Cytogenomic evaluation of subjects with syndromic and nonsyndromic conotruncal heart defects

Detalhes bibliográficos
Autor(a) principal: Souza, Karen Regina Silva de
Data de Publicação: 2015
Outros Autores: Mergener, Rafaella, Huber, Janaina, Pellanda, Lucia Campos, Riegel, Mariluce
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/132026
Resumo: Despite considerable advances in the detection of genomic abnormalities in congenital heart disease (CHD), the etiology of CHD remains largely unknown. CHD is the most common birth defect and is a major cause of infant morbidity and mortality, and conotruncal defects constitute 20% of all CHD cases. We used array comparative genomic hybridization (array-CGH) to retrospectively study 60 subjects with conotruncal defects and identify genomic imbalances. The DNA copy number variations (CNVs) detected were matched with data from genomic databases, and their clinical significance was evaluated. We found that 38.3% (23/60) of CHD cases possessed genomic imbalances. In 8.3% (5/60) of these cases, the imbalances were causal or potentially causal CNVs; in 8.3% (5/60), unclassified CNVs were identified; and in 21.6% (13/60), common variants were detected. Although the interpretation of the results must be refined and there is not yet a consensus regarding the types of CHD cases in which array- CGH should be used as a first-line test, the identification of these CNVs can assist in the evaluation and management of CHD.The results of such studies emphasize the growing importance of the use of genome-wide assays in subjects with CHD to increase the number of genomic data sets associated with this condition.
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spelling Souza, Karen Regina Silva deMergener, RafaellaHuber, JanainaPellanda, Lucia CamposRiegel, Mariluce2016-01-20T02:40:02Z20152314-6141http://hdl.handle.net/10183/132026000973518Despite considerable advances in the detection of genomic abnormalities in congenital heart disease (CHD), the etiology of CHD remains largely unknown. CHD is the most common birth defect and is a major cause of infant morbidity and mortality, and conotruncal defects constitute 20% of all CHD cases. We used array comparative genomic hybridization (array-CGH) to retrospectively study 60 subjects with conotruncal defects and identify genomic imbalances. The DNA copy number variations (CNVs) detected were matched with data from genomic databases, and their clinical significance was evaluated. We found that 38.3% (23/60) of CHD cases possessed genomic imbalances. In 8.3% (5/60) of these cases, the imbalances were causal or potentially causal CNVs; in 8.3% (5/60), unclassified CNVs were identified; and in 21.6% (13/60), common variants were detected. Although the interpretation of the results must be refined and there is not yet a consensus regarding the types of CHD cases in which array- CGH should be used as a first-line test, the identification of these CNVs can assist in the evaluation and management of CHD.The results of such studies emphasize the growing importance of the use of genome-wide assays in subjects with CHD to increase the number of genomic data sets associated with this condition.application/pdfengBioMed Research International. New York, NY. Vol. 2015 (2015), ID 401941, [12] p.Cardiopatias congênitasGenômicaCytogenomic evaluation of subjects with syndromic and nonsyndromic conotruncal heart defectsEstrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSORIGINAL000973518.pdf000973518.pdfTexto completo (inglês)application/pdf2534102http://www.lume.ufrgs.br/bitstream/10183/132026/1/000973518.pdfd1b8e7d029da0f1e43bc59b5c044a386MD51TEXT000973518.pdf.txt000973518.pdf.txtExtracted Texttext/plain58802http://www.lume.ufrgs.br/bitstream/10183/132026/2/000973518.pdf.txt55aabb5991f8a01f6096c520b79e53efMD52THUMBNAIL000973518.pdf.jpg000973518.pdf.jpgGenerated Thumbnailimage/jpeg1836http://www.lume.ufrgs.br/bitstream/10183/132026/3/000973518.pdf.jpg7e0c95dd068c5deb3bb7164d803c98bbMD5310183/1320262021-09-18 04:48:17.942514oai:www.lume.ufrgs.br:10183/132026Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2021-09-18T07:48:17Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv Cytogenomic evaluation of subjects with syndromic and nonsyndromic conotruncal heart defects
title Cytogenomic evaluation of subjects with syndromic and nonsyndromic conotruncal heart defects
spellingShingle Cytogenomic evaluation of subjects with syndromic and nonsyndromic conotruncal heart defects
Souza, Karen Regina Silva de
Cardiopatias congênitas
Genômica
title_short Cytogenomic evaluation of subjects with syndromic and nonsyndromic conotruncal heart defects
title_full Cytogenomic evaluation of subjects with syndromic and nonsyndromic conotruncal heart defects
title_fullStr Cytogenomic evaluation of subjects with syndromic and nonsyndromic conotruncal heart defects
title_full_unstemmed Cytogenomic evaluation of subjects with syndromic and nonsyndromic conotruncal heart defects
title_sort Cytogenomic evaluation of subjects with syndromic and nonsyndromic conotruncal heart defects
author Souza, Karen Regina Silva de
author_facet Souza, Karen Regina Silva de
Mergener, Rafaella
Huber, Janaina
Pellanda, Lucia Campos
Riegel, Mariluce
author_role author
author2 Mergener, Rafaella
Huber, Janaina
Pellanda, Lucia Campos
Riegel, Mariluce
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Souza, Karen Regina Silva de
Mergener, Rafaella
Huber, Janaina
Pellanda, Lucia Campos
Riegel, Mariluce
dc.subject.por.fl_str_mv Cardiopatias congênitas
Genômica
topic Cardiopatias congênitas
Genômica
description Despite considerable advances in the detection of genomic abnormalities in congenital heart disease (CHD), the etiology of CHD remains largely unknown. CHD is the most common birth defect and is a major cause of infant morbidity and mortality, and conotruncal defects constitute 20% of all CHD cases. We used array comparative genomic hybridization (array-CGH) to retrospectively study 60 subjects with conotruncal defects and identify genomic imbalances. The DNA copy number variations (CNVs) detected were matched with data from genomic databases, and their clinical significance was evaluated. We found that 38.3% (23/60) of CHD cases possessed genomic imbalances. In 8.3% (5/60) of these cases, the imbalances were causal or potentially causal CNVs; in 8.3% (5/60), unclassified CNVs were identified; and in 21.6% (13/60), common variants were detected. Although the interpretation of the results must be refined and there is not yet a consensus regarding the types of CHD cases in which array- CGH should be used as a first-line test, the identification of these CNVs can assist in the evaluation and management of CHD.The results of such studies emphasize the growing importance of the use of genome-wide assays in subjects with CHD to increase the number of genomic data sets associated with this condition.
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dc.relation.ispartof.pt_BR.fl_str_mv BioMed Research International. New York, NY. Vol. 2015 (2015), ID 401941, [12] p.
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