caracterização in situ e estrutura genética de populações de Gossypium mustelinum

Detalhes bibliográficos
Autor(a) principal: Alves, Milena Ferreira
Data de Publicação: 2009
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Repositório Institucional da UFRN
Texto Completo: https://repositorio.ufrn.br/jspui/handle/123456789/16769
Resumo: Gossypium mustelinum Miers ex Watt is the only cotton species native from Brazil. It is endemic of the semi-arid region from North-east of the country, where it occur near from resilient water sources. The threats to the in situ conservation of the populations are caused by human interference in its habitat, mainly by excessive cattle graze and deforestation. Establish efficient strategies of in situ conservation depend on the accomplishment of a diagnosis of how the specie is found in its natural environment, and the knowledge about the genetic structure of the populations. The objectives of this work were i) to determine the in situ conditions of two populations present in rivers from basin of Rio Paraguaçu at the Bahia State, ii) to evaluate the structure and genetic variability presented in both populations, iii) to establish in situ and ex situ conservation strategies. It were realized collection in november 2007, when was realized in situ characterization of G. mustelinum. SSR markers were used for analyze 218 genotypes deriving from two populations of the G. mustelinum, localized at Tocó river and the Capivara river. The allelic frequencies, the heterozigosity and the F statics were estimated. All the plants were classified as wild and natives, and there was no evidence of the use the plants or its parts. The populations showed different conservation conditions in situ. Few plantlets were found in sites with excessive cattle feed, an indication that the damages in young plants should be high enough to compromise the renovation of the populations. On the other hand, populations were well preserved when the anthropic damages was low or inexistent. The 14 SSR primer pairs amplified 17 loci with a medium number of 5 alleles per locus (a total of 85 alleles). The high level of endogamy estimated (FIS=0,808) and the low observed heterozygosity (H0=0,093) were indicatives that the populations reproduce mainly by selfing, geitonogamy and crosses between related individuals. The genetic diversity was high (HE=0,482) and the differentiation between the populations was very high (FST=0,328). At least two sites from both populations of G. mustelinum must be preserved to achieve suitable in situ conservation. Actions that preserve the gallery forest and keep the cattle away should implemented, and could be as simple as erecting a fence. It is not possible anticipated if the in situ preservation will be possible. Therefore collections and ex situ preservation of representative specimens are essential to conserve the genetic diversity of native G. mustelinum
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spelling Alves, Milena Ferreirahttp://lattes.cnpq.br/9738264326712552http://lattes.cnpq.br/2493954146850909Hoffmann, Lúcia Vieirahttp://lattes.cnpq.br/1552220402943995Freire, Eleusio Curvelohttp://lattes.cnpq.br/2400072395820099Nóbrega, Márcia Barreto de MedeirosBarroso, Paulo Augusto Vianna2014-12-17T15:18:11Z2009-05-212014-12-17T15:18:11Z2009-02-27ALVES, Milena Ferreira. caracterização in situ e estrutura genética de populações de Gossypium mustelinum. 2009. 98 f. Dissertação (Mestrado em Genética e Biologia Molecular) - Universidade Federal do Rio Grande do Norte, Natal, 2009.https://repositorio.ufrn.br/jspui/handle/123456789/16769Gossypium mustelinum Miers ex Watt is the only cotton species native from Brazil. It is endemic of the semi-arid region from North-east of the country, where it occur near from resilient water sources. The threats to the in situ conservation of the populations are caused by human interference in its habitat, mainly by excessive cattle graze and deforestation. Establish efficient strategies of in situ conservation depend on the accomplishment of a diagnosis of how the specie is found in its natural environment, and the knowledge about the genetic structure of the populations. The objectives of this work were i) to determine the in situ conditions of two populations present in rivers from basin of Rio Paraguaçu at the Bahia State, ii) to evaluate the structure and genetic variability presented in both populations, iii) to establish in situ and ex situ conservation strategies. It were realized collection in november 2007, when was realized in situ characterization of G. mustelinum. SSR markers were used for analyze 218 genotypes deriving from two populations of the G. mustelinum, localized at Tocó river and the Capivara river. The allelic frequencies, the heterozigosity and the F statics were estimated. All the plants were classified as wild and natives, and there was no evidence of the use the plants or its parts. The populations showed different conservation conditions in situ. Few plantlets were found in sites with excessive cattle feed, an indication that the damages in young plants should be high enough to compromise the renovation of the populations. On the other hand, populations were well preserved when the anthropic damages was low or inexistent. The 14 SSR primer pairs amplified 17 loci with a medium number of 5 alleles per locus (a total of 85 alleles). The high level of endogamy estimated (FIS=0,808) and the low observed heterozygosity (H0=0,093) were indicatives that the populations reproduce mainly by selfing, geitonogamy and crosses between related individuals. The genetic diversity was high (HE=0,482) and the differentiation between the populations was very high (FST=0,328). At least two sites from both populations of G. mustelinum must be preserved to achieve suitable in situ conservation. Actions that preserve the gallery forest and keep the cattle away should implemented, and could be as simple as erecting a fence. It is not possible anticipated if the in situ preservation will be possible. Therefore collections and ex situ preservation of representative specimens are essential to conserve the genetic diversity of native G. mustelinumGossypium mustelinum Miers ex Watt é a única espécie de algodão nativa do Brasil. É uma espécie endêmica do semi-árido nordestino do país, ocorrendo próximo a fontes de água mais duradouras. Os riscos para conservação in situ das populações estão associados a interferência humana em seu habitat, principalmente devido ao excessivo pastejo por bovinos e caprinos, além do desmatamento em matas ciliares. Estabelecer estratégias eficazes de conservação in situ depende da realização de um diagnóstico da espécie em seu ambiente natural, e do conhecimento acerca da estrutura genética das populações. Os objetivos deste trabalho foram: i) determinar as condições in situ de duas populações presentes em rios da bacia do Rio Paraguaçu no estado da Bahia, ii) avaliar a estrutura e variabilidade genética presente em ambas as populações, iii) e estabelecer estratégias de conservação in situ e ex situ. Foram realizadas coletas em novembro de 2007, quando foi realizada a caracterização in situ de G. mustelinum. Marcadores SSR foram usados para analisar 218 genótipos de duas populações, localizadas nos rios Tocó e Capivara. As freqüências alélicas, a heterozigozidade e as estatísticas F foram estimadas. Todas as plantas foram classificadas como selvagens e nativas, e nenhuma evidencia de exploração antrópica foi observada. As populações apresentavam diferentes condições de conservação in situ. Poucas plantas foram encontradas em locais onde havia prática de pecuária extensiva, um indício de que os danos causados a plantas jovens sejam maiores, comprometendo a renovação das populações. Em contraste, populações foram encontradas em adequadas condições de preservação quando os danos causados pela ação antrópica eram pequenos ou inexistentes. Os 14 pares de primers SSR amplificaram 17 locos com número médio de 5 alelos por loco (85 alelos no total). O alto índice de endogamia estimado (FIS=0,808) e a baixa quantidade de heterozigotos (Ho=0,093) indicam que as populações propagam-se preferencialmente por autofecundação, geitonogamia e cruzamentos entre indivíduos aparentados. A diversidade genética total foi alta (HE=0,482) e a diferenciação entre as populações foi muito elevada (FST=0,328). No mínimo duas sub-populações devem ser preservadas em cada rio para uma adequada conservação in situ. Ações de preservação das matas ciliares e que impeçam o acesso do gado às populações devem ser implementadas, erguendo cercas próximas as plantas. Não é possível prever se as sugestões propostas para preservação in situ serão implementadas. Coletas devem ser intensificadas e ações para preservação ex situ devem ser realizadas para conservação da diversidade genética presente nesta espécie nativa do BrasilCoordenação de Aperfeiçoamento de Pessoal de Nível Superiorapplication/pdfporUniversidade Federal do Rio Grande do NortePrograma de Pós-Graduação em Genética e Biologia MolecularUFRNBRGenética e Biologia MolecularGossypium mustelinumConservaçãoMarcadores SSRGossypium mustelinumConservationSSR markersCNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULARcaracterização in situ e estrutura genética de populações de Gossypium mustelinuminfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRNinstname:Universidade Federal do Rio Grande do Norte (UFRN)instacron:UFRNORIGINALMilenaFA.pdfapplication/pdf1164866https://repositorio.ufrn.br/bitstream/123456789/16769/1/MilenaFA.pdf847b20831744976f00087ef23a650106MD51TEXTMilenaFA.pdf.txtMilenaFA.pdf.txtExtracted texttext/plain186094https://repositorio.ufrn.br/bitstream/123456789/16769/6/MilenaFA.pdf.txt1d46f449369298e792a3d20fe9ca50e4MD56THUMBNAILMilenaFA.pdf.jpgMilenaFA.pdf.jpgIM Thumbnailimage/jpeg3352https://repositorio.ufrn.br/bitstream/123456789/16769/7/MilenaFA.pdf.jpgd4d18103dd6d20aa9b90615d58c9be2cMD57123456789/167692017-11-04 05:36:37.059oai:https://repositorio.ufrn.br:123456789/16769Repositório de PublicaçõesPUBhttp://repositorio.ufrn.br/oai/opendoar:2017-11-04T08:36:37Repositório Institucional da UFRN - Universidade Federal do Rio Grande do Norte (UFRN)false
dc.title.por.fl_str_mv caracterização in situ e estrutura genética de populações de Gossypium mustelinum
title caracterização in situ e estrutura genética de populações de Gossypium mustelinum
spellingShingle caracterização in situ e estrutura genética de populações de Gossypium mustelinum
Alves, Milena Ferreira
Gossypium mustelinum
Conservação
Marcadores SSR
Gossypium mustelinum
Conservation
SSR markers
CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULAR
title_short caracterização in situ e estrutura genética de populações de Gossypium mustelinum
title_full caracterização in situ e estrutura genética de populações de Gossypium mustelinum
title_fullStr caracterização in situ e estrutura genética de populações de Gossypium mustelinum
title_full_unstemmed caracterização in situ e estrutura genética de populações de Gossypium mustelinum
title_sort caracterização in situ e estrutura genética de populações de Gossypium mustelinum
author Alves, Milena Ferreira
author_facet Alves, Milena Ferreira
author_role author
dc.contributor.authorID.por.fl_str_mv
dc.contributor.authorLattes.por.fl_str_mv http://lattes.cnpq.br/9738264326712552
dc.contributor.advisorID.por.fl_str_mv
dc.contributor.advisorLattes.por.fl_str_mv http://lattes.cnpq.br/2493954146850909
dc.contributor.advisor-co1ID.por.fl_str_mv
dc.contributor.referees1.pt_BR.fl_str_mv Freire, Eleusio Curvelo
dc.contributor.referees1ID.por.fl_str_mv
dc.contributor.referees1Lattes.por.fl_str_mv http://lattes.cnpq.br/2400072395820099
dc.contributor.referees2.pt_BR.fl_str_mv Nóbrega, Márcia Barreto de Medeiros
dc.contributor.referees2ID.por.fl_str_mv
dc.contributor.author.fl_str_mv Alves, Milena Ferreira
dc.contributor.advisor-co1.fl_str_mv Hoffmann, Lúcia Vieira
dc.contributor.advisor-co1Lattes.fl_str_mv http://lattes.cnpq.br/1552220402943995
dc.contributor.advisor1.fl_str_mv Barroso, Paulo Augusto Vianna
contributor_str_mv Hoffmann, Lúcia Vieira
Barroso, Paulo Augusto Vianna
dc.subject.por.fl_str_mv Gossypium mustelinum
Conservação
Marcadores SSR
topic Gossypium mustelinum
Conservação
Marcadores SSR
Gossypium mustelinum
Conservation
SSR markers
CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULAR
dc.subject.eng.fl_str_mv Gossypium mustelinum
Conservation
SSR markers
dc.subject.cnpq.fl_str_mv CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULAR
description Gossypium mustelinum Miers ex Watt is the only cotton species native from Brazil. It is endemic of the semi-arid region from North-east of the country, where it occur near from resilient water sources. The threats to the in situ conservation of the populations are caused by human interference in its habitat, mainly by excessive cattle graze and deforestation. Establish efficient strategies of in situ conservation depend on the accomplishment of a diagnosis of how the specie is found in its natural environment, and the knowledge about the genetic structure of the populations. The objectives of this work were i) to determine the in situ conditions of two populations present in rivers from basin of Rio Paraguaçu at the Bahia State, ii) to evaluate the structure and genetic variability presented in both populations, iii) to establish in situ and ex situ conservation strategies. It were realized collection in november 2007, when was realized in situ characterization of G. mustelinum. SSR markers were used for analyze 218 genotypes deriving from two populations of the G. mustelinum, localized at Tocó river and the Capivara river. The allelic frequencies, the heterozigosity and the F statics were estimated. All the plants were classified as wild and natives, and there was no evidence of the use the plants or its parts. The populations showed different conservation conditions in situ. Few plantlets were found in sites with excessive cattle feed, an indication that the damages in young plants should be high enough to compromise the renovation of the populations. On the other hand, populations were well preserved when the anthropic damages was low or inexistent. The 14 SSR primer pairs amplified 17 loci with a medium number of 5 alleles per locus (a total of 85 alleles). The high level of endogamy estimated (FIS=0,808) and the low observed heterozygosity (H0=0,093) were indicatives that the populations reproduce mainly by selfing, geitonogamy and crosses between related individuals. The genetic diversity was high (HE=0,482) and the differentiation between the populations was very high (FST=0,328). At least two sites from both populations of G. mustelinum must be preserved to achieve suitable in situ conservation. Actions that preserve the gallery forest and keep the cattle away should implemented, and could be as simple as erecting a fence. It is not possible anticipated if the in situ preservation will be possible. Therefore collections and ex situ preservation of representative specimens are essential to conserve the genetic diversity of native G. mustelinum
publishDate 2009
dc.date.available.fl_str_mv 2009-05-21
2014-12-17T15:18:11Z
dc.date.issued.fl_str_mv 2009-02-27
dc.date.accessioned.fl_str_mv 2014-12-17T15:18:11Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
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dc.identifier.citation.fl_str_mv ALVES, Milena Ferreira. caracterização in situ e estrutura genética de populações de Gossypium mustelinum. 2009. 98 f. Dissertação (Mestrado em Genética e Biologia Molecular) - Universidade Federal do Rio Grande do Norte, Natal, 2009.
dc.identifier.uri.fl_str_mv https://repositorio.ufrn.br/jspui/handle/123456789/16769
identifier_str_mv ALVES, Milena Ferreira. caracterização in situ e estrutura genética de populações de Gossypium mustelinum. 2009. 98 f. Dissertação (Mestrado em Genética e Biologia Molecular) - Universidade Federal do Rio Grande do Norte, Natal, 2009.
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dc.publisher.department.fl_str_mv Genética e Biologia Molecular
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