Genetic divergence among Dimorphandra spp. accessions using RAPD markers

Detalhes bibliográficos
Autor(a) principal: Sudré,Cláudia Pombo
Data de Publicação: 2011
Outros Autores: Rodrigues,Rosana, Gonçalves,Leandro Simões Azeredo, Martins,Ernane Ronie, Pereira,Messias Gonzaga, Santos,Marilene Hilma dos
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Ciência Rural
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782011000400010
Resumo: The genus Dimorphandra has distinguish relevance considering either medicinal or biodiversity aspects because it includes two species that are economically important flavonoids sources for pharmachemical industry (D. mollis Benth. and D. gardneriana Tul.), and species endemic to Brazil, such as D. jorgei Silva and D. wilsonii Rizz., threatened by extinction. In order to evaluate variability among accessions of D. mollis (fava-d'anta), D. gardneriana and D. wilsonii, it was collected fruit from individual plants from three Brazilian states in a total of 57 accessions, which were analyzed with RAPD markers. It was used 20 seeds per progeny; the DNA was extracted from fully-formed young leaves, which were collected in bulk. The data were analyzed using a binary matrix, in which the score one represented presence of a band and zero, absence. The similarity matrix was developed by using the arithmetic complement of the Jaccard index, later grouped based on the Neighbor Joining algorithm. It was found considerable intra and inter specific variability in Dimorphandra spp., which were separated into four groups. Though genetic variability was found, the collecting trips showed that most of these areas are subject to loss of genetic resources of fava-d'anta due to the following factors: continuous anthropic activity, propensity for natural fires, and loss of natural seed dispersers (large fruit-eating mammals). Therefore, protections of these areas and ex situ conservation are essentials for the maintenance of genetic variability of these species.
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spelling Genetic divergence among Dimorphandra spp. accessions using RAPD markersfava-d'antmolecular characterizationplant genetic resourcegermoplasmThe genus Dimorphandra has distinguish relevance considering either medicinal or biodiversity aspects because it includes two species that are economically important flavonoids sources for pharmachemical industry (D. mollis Benth. and D. gardneriana Tul.), and species endemic to Brazil, such as D. jorgei Silva and D. wilsonii Rizz., threatened by extinction. In order to evaluate variability among accessions of D. mollis (fava-d'anta), D. gardneriana and D. wilsonii, it was collected fruit from individual plants from three Brazilian states in a total of 57 accessions, which were analyzed with RAPD markers. It was used 20 seeds per progeny; the DNA was extracted from fully-formed young leaves, which were collected in bulk. The data were analyzed using a binary matrix, in which the score one represented presence of a band and zero, absence. The similarity matrix was developed by using the arithmetic complement of the Jaccard index, later grouped based on the Neighbor Joining algorithm. It was found considerable intra and inter specific variability in Dimorphandra spp., which were separated into four groups. Though genetic variability was found, the collecting trips showed that most of these areas are subject to loss of genetic resources of fava-d'anta due to the following factors: continuous anthropic activity, propensity for natural fires, and loss of natural seed dispersers (large fruit-eating mammals). Therefore, protections of these areas and ex situ conservation are essentials for the maintenance of genetic variability of these species.Universidade Federal de Santa Maria2011-04-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782011000400010Ciência Rural v.41 n.4 2011reponame:Ciência Ruralinstname:Universidade Federal de Santa Maria (UFSM)instacron:UFSM10.1590/S0103-84782011005000024info:eu-repo/semantics/openAccessSudré,Cláudia PomboRodrigues,RosanaGonçalves,Leandro Simões AzeredoMartins,Ernane RoniePereira,Messias GonzagaSantos,Marilene Hilma doseng2011-10-13T00:00:00ZRevista
dc.title.none.fl_str_mv Genetic divergence among Dimorphandra spp. accessions using RAPD markers
title Genetic divergence among Dimorphandra spp. accessions using RAPD markers
spellingShingle Genetic divergence among Dimorphandra spp. accessions using RAPD markers
Sudré,Cláudia Pombo
fava-d'ant
molecular characterization
plant genetic resource
germoplasm
title_short Genetic divergence among Dimorphandra spp. accessions using RAPD markers
title_full Genetic divergence among Dimorphandra spp. accessions using RAPD markers
title_fullStr Genetic divergence among Dimorphandra spp. accessions using RAPD markers
title_full_unstemmed Genetic divergence among Dimorphandra spp. accessions using RAPD markers
title_sort Genetic divergence among Dimorphandra spp. accessions using RAPD markers
author Sudré,Cláudia Pombo
author_facet Sudré,Cláudia Pombo
Rodrigues,Rosana
Gonçalves,Leandro Simões Azeredo
Martins,Ernane Ronie
Pereira,Messias Gonzaga
Santos,Marilene Hilma dos
author_role author
author2 Rodrigues,Rosana
Gonçalves,Leandro Simões Azeredo
Martins,Ernane Ronie
Pereira,Messias Gonzaga
Santos,Marilene Hilma dos
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Sudré,Cláudia Pombo
Rodrigues,Rosana
Gonçalves,Leandro Simões Azeredo
Martins,Ernane Ronie
Pereira,Messias Gonzaga
Santos,Marilene Hilma dos
dc.subject.por.fl_str_mv fava-d'ant
molecular characterization
plant genetic resource
germoplasm
topic fava-d'ant
molecular characterization
plant genetic resource
germoplasm
description The genus Dimorphandra has distinguish relevance considering either medicinal or biodiversity aspects because it includes two species that are economically important flavonoids sources for pharmachemical industry (D. mollis Benth. and D. gardneriana Tul.), and species endemic to Brazil, such as D. jorgei Silva and D. wilsonii Rizz., threatened by extinction. In order to evaluate variability among accessions of D. mollis (fava-d'anta), D. gardneriana and D. wilsonii, it was collected fruit from individual plants from three Brazilian states in a total of 57 accessions, which were analyzed with RAPD markers. It was used 20 seeds per progeny; the DNA was extracted from fully-formed young leaves, which were collected in bulk. The data were analyzed using a binary matrix, in which the score one represented presence of a band and zero, absence. The similarity matrix was developed by using the arithmetic complement of the Jaccard index, later grouped based on the Neighbor Joining algorithm. It was found considerable intra and inter specific variability in Dimorphandra spp., which were separated into four groups. Though genetic variability was found, the collecting trips showed that most of these areas are subject to loss of genetic resources of fava-d'anta due to the following factors: continuous anthropic activity, propensity for natural fires, and loss of natural seed dispersers (large fruit-eating mammals). Therefore, protections of these areas and ex situ conservation are essentials for the maintenance of genetic variability of these species.
publishDate 2011
dc.date.none.fl_str_mv 2011-04-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782011000400010
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782011000400010
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S0103-84782011005000024
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Universidade Federal de Santa Maria
publisher.none.fl_str_mv Universidade Federal de Santa Maria
dc.source.none.fl_str_mv Ciência Rural v.41 n.4 2011
reponame:Ciência Rural
instname:Universidade Federal de Santa Maria (UFSM)
instacron:UFSM
instname_str Universidade Federal de Santa Maria (UFSM)
instacron_str UFSM
institution UFSM
reponame_str Ciência Rural
collection Ciência Rural
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repository.mail.fl_str_mv
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