Genetic variability in physic nuts cultivated in Northeastern Brazil
Autor(a) principal: | |
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Data de Publicação: | 2013 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Ciência Rural |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782013000600006 |
Resumo: | This research had as objective to characterize genetically individuals of physic nut cultivated in experimental areas in Sergipe, Brazil by means of RAPD molecular markers. Leaves of 40 individuals were collected and DNA was isolated using CTAB 2% method. Were used 30 primers RAPD for DNA amplification, and this data was used to estimate the genetic similarity among the pairs of individuals, using Jaccard coefficient, and group them out for the UPGMA method. Also, the genetic structure and diversity of the populations were assessed using AMOVA. Of the 100 fragments generated, 29 of were polymorphic. A similarity average of 0.54 among the individuals was found and the amplitude similarities varied from 0.18 to 1.00. One of them (U5) was unit clusters and formed by the most divergent individuals. AMOVA indicated that there is more variation within (63%) the population. In conclusion, it was possible verify genetic variability in physic nut using RAPD markers at these experimental areas. |
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Ciência rural (Online) |
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Genetic variability in physic nuts cultivated in Northeastern BrazilJatropha curcas L.RAPDgenetic diversityThis research had as objective to characterize genetically individuals of physic nut cultivated in experimental areas in Sergipe, Brazil by means of RAPD molecular markers. Leaves of 40 individuals were collected and DNA was isolated using CTAB 2% method. Were used 30 primers RAPD for DNA amplification, and this data was used to estimate the genetic similarity among the pairs of individuals, using Jaccard coefficient, and group them out for the UPGMA method. Also, the genetic structure and diversity of the populations were assessed using AMOVA. Of the 100 fragments generated, 29 of were polymorphic. A similarity average of 0.54 among the individuals was found and the amplitude similarities varied from 0.18 to 1.00. One of them (U5) was unit clusters and formed by the most divergent individuals. AMOVA indicated that there is more variation within (63%) the population. In conclusion, it was possible verify genetic variability in physic nut using RAPD markers at these experimental areas.Universidade Federal de Santa Maria2013-06-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782013000600006Ciência Rural v.43 n.6 2013reponame:Ciência Ruralinstname:Universidade Federal de Santa Maria (UFSM)instacron:UFSM10.1590/S0103-84782013005000060info:eu-repo/semantics/openAccessOliveira,Vanice DiasRabbani,Allivia Rouse CarregosaSilva,Ana Veruska Cruz daLédo,Ana da Silvaeng2014-02-21T00:00:00ZRevista |
dc.title.none.fl_str_mv |
Genetic variability in physic nuts cultivated in Northeastern Brazil |
title |
Genetic variability in physic nuts cultivated in Northeastern Brazil |
spellingShingle |
Genetic variability in physic nuts cultivated in Northeastern Brazil Oliveira,Vanice Dias Jatropha curcas L. RAPD genetic diversity |
title_short |
Genetic variability in physic nuts cultivated in Northeastern Brazil |
title_full |
Genetic variability in physic nuts cultivated in Northeastern Brazil |
title_fullStr |
Genetic variability in physic nuts cultivated in Northeastern Brazil |
title_full_unstemmed |
Genetic variability in physic nuts cultivated in Northeastern Brazil |
title_sort |
Genetic variability in physic nuts cultivated in Northeastern Brazil |
author |
Oliveira,Vanice Dias |
author_facet |
Oliveira,Vanice Dias Rabbani,Allivia Rouse Carregosa Silva,Ana Veruska Cruz da Lédo,Ana da Silva |
author_role |
author |
author2 |
Rabbani,Allivia Rouse Carregosa Silva,Ana Veruska Cruz da Lédo,Ana da Silva |
author2_role |
author author author |
dc.contributor.author.fl_str_mv |
Oliveira,Vanice Dias Rabbani,Allivia Rouse Carregosa Silva,Ana Veruska Cruz da Lédo,Ana da Silva |
dc.subject.por.fl_str_mv |
Jatropha curcas L. RAPD genetic diversity |
topic |
Jatropha curcas L. RAPD genetic diversity |
description |
This research had as objective to characterize genetically individuals of physic nut cultivated in experimental areas in Sergipe, Brazil by means of RAPD molecular markers. Leaves of 40 individuals were collected and DNA was isolated using CTAB 2% method. Were used 30 primers RAPD for DNA amplification, and this data was used to estimate the genetic similarity among the pairs of individuals, using Jaccard coefficient, and group them out for the UPGMA method. Also, the genetic structure and diversity of the populations were assessed using AMOVA. Of the 100 fragments generated, 29 of were polymorphic. A similarity average of 0.54 among the individuals was found and the amplitude similarities varied from 0.18 to 1.00. One of them (U5) was unit clusters and formed by the most divergent individuals. AMOVA indicated that there is more variation within (63%) the population. In conclusion, it was possible verify genetic variability in physic nut using RAPD markers at these experimental areas. |
publishDate |
2013 |
dc.date.none.fl_str_mv |
2013-06-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782013000600006 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782013000600006 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/S0103-84782013005000060 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Universidade Federal de Santa Maria |
publisher.none.fl_str_mv |
Universidade Federal de Santa Maria |
dc.source.none.fl_str_mv |
Ciência Rural v.43 n.6 2013 reponame:Ciência Rural instname:Universidade Federal de Santa Maria (UFSM) instacron:UFSM |
instname_str |
Universidade Federal de Santa Maria (UFSM) |
instacron_str |
UFSM |
institution |
UFSM |
reponame_str |
Ciência Rural |
collection |
Ciência Rural |
repository.name.fl_str_mv |
|
repository.mail.fl_str_mv |
|
_version_ |
1749140544315981824 |