Compositionality and overlapping in biomedical terminology: alternatives for health interoperability
Autor(a) principal: | |
---|---|
Data de Publicação: | 2020 |
Outros Autores: | |
Tipo de documento: | Artigo |
Idioma: | por |
Título da fonte: | Em Questão (Online) |
Texto Completo: | https://seer.ufrgs.br/index.php/EmQuestao/article/view/98128 |
Resumo: | A paramount information source within clinical practice is the patient record , an information-filled document that already exists in electronic format. The inherint inherent ambiguity of theThe ambiguity inherent in medical discourse has hampered the much sought-after automatic integration between electronic health records since, at this stage, automated systems are unable to address the syntactic and semantic complexity of the human language. Even standard terminologies designed to address such complexity are unable to solve the issues involved because of the multiplicity of alternatives, in addition to the fact that they are created for different purposes and goals. All this has resulted in redundancy, rework, and overlapping between terms. This paper assumes that the issue of interoperability is complex and needs to be tackled on several fronts. One of these fronts, in the context of electronic healthcare records, involves two conceptual conditions: epistemological overlapping and term compositionality. After explaining those conditions, we make use of an ontology-based model created on previous research to design and to test a method that aims to compensate for the shortcomings of such conditions. The test was performed on a fragment of the International Classification of Diseases. We found that the aforementioned conceptual conditions are relevant aspects to be faced in seeking interoperability. |
id |
UFRGS-8_2ce58be5ba9c2776ec8141d02f8e37da |
---|---|
oai_identifier_str |
oai:seer.ufrgs.br:article/98128 |
network_acronym_str |
UFRGS-8 |
network_name_str |
Em Questão (Online) |
repository_id_str |
|
spelling |
Compositionality and overlapping in biomedical terminology: alternatives for health interoperabilityComposicionalidade e sobreposição em terminologias biomédicas: alternativas para interoperabilidade em saúdeOntologiaRepresentação do conhecimentoTerminologias clínicasInteroperabilidade.OntologyKnowledge representationMedical terminologiesInteroperability.A paramount information source within clinical practice is the patient record , an information-filled document that already exists in electronic format. The inherint inherent ambiguity of theThe ambiguity inherent in medical discourse has hampered the much sought-after automatic integration between electronic health records since, at this stage, automated systems are unable to address the syntactic and semantic complexity of the human language. Even standard terminologies designed to address such complexity are unable to solve the issues involved because of the multiplicity of alternatives, in addition to the fact that they are created for different purposes and goals. All this has resulted in redundancy, rework, and overlapping between terms. This paper assumes that the issue of interoperability is complex and needs to be tackled on several fronts. One of these fronts, in the context of electronic healthcare records, involves two conceptual conditions: epistemological overlapping and term compositionality. After explaining those conditions, we make use of an ontology-based model created on previous research to design and to test a method that aims to compensate for the shortcomings of such conditions. The test was performed on a fragment of the International Classification of Diseases. We found that the aforementioned conceptual conditions are relevant aspects to be faced in seeking interoperability.Uma importante fonte de informação para a prática clínica é o prontuário de paciente, um documento que já existe no formato eletrônico. A ambiguidade inerente ao discurso médico tem dificultado a integração automática desejável entre prontuários eletrônicos de pacientes uma vez que, no atual estágio de desenvolvimento tecnológico, os sistemas automáticos não estão aptos a lidar com variações sintáticas e semânticas da linguagem humana. Mesmo as terminologias padronizadas, criadas para lidar com tais variações, não resolvem o problema à medida da multiplicidade de opções. Essas, além dos objetivos e propósitos diversos, têm resultado em redundância, retrabalho e sobreposição entre termos. O presente artigo parte da premissa de que o problema da interoperabilidade é complexo e precisa ser atacado em diversas frentes. Uma dessas frentes, no âmbito dos prontuários eletrônicos de pacientes, envolve situações de caráter conceitual, a saber, a sobreposição epistemológica e a composicionalidade de termos. Vale-se aqui de um modelo baseado em ontologias criado em pesquisa anterior para projetar e testar um método que objetiva atenuar os efeitos dessas situações. O teste é realizado em fragmento da Classificação Internacional de Doenças e conclui-se que as situações de natureza conceitual mencionadas são aspectos relevantes a combater na busca por interoperabilidade.Universidade Federal do Rio Grande do Sul, Faculdade de Biblioteconomia e Comunicação, Programa de Pós-Graduação em Ciência da Informação (Porto Alegre/RS)2020-09-16info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionAvaliado por Paresapplication/pdfhttps://seer.ufrgs.br/index.php/EmQuestao/article/view/9812810.19132/1808-5245263.196-223Em Questão; v. 26, n. 3, set./dez. 2020; 196-223Em Questão; v. 26, n. 3, set./dez. 2020; 196-223Em Questão; v. 26, n. 3, set./dez. 2020; 196-2231808-52451807-8893reponame:Em Questão (Online)instname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSporhttps://seer.ufrgs.br/index.php/EmQuestao/article/view/98128/56927Copyright (c) 2020 Livia Marangon Duffles Teixeira, Mauricio Barcellos Almeidahttps://creativecommons.org/licenses/by/4.0info:eu-repo/semantics/openAccessTeixeira, Livia Marangon DufflesAlmeida, Mauricio Barcellos2024-03-19T13:23:46Zoai:seer.ufrgs.br:article/98128Revistahttps://seer.ufrgs.br/emquestao/PUBhttps://seer.ufrgs.br/EmQuestao/oaiemquestao@ufrgs.br||emquestao@ufrgs.br1808-52451807-8893opendoar:2024-03-19T13:23:46Em Questão (Online) - Universidade Federal do Rio Grande do Sul (UFRGS)false |
dc.title.none.fl_str_mv |
Compositionality and overlapping in biomedical terminology: alternatives for health interoperability Composicionalidade e sobreposição em terminologias biomédicas: alternativas para interoperabilidade em saúde |
title |
Compositionality and overlapping in biomedical terminology: alternatives for health interoperability |
spellingShingle |
Compositionality and overlapping in biomedical terminology: alternatives for health interoperability Teixeira, Livia Marangon Duffles Ontologia Representação do conhecimento Terminologias clínicas Interoperabilidade. Ontology Knowledge representation Medical terminologies Interoperability. |
title_short |
Compositionality and overlapping in biomedical terminology: alternatives for health interoperability |
title_full |
Compositionality and overlapping in biomedical terminology: alternatives for health interoperability |
title_fullStr |
Compositionality and overlapping in biomedical terminology: alternatives for health interoperability |
title_full_unstemmed |
Compositionality and overlapping in biomedical terminology: alternatives for health interoperability |
title_sort |
Compositionality and overlapping in biomedical terminology: alternatives for health interoperability |
author |
Teixeira, Livia Marangon Duffles |
author_facet |
Teixeira, Livia Marangon Duffles Almeida, Mauricio Barcellos |
author_role |
author |
author2 |
Almeida, Mauricio Barcellos |
author2_role |
author |
dc.contributor.author.fl_str_mv |
Teixeira, Livia Marangon Duffles Almeida, Mauricio Barcellos |
dc.subject.por.fl_str_mv |
Ontologia Representação do conhecimento Terminologias clínicas Interoperabilidade. Ontology Knowledge representation Medical terminologies Interoperability. |
topic |
Ontologia Representação do conhecimento Terminologias clínicas Interoperabilidade. Ontology Knowledge representation Medical terminologies Interoperability. |
description |
A paramount information source within clinical practice is the patient record , an information-filled document that already exists in electronic format. The inherint inherent ambiguity of theThe ambiguity inherent in medical discourse has hampered the much sought-after automatic integration between electronic health records since, at this stage, automated systems are unable to address the syntactic and semantic complexity of the human language. Even standard terminologies designed to address such complexity are unable to solve the issues involved because of the multiplicity of alternatives, in addition to the fact that they are created for different purposes and goals. All this has resulted in redundancy, rework, and overlapping between terms. This paper assumes that the issue of interoperability is complex and needs to be tackled on several fronts. One of these fronts, in the context of electronic healthcare records, involves two conceptual conditions: epistemological overlapping and term compositionality. After explaining those conditions, we make use of an ontology-based model created on previous research to design and to test a method that aims to compensate for the shortcomings of such conditions. The test was performed on a fragment of the International Classification of Diseases. We found that the aforementioned conceptual conditions are relevant aspects to be faced in seeking interoperability. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-09-16 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion Avaliado por Pares |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://seer.ufrgs.br/index.php/EmQuestao/article/view/98128 10.19132/1808-5245263.196-223 |
url |
https://seer.ufrgs.br/index.php/EmQuestao/article/view/98128 |
identifier_str_mv |
10.19132/1808-5245263.196-223 |
dc.language.iso.fl_str_mv |
por |
language |
por |
dc.relation.none.fl_str_mv |
https://seer.ufrgs.br/index.php/EmQuestao/article/view/98128/56927 |
dc.rights.driver.fl_str_mv |
Copyright (c) 2020 Livia Marangon Duffles Teixeira, Mauricio Barcellos Almeida https://creativecommons.org/licenses/by/4.0 info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
Copyright (c) 2020 Livia Marangon Duffles Teixeira, Mauricio Barcellos Almeida https://creativecommons.org/licenses/by/4.0 |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Universidade Federal do Rio Grande do Sul, Faculdade de Biblioteconomia e Comunicação, Programa de Pós-Graduação em Ciência da Informação (Porto Alegre/RS) |
publisher.none.fl_str_mv |
Universidade Federal do Rio Grande do Sul, Faculdade de Biblioteconomia e Comunicação, Programa de Pós-Graduação em Ciência da Informação (Porto Alegre/RS) |
dc.source.none.fl_str_mv |
Em Questão; v. 26, n. 3, set./dez. 2020; 196-223 Em Questão; v. 26, n. 3, set./dez. 2020; 196-223 Em Questão; v. 26, n. 3, set./dez. 2020; 196-223 1808-5245 1807-8893 reponame:Em Questão (Online) instname:Universidade Federal do Rio Grande do Sul (UFRGS) instacron:UFRGS |
instname_str |
Universidade Federal do Rio Grande do Sul (UFRGS) |
instacron_str |
UFRGS |
institution |
UFRGS |
reponame_str |
Em Questão (Online) |
collection |
Em Questão (Online) |
repository.name.fl_str_mv |
Em Questão (Online) - Universidade Federal do Rio Grande do Sul (UFRGS) |
repository.mail.fl_str_mv |
emquestao@ufrgs.br||emquestao@ufrgs.br |
_version_ |
1799766161596874752 |