), common variants were detected. Although the interpretation of the results must be refined and there is not yet a consensus regarding the types of CHD cases in which array- CGH should be used as a first-line test, the identification of these CNVs can assist in the evaluation and management of CHD.The results of such studies emphasize the growing importance of the use of genome-wide assays in subjects with CHD to increase the number of genomic data sets associated with this condition. |
publishDate |
2015 |
dc.date.issued.fl_str_mv |
2015 |
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2016-01-20T02:40:02Z |
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2314-6141 |
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000973518 |
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BioMed Research International. New York, NY. Vol. 2015 (2015), ID 401941, [12] p. |
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