Mutation detection in tumor-derived cell free DNA anticipates progression in a patient with metastatic colorectal cancer

Detalhes bibliográficos
Autor(a) principal: Barros, Bruna D. de Figueiredo
Data de Publicação: 2018
Outros Autores: Kupper, Bruna E. C., Aguiar Junior, Samuel, Mello, Celso A. L. de, Begnam, Maria D., Chojniak, Rubens, Souza, Sandro José de, Torrezan, Giovana T., Carraro, Dirce M.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRN
Texto Completo: https://repositorio.ufrn.br/jspui/handle/123456789/25924
Resumo: Background: The observation of tumor-derived cell-free DNA (ctDNA) in plasma brought new expectations to monitor treatment response in cancer patients. Case presentation: In an exploratory case of a 57-year-old man diagnosed with metastatic sigmoid adenocarcinoma, we used a hotspot panel of cancer-associated gene mutations to identify tumor-specific mutations in the primary tumor and metastasis. Results: Five mutations were detected (KRAS, p.Gly12Val; TP53, p.Arg175His; RB1, p.Ile680Thr; ALK, p.Gly1184Glu; and ERBB2, p.Lys860Lys), of which three were detected in both tissue types (primary tumor and metastasis). All five mutations were monitored in the ctDNA of six serial plasma samples. Only KRAS and TP53 mutations were detected at a high frequency in the first plasma sample. After 1 month of chemotherapy the allele frequencies of both mutations fell below the detection limit. From the third month of systemic treatment onward, the allele frequencies of both mutations were detectable in plasma, displaying a continual increase thereafter. The remaining three mutations were not detected in plasma samples. Signs of disease progression in ctDNA during the treatment period were evident while computed tomography (CT) measurements suggested stable metastatic lesions throughout the treatment. Conclusions: Liquid biopsies revealed tumor heterogeneity and predicted tumor progression, demonstrating the potential of ctDNA analysis to be a sensitive and specific tool for monitoring treatment responsivity and for early identification of treatment resistance.
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spelling Barros, Bruna D. de FigueiredoKupper, Bruna E. C.Aguiar Junior, SamuelMello, Celso A. L. deBegnam, Maria D.Chojniak, RubensSouza, Sandro José deTorrezan, Giovana T.Carraro, Dirce M.2018-10-02T14:29:55Z2018-10-02T14:29:55Z2018-08-10BARROS, B. D. F. et al. Mutation detection in tumor-derived cell free DNA anticipates progression in a patient with metastatic colorectal cancer. Front. Oncol., v. 8, p. 306, ago/2018.https://repositorio.ufrn.br/jspui/handle/123456789/2592410.3389/fonc.2018.00306engliquid biopsyctDNAcolorectal cancerNGSgene panelMutation detection in tumor-derived cell free DNA anticipates progression in a patient with metastatic colorectal cancerinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleBackground: The observation of tumor-derived cell-free DNA (ctDNA) in plasma brought new expectations to monitor treatment response in cancer patients. Case presentation: In an exploratory case of a 57-year-old man diagnosed with metastatic sigmoid adenocarcinoma, we used a hotspot panel of cancer-associated gene mutations to identify tumor-specific mutations in the primary tumor and metastasis. Results: Five mutations were detected (KRAS, p.Gly12Val; TP53, p.Arg175His; RB1, p.Ile680Thr; ALK, p.Gly1184Glu; and ERBB2, p.Lys860Lys), of which three were detected in both tissue types (primary tumor and metastasis). All five mutations were monitored in the ctDNA of six serial plasma samples. Only KRAS and TP53 mutations were detected at a high frequency in the first plasma sample. After 1 month of chemotherapy the allele frequencies of both mutations fell below the detection limit. From the third month of systemic treatment onward, the allele frequencies of both mutations were detectable in plasma, displaying a continual increase thereafter. The remaining three mutations were not detected in plasma samples. Signs of disease progression in ctDNA during the treatment period were evident while computed tomography (CT) measurements suggested stable metastatic lesions throughout the treatment. Conclusions: Liquid biopsies revealed tumor heterogeneity and predicted tumor progression, demonstrating the potential of ctDNA analysis to be a sensitive and specific tool for monitoring treatment responsivity and for early identification of treatment resistance.info:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRNinstname:Universidade Federal do Rio Grande do Norte (UFRN)instacron:UFRNORIGINALSandroSouza_ICe_2018_Mutation detection.pdfSandroSouza_ICe_2018_Mutation detection.pdfSandroSouza_ICe_2018_Mutation detectionapplication/pdf573402https://repositorio.ufrn.br/bitstream/123456789/25924/1/SandroSouza_ICe_2018_Mutation%20detection.pdf5f76b7315909fd419c3da51e43a42185MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://repositorio.ufrn.br/bitstream/123456789/25924/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52TEXTSandroSouza_ICe_2018_Mutation detection.pdf.txtSandroSouza_ICe_2018_Mutation detection.pdf.txtExtracted texttext/plain29946https://repositorio.ufrn.br/bitstream/123456789/25924/3/SandroSouza_ICe_2018_Mutation%20detection.pdf.txtdf03add9f1cd0d451588af6b963bb2b7MD53THUMBNAILSandroSouza_ICe_2018_Mutation detection.pdf.jpgSandroSouza_ICe_2018_Mutation detection.pdf.jpgIM Thumbnailimage/jpeg10683https://repositorio.ufrn.br/bitstream/123456789/25924/4/SandroSouza_ICe_2018_Mutation%20detection.pdf.jpgcd3baff7a2c5025664b47d6c38bb558dMD54123456789/259242021-07-09 19:45:07.666oai:https://repositorio.ufrn.br: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Repositório de PublicaçõesPUBhttp://repositorio.ufrn.br/oai/opendoar:2021-07-09T22:45:07Repositório Institucional da UFRN - Universidade Federal do Rio Grande do Norte (UFRN)false
dc.title.pt_BR.fl_str_mv Mutation detection in tumor-derived cell free DNA anticipates progression in a patient with metastatic colorectal cancer
title Mutation detection in tumor-derived cell free DNA anticipates progression in a patient with metastatic colorectal cancer
spellingShingle Mutation detection in tumor-derived cell free DNA anticipates progression in a patient with metastatic colorectal cancer
Barros, Bruna D. de Figueiredo
liquid biopsy
ctDNA
colorectal cancer
NGS
gene panel
title_short Mutation detection in tumor-derived cell free DNA anticipates progression in a patient with metastatic colorectal cancer
title_full Mutation detection in tumor-derived cell free DNA anticipates progression in a patient with metastatic colorectal cancer
title_fullStr Mutation detection in tumor-derived cell free DNA anticipates progression in a patient with metastatic colorectal cancer
title_full_unstemmed Mutation detection in tumor-derived cell free DNA anticipates progression in a patient with metastatic colorectal cancer
title_sort Mutation detection in tumor-derived cell free DNA anticipates progression in a patient with metastatic colorectal cancer
author Barros, Bruna D. de Figueiredo
author_facet Barros, Bruna D. de Figueiredo
Kupper, Bruna E. C.
Aguiar Junior, Samuel
Mello, Celso A. L. de
Begnam, Maria D.
Chojniak, Rubens
Souza, Sandro José de
Torrezan, Giovana T.
Carraro, Dirce M.
author_role author
author2 Kupper, Bruna E. C.
Aguiar Junior, Samuel
Mello, Celso A. L. de
Begnam, Maria D.
Chojniak, Rubens
Souza, Sandro José de
Torrezan, Giovana T.
Carraro, Dirce M.
author2_role author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Barros, Bruna D. de Figueiredo
Kupper, Bruna E. C.
Aguiar Junior, Samuel
Mello, Celso A. L. de
Begnam, Maria D.
Chojniak, Rubens
Souza, Sandro José de
Torrezan, Giovana T.
Carraro, Dirce M.
dc.subject.por.fl_str_mv liquid biopsy
ctDNA
colorectal cancer
NGS
gene panel
topic liquid biopsy
ctDNA
colorectal cancer
NGS
gene panel
description Background: The observation of tumor-derived cell-free DNA (ctDNA) in plasma brought new expectations to monitor treatment response in cancer patients. Case presentation: In an exploratory case of a 57-year-old man diagnosed with metastatic sigmoid adenocarcinoma, we used a hotspot panel of cancer-associated gene mutations to identify tumor-specific mutations in the primary tumor and metastasis. Results: Five mutations were detected (KRAS, p.Gly12Val; TP53, p.Arg175His; RB1, p.Ile680Thr; ALK, p.Gly1184Glu; and ERBB2, p.Lys860Lys), of which three were detected in both tissue types (primary tumor and metastasis). All five mutations were monitored in the ctDNA of six serial plasma samples. Only KRAS and TP53 mutations were detected at a high frequency in the first plasma sample. After 1 month of chemotherapy the allele frequencies of both mutations fell below the detection limit. From the third month of systemic treatment onward, the allele frequencies of both mutations were detectable in plasma, displaying a continual increase thereafter. The remaining three mutations were not detected in plasma samples. Signs of disease progression in ctDNA during the treatment period were evident while computed tomography (CT) measurements suggested stable metastatic lesions throughout the treatment. Conclusions: Liquid biopsies revealed tumor heterogeneity and predicted tumor progression, demonstrating the potential of ctDNA analysis to be a sensitive and specific tool for monitoring treatment responsivity and for early identification of treatment resistance.
publishDate 2018
dc.date.accessioned.fl_str_mv 2018-10-02T14:29:55Z
dc.date.available.fl_str_mv 2018-10-02T14:29:55Z
dc.date.issued.fl_str_mv 2018-08-10
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.citation.fl_str_mv BARROS, B. D. F. et al. Mutation detection in tumor-derived cell free DNA anticipates progression in a patient with metastatic colorectal cancer. Front. Oncol., v. 8, p. 306, ago/2018.
dc.identifier.uri.fl_str_mv https://repositorio.ufrn.br/jspui/handle/123456789/25924
dc.identifier.doi.none.fl_str_mv 10.3389/fonc.2018.00306
identifier_str_mv BARROS, B. D. F. et al. Mutation detection in tumor-derived cell free DNA anticipates progression in a patient with metastatic colorectal cancer. Front. Oncol., v. 8, p. 306, ago/2018.
10.3389/fonc.2018.00306
url https://repositorio.ufrn.br/jspui/handle/123456789/25924
dc.language.iso.fl_str_mv eng
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dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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