D2BIA—flexible, not (explicitly) arbitrary and reference/structurally invariant—a very effective and improved version of the D3BIA aromaticity index

Detalhes bibliográficos
Autor(a) principal: Firme, Caio Lima
Data de Publicação: 2017
Outros Autores: Araújo, Diógenes Mendes
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRN
Texto Completo: https://repositorio.ufrn.br/jspui/handle/123456789/29431
Resumo: Although there are a multitude of aromaticity indexes, only a few have a widespread usage. All famous aro- maticity indexes are limited: HOMA and FLU are reference dependent; ELF is π-bond-dependent; PDI is structurally dependent and NICS is ring size dependent. These limitations stimulate the continuous search for better (i.e., having no dependency), more flexible (i.e., applied to any aromatic system) and more effective (i.e., with excellent correlations with other indexes) aromaticity indexes. The D3BIA was our first topological aromaticity index. It is flexible, reference-independent and effective for planar and caged aromatic molecules. However, one of its terms, the degree of degeneracy (δ), is arbitrary and difficult to carry out for new users hus, in this work, we show that D2BIA—an improved version of D3BIA—is a good candidate to be used widely, since it retains the strong points of D3BIA while avoiding its weak point. In particular cases where all studied systems have δ = 1 (e.g., for acenes), then D2BIA equals D3BIA. For our recent study with acenes, D3BIA (and, as a consequence, D2BIA) has (have) an excellent correlation with FLU according to the MP3 method. In this work, by using DFT calculations for a series involving several six-membered and five membered heteroaromatic rings, only D2BIA and NICS have very good correlation. All other well known aromaticity indexes used in this work (FLU, HOMA and ELF) gave poor correlations. As to homoaromatic systems, only D2BIA vs NICS and D2BIA vs FLU plots have excellent correlations. HOMA has the worst results in this series. Thus, D2BIA proved to be flexible and effective for the analysis of heteroaromatic rings of different sizes and for caged homoaromatic systems. Moreover, D2BIA has better correlations than D3BIA for planar aromatic systems, and same correlations for caged-homoaromatic systems
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spelling Firme, Caio LimaAraújo, Diógenes Mendes2020-07-03T15:00:46Z2020-07-03T15:00:46Z2017-08-07FIRME, Caio Lima; ARAÚJO, Diógenes Mendes. D2BIA—flexible, not (explicitly) arbitrary and reference/structurally invariant—a very effective and improved version of the D3BIA aromaticity index. Journal of Molecular Modeling, [S.l.], v.23, n. 9, p. 1-9, ago. 2017. Disponível em: https://link.springer.com/article/10.1007/s00894-017-3433-6. Acesso em: 18 jun. 2020.0948-5023https://repositorio.ufrn.br/jspui/handle/123456789/2943110.1007/s00894-017-3433-6SpringerAttribution 3.0 Brazilhttp://creativecommons.org/licenses/by/3.0/br/info:eu-repo/semantics/openAccessD3BIAD2BIAAromaticity indexQTAIMHeteroaromatic ringsHomoaromaticityNICSD2BIA—flexible, not (explicitly) arbitrary and reference/structurally invariant—a very effective and improved version of the D3BIA aromaticity indexinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleAlthough there are a multitude of aromaticity indexes, only a few have a widespread usage. All famous aro- maticity indexes are limited: HOMA and FLU are reference dependent; ELF is π-bond-dependent; PDI is structurally dependent and NICS is ring size dependent. These limitations stimulate the continuous search for better (i.e., having no dependency), more flexible (i.e., applied to any aromatic system) and more effective (i.e., with excellent correlations with other indexes) aromaticity indexes. The D3BIA was our first topological aromaticity index. It is flexible, reference-independent and effective for planar and caged aromatic molecules. However, one of its terms, the degree of degeneracy (δ), is arbitrary and difficult to carry out for new users hus, in this work, we show that D2BIA—an improved version of D3BIA—is a good candidate to be used widely, since it retains the strong points of D3BIA while avoiding its weak point. In particular cases where all studied systems have δ = 1 (e.g., for acenes), then D2BIA equals D3BIA. For our recent study with acenes, D3BIA (and, as a consequence, D2BIA) has (have) an excellent correlation with FLU according to the MP3 method. In this work, by using DFT calculations for a series involving several six-membered and five membered heteroaromatic rings, only D2BIA and NICS have very good correlation. All other well known aromaticity indexes used in this work (FLU, HOMA and ELF) gave poor correlations. As to homoaromatic systems, only D2BIA vs NICS and D2BIA vs FLU plots have excellent correlations. HOMA has the worst results in this series. Thus, D2BIA proved to be flexible and effective for the analysis of heteroaromatic rings of different sizes and for caged homoaromatic systems. 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dc.title.pt_BR.fl_str_mv D2BIA—flexible, not (explicitly) arbitrary and reference/structurally invariant—a very effective and improved version of the D3BIA aromaticity index
title D2BIA—flexible, not (explicitly) arbitrary and reference/structurally invariant—a very effective and improved version of the D3BIA aromaticity index
spellingShingle D2BIA—flexible, not (explicitly) arbitrary and reference/structurally invariant—a very effective and improved version of the D3BIA aromaticity index
Firme, Caio Lima
D3BIA
D2BIA
Aromaticity index
QTAIM
Heteroaromatic rings
Homoaromaticity
NICS
title_short D2BIA—flexible, not (explicitly) arbitrary and reference/structurally invariant—a very effective and improved version of the D3BIA aromaticity index
title_full D2BIA—flexible, not (explicitly) arbitrary and reference/structurally invariant—a very effective and improved version of the D3BIA aromaticity index
title_fullStr D2BIA—flexible, not (explicitly) arbitrary and reference/structurally invariant—a very effective and improved version of the D3BIA aromaticity index
title_full_unstemmed D2BIA—flexible, not (explicitly) arbitrary and reference/structurally invariant—a very effective and improved version of the D3BIA aromaticity index
title_sort D2BIA—flexible, not (explicitly) arbitrary and reference/structurally invariant—a very effective and improved version of the D3BIA aromaticity index
author Firme, Caio Lima
author_facet Firme, Caio Lima
Araújo, Diógenes Mendes
author_role author
author2 Araújo, Diógenes Mendes
author2_role author
dc.contributor.author.fl_str_mv Firme, Caio Lima
Araújo, Diógenes Mendes
dc.subject.por.fl_str_mv D3BIA
D2BIA
Aromaticity index
QTAIM
Heteroaromatic rings
Homoaromaticity
NICS
topic D3BIA
D2BIA
Aromaticity index
QTAIM
Heteroaromatic rings
Homoaromaticity
NICS
description Although there are a multitude of aromaticity indexes, only a few have a widespread usage. All famous aro- maticity indexes are limited: HOMA and FLU are reference dependent; ELF is π-bond-dependent; PDI is structurally dependent and NICS is ring size dependent. These limitations stimulate the continuous search for better (i.e., having no dependency), more flexible (i.e., applied to any aromatic system) and more effective (i.e., with excellent correlations with other indexes) aromaticity indexes. The D3BIA was our first topological aromaticity index. It is flexible, reference-independent and effective for planar and caged aromatic molecules. However, one of its terms, the degree of degeneracy (δ), is arbitrary and difficult to carry out for new users hus, in this work, we show that D2BIA—an improved version of D3BIA—is a good candidate to be used widely, since it retains the strong points of D3BIA while avoiding its weak point. In particular cases where all studied systems have δ = 1 (e.g., for acenes), then D2BIA equals D3BIA. For our recent study with acenes, D3BIA (and, as a consequence, D2BIA) has (have) an excellent correlation with FLU according to the MP3 method. In this work, by using DFT calculations for a series involving several six-membered and five membered heteroaromatic rings, only D2BIA and NICS have very good correlation. All other well known aromaticity indexes used in this work (FLU, HOMA and ELF) gave poor correlations. As to homoaromatic systems, only D2BIA vs NICS and D2BIA vs FLU plots have excellent correlations. HOMA has the worst results in this series. Thus, D2BIA proved to be flexible and effective for the analysis of heteroaromatic rings of different sizes and for caged homoaromatic systems. Moreover, D2BIA has better correlations than D3BIA for planar aromatic systems, and same correlations for caged-homoaromatic systems
publishDate 2017
dc.date.issued.fl_str_mv 2017-08-07
dc.date.accessioned.fl_str_mv 2020-07-03T15:00:46Z
dc.date.available.fl_str_mv 2020-07-03T15:00:46Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.citation.fl_str_mv FIRME, Caio Lima; ARAÚJO, Diógenes Mendes. D2BIA—flexible, not (explicitly) arbitrary and reference/structurally invariant—a very effective and improved version of the D3BIA aromaticity index. Journal of Molecular Modeling, [S.l.], v.23, n. 9, p. 1-9, ago. 2017. Disponível em: https://link.springer.com/article/10.1007/s00894-017-3433-6. Acesso em: 18 jun. 2020.
dc.identifier.uri.fl_str_mv https://repositorio.ufrn.br/jspui/handle/123456789/29431
dc.identifier.issn.none.fl_str_mv 0948-5023
dc.identifier.doi.none.fl_str_mv 10.1007/s00894-017-3433-6
identifier_str_mv FIRME, Caio Lima; ARAÚJO, Diógenes Mendes. D2BIA—flexible, not (explicitly) arbitrary and reference/structurally invariant—a very effective and improved version of the D3BIA aromaticity index. Journal of Molecular Modeling, [S.l.], v.23, n. 9, p. 1-9, ago. 2017. Disponível em: https://link.springer.com/article/10.1007/s00894-017-3433-6. Acesso em: 18 jun. 2020.
0948-5023
10.1007/s00894-017-3433-6
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