Near-complete genome sequence and seed transmission evaluation of Physalis rugose mosaic virus from southern Brazil

Detalhes bibliográficos
Autor(a) principal: Savi,Amanda
Data de Publicação: 2021
Outros Autores: Gorayeb,Eduardo Silva, Nascimento,Samara Campos, Faria,Caroline Bolson de, Fajardo,Thor Vinícius Martins, Nhani Junior,Antônio, Bogo,Amauri, Casa,Ricardo Trezzi, Silva,Fabio Nascimento da
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Ciência Rural
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782021000400151
Resumo: ABSTRACT: Physalis rugose mosaic virus (PhyRMV) causes severe damage to Physalis peruviana L., affecting vegetative parameters, fruit quantity and quality. The aim of this study was to perform a molecular characterization of PhyRMV associated with P. peruviana from commercial fields in the municipality of Lages, Santa Catarina State, Southern Brazil, and to evaluate its transmission by seeds. Plants displaying mosaic, dwarfism, and leaf malformation symptoms were collected from P. peruviana. Double-stranded RNA was extracted and submitted to cDNA library synthesis and high-throughput sequencing (HTS). For the virus transmission assay, seeds from PhyRMV-infected plants were used, and viral infection in seedlings was verified using symptomatic and molecular diagnosis. PhyRMV RNA has 4162 nucleotides (nts) and a genomic organization similar to that of other sobemoviruses and shares 97% nt identity with the previously characterized PhyRMV Piracicaba isolate. Results indicated the unlikely transmission of PhyRMV by physalis seeds.
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spelling Near-complete genome sequence and seed transmission evaluation of Physalis rugose mosaic virus from southern BrazilcharacterizationPhyRMVSobemovirusABSTRACT: Physalis rugose mosaic virus (PhyRMV) causes severe damage to Physalis peruviana L., affecting vegetative parameters, fruit quantity and quality. The aim of this study was to perform a molecular characterization of PhyRMV associated with P. peruviana from commercial fields in the municipality of Lages, Santa Catarina State, Southern Brazil, and to evaluate its transmission by seeds. Plants displaying mosaic, dwarfism, and leaf malformation symptoms were collected from P. peruviana. Double-stranded RNA was extracted and submitted to cDNA library synthesis and high-throughput sequencing (HTS). For the virus transmission assay, seeds from PhyRMV-infected plants were used, and viral infection in seedlings was verified using symptomatic and molecular diagnosis. PhyRMV RNA has 4162 nucleotides (nts) and a genomic organization similar to that of other sobemoviruses and shares 97% nt identity with the previously characterized PhyRMV Piracicaba isolate. Results indicated the unlikely transmission of PhyRMV by physalis seeds.Universidade Federal de Santa Maria2021-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782021000400151Ciência Rural v.51 n.4 2021reponame:Ciência Ruralinstname:Universidade Federal de Santa Maria (UFSM)instacron:UFSM10.1590/0103-8478cr20200702info:eu-repo/semantics/openAccessSavi,AmandaGorayeb,Eduardo SilvaNascimento,Samara CamposFaria,Caroline Bolson deFajardo,Thor Vinícius MartinsNhani Junior,AntônioBogo,AmauriCasa,Ricardo TrezziSilva,Fabio Nascimento daeng2021-02-19T00:00:00ZRevista
dc.title.none.fl_str_mv Near-complete genome sequence and seed transmission evaluation of Physalis rugose mosaic virus from southern Brazil
title Near-complete genome sequence and seed transmission evaluation of Physalis rugose mosaic virus from southern Brazil
spellingShingle Near-complete genome sequence and seed transmission evaluation of Physalis rugose mosaic virus from southern Brazil
Savi,Amanda
characterization
PhyRMV
Sobemovirus
title_short Near-complete genome sequence and seed transmission evaluation of Physalis rugose mosaic virus from southern Brazil
title_full Near-complete genome sequence and seed transmission evaluation of Physalis rugose mosaic virus from southern Brazil
title_fullStr Near-complete genome sequence and seed transmission evaluation of Physalis rugose mosaic virus from southern Brazil
title_full_unstemmed Near-complete genome sequence and seed transmission evaluation of Physalis rugose mosaic virus from southern Brazil
title_sort Near-complete genome sequence and seed transmission evaluation of Physalis rugose mosaic virus from southern Brazil
author Savi,Amanda
author_facet Savi,Amanda
Gorayeb,Eduardo Silva
Nascimento,Samara Campos
Faria,Caroline Bolson de
Fajardo,Thor Vinícius Martins
Nhani Junior,Antônio
Bogo,Amauri
Casa,Ricardo Trezzi
Silva,Fabio Nascimento da
author_role author
author2 Gorayeb,Eduardo Silva
Nascimento,Samara Campos
Faria,Caroline Bolson de
Fajardo,Thor Vinícius Martins
Nhani Junior,Antônio
Bogo,Amauri
Casa,Ricardo Trezzi
Silva,Fabio Nascimento da
author2_role author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Savi,Amanda
Gorayeb,Eduardo Silva
Nascimento,Samara Campos
Faria,Caroline Bolson de
Fajardo,Thor Vinícius Martins
Nhani Junior,Antônio
Bogo,Amauri
Casa,Ricardo Trezzi
Silva,Fabio Nascimento da
dc.subject.por.fl_str_mv characterization
PhyRMV
Sobemovirus
topic characterization
PhyRMV
Sobemovirus
description ABSTRACT: Physalis rugose mosaic virus (PhyRMV) causes severe damage to Physalis peruviana L., affecting vegetative parameters, fruit quantity and quality. The aim of this study was to perform a molecular characterization of PhyRMV associated with P. peruviana from commercial fields in the municipality of Lages, Santa Catarina State, Southern Brazil, and to evaluate its transmission by seeds. Plants displaying mosaic, dwarfism, and leaf malformation symptoms were collected from P. peruviana. Double-stranded RNA was extracted and submitted to cDNA library synthesis and high-throughput sequencing (HTS). For the virus transmission assay, seeds from PhyRMV-infected plants were used, and viral infection in seedlings was verified using symptomatic and molecular diagnosis. PhyRMV RNA has 4162 nucleotides (nts) and a genomic organization similar to that of other sobemoviruses and shares 97% nt identity with the previously characterized PhyRMV Piracicaba isolate. Results indicated the unlikely transmission of PhyRMV by physalis seeds.
publishDate 2021
dc.date.none.fl_str_mv 2021-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782021000400151
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782021000400151
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/0103-8478cr20200702
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Universidade Federal de Santa Maria
publisher.none.fl_str_mv Universidade Federal de Santa Maria
dc.source.none.fl_str_mv Ciência Rural v.51 n.4 2021
reponame:Ciência Rural
instname:Universidade Federal de Santa Maria (UFSM)
instacron:UFSM
instname_str Universidade Federal de Santa Maria (UFSM)
instacron_str UFSM
institution UFSM
reponame_str Ciência Rural
collection Ciência Rural
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repository.mail.fl_str_mv
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